Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_L02
         (475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   2.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   2.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   5.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   7.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   7.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +2

Query: 308 RWLPTRNRARSRRSCTVSNT 367
           +W+P ++ + ++R+ TVS T
Sbjct: 435 QWVPEKSTSTTQRTTTVSTT 454


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 210 NEGQEEESLAVRGKFSWVGPD 272
           N GQ+ ESL + GK  +  P+
Sbjct: 304 NTGQDPESLLINGKGQFRDPN 324


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 210 NEGQEEESLAVRGKFSWVGPD 272
           N GQ+ ESL + GK  +  P+
Sbjct: 304 NTGQDPESLLINGKGQFRDPN 324


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 273 GVTYTVTFVADEDGYQP 323
           G TY  T  +D DG+ P
Sbjct: 21  GTTYKYTGCSDNDGFLP 37


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 39  KMKLLLALCLVGIVAASRPPGEAQLTSYENVHNGR 143
           ++++  ALCL      S+PP E +  + +  +  R
Sbjct: 250 RIEIAHALCLTNKNLVSKPPHEVEKRAQDGQYEYR 284


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 338 SRRSCTVSNTSFSCRLN 388
           SR SC  SNTS    LN
Sbjct: 235 SRSSCLGSNTSSMLSLN 251


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 338 SRRSCTVSNTSFSCRLN 388
           SR SC  SNTS    LN
Sbjct: 24  SRSSCLGSNTSSMLSLN 40


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 338 SRRSCTVSNTSFSCRLN 388
           SR SC  SNTS    LN
Sbjct: 24  SRSSCLGSNTSSMLSLN 40


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 338 SRRSCTVSNTSFSCRLN 388
           SR SC  SNTS    LN
Sbjct: 235 SRSSCLGSNTSSMLSLN 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,540
Number of Sequences: 336
Number of extensions: 2480
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)