Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_L06
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    26   0.33 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    25   0.77 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    25   0.77 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    25   0.77 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.77 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    25   0.77 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    24   1.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.1  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   4.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   9.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.5  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 383 VFALVAVPSYVWYAYTPLEH 324
           +F  ++V  YV YA++P++H
Sbjct: 139 IFTYLSVTCYVTYAWSPIDH 158


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 236 HRNWRGGGSESRIYKGPTP 292
           H N R GGS+   YK P P
Sbjct: 304 HDNQRTGGSQILTYKNPKP 322


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 236 HRNWRGGGSESRIYKGPTP 292
           H N R GGS+   YK P P
Sbjct: 305 HDNQRTGGSQILTYKNPKP 323


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 236 HRNWRGGGSESRIYKGPTP 292
           H N R GGS+   YK P P
Sbjct: 305 HDNQRTGGSQILTYKNPKP 323


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 27  VXXFTSVSIRIVRHLCFHYHNFXFVHLF 110
           +   T ++  +  H+CF+ + + F H+F
Sbjct: 48  IYVLTILTSSVTLHVCFNSYMYAFTHIF 75


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 369 YERE-YNILVMDLLGPSLEDLFNFCTRQFTIK 461
           Y R+ YN+  M   G ++EDL +FC   +++K
Sbjct: 422 YSRDSYNLAGM---GETIEDLLHFCRTMYSMK 450


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 378 EYNILVMDLLGPSLEDLFNFCTRQFTIKTVLMLADQM 488
           +Y ++  DL    LE  F F ++  TIK    LA+ +
Sbjct: 158 KYRVVYTDLQRIELEKEFTFVSKYITIKRKSELAENL 194


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 645 CEPGCEGLCIXSRVQSRSCTAC 580
           C+   EG CI  +     C AC
Sbjct: 74  CKAKDEGSCIIDKTHRNQCRAC 95


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 645 CEPGCEGLCIXSRVQSRSCTAC 580
           C+   EG CI  +     C AC
Sbjct: 74  CKAKDEGSCIIDKTHRNQCRAC 95


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +3

Query: 291 PQLLYESRVYKMLQGGVGI 347
           PQ+ + SR+Y+M++ G+GI
Sbjct: 670 PQV-HASRIYRMIKLGLGI 687


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = -2

Query: 286 RAFVDSTFTATSSPVPMLIAKYISPNDPPPIFFDTLYFP 170
           + FV        S  P+L   +     PPP + D  Y P
Sbjct: 2   KGFVRQVKQEADSTSPLLTPPHNPAYSPPPSYCDPWYNP 40



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 390 LVMDLLGPSLEDLFNFCTRQFTIKTVLMLADQ 485
           LV   L P  + +  +C RQFT    L++ ++
Sbjct: 69  LVAGKLKPKRQFICKYCNRQFTKSYNLLIHER 100


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 81  NESTNDAQSEWKQR*NXKLHFTSIG 7
           N S N  + +WK     ++HF  IG
Sbjct: 464 NGSPNVDEPDWKPISKEEIHFIDIG 488


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +3

Query: 588 YMIDFGLAXKYXDLRTRAHISYREXKNLTGTAR 686
           Y +  G+  +Y D+     I   E KN+  + R
Sbjct: 187 YNLSLGIKLRYDDVNNLFRIEESEEKNIIVSLR 219


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 51  IRIVRHLCFHYHNFXFVHL 107
           I+  +  C++Y+ F  VHL
Sbjct: 107 IKKTKRYCYYYYAFFGVHL 125


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +3

Query: 588 YMIDFGLAXKYXDLRTRAHISYREXKNLTGTAR 686
           Y +  G+  +Y D+     I   E KN+  + R
Sbjct: 187 YNLSLGIKLRYDDVNNLFRIEESEEKNIIVSLR 219


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 372 EREYNILVMDLLGPSLE 422
           ERE N+L+ DL G + +
Sbjct: 18  ERERNVLIFDLGGGTFD 34


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +3

Query: 36  FTSVSIRIVRHLCFHYHNFXFVHLFCIKYVKMSF 137
           F   ++ ++  LC +Y       L CI Y   +F
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAF 153


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 610 ASPKSIMYSLLQCRPMP 560
           +SP+SI    L CR +P
Sbjct: 64  SSPRSISEDPLNCRDLP 80



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 365 RLRARIQYPGHGP 403
           R R    +PGHGP
Sbjct: 743 RSRQNSSFPGHGP 755


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,447
Number of Sequences: 336
Number of extensions: 3800
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)