Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_L02
         (475 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64846-8|AAG24109.1|  331|Caenorhabditis elegans Serpentine rece...    30   0.98 
U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine rece...    30   0.98 
AF003148-6|AAB54210.2|  306|Caenorhabditis elegans Cathepsin z p...    29   2.3  
Z73972-3|CAA98259.1|  305|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AF040648-1|AAK21412.1|  519|Caenorhabditis elegans Hypothetical ...    27   5.2  
AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical...    27   6.9  
AL132948-41|CAC51075.1|  129|Caenorhabditis elegans Hypothetical...    27   6.9  
AC087079-16|AAO12401.2|  509|Caenorhabditis elegans Hypothetical...    27   6.9  

>U64846-8|AAG24109.1|  331|Caenorhabditis elegans Serpentine
           receptor, class t protein19 protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 344 AGTLLYFWLVTIFISHKSHGIGNAVWTHPRKFTSNSQGFFFLALV 210
           AG  +YF+L + F+    +G+G  + T P  FT     +FF  +V
Sbjct: 158 AGNKIYFFLFSFFV----YGVGAGILTKPVIFTPTHMSWFFDPMV 198


>U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine
           receptor, class t protein20 protein.
          Length = 336

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 344 AGTLLYFWLVTIFISHKSHGIGNAVWTHPRKFTSNSQGFFFLALV 210
           AG  +YF+L + F+    +G+G  + T P  FT     +FF  +V
Sbjct: 158 AGNKIYFFLFSFFV----YGVGAGILTKPVIFTPTHMSWFFDPMV 198


>AF003148-6|AAB54210.2|  306|Caenorhabditis elegans Cathepsin z
           protein 1 protein.
          Length = 306

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +3

Query: 48  LLLALCLVGIVAASRPPGEAQLTSYENVHNGRGNYRFGYSQSDGTVFEQEGTLK-NEGQE 224
           LLLALC + I+A+S   G+ +  S  N +N +G Y+       G VFE +   +  E ++
Sbjct: 6   LLLALCAICILASS-AYGKVRKYSNRNRYNLKGCYK-----QTGRVFEHKRYDRIYETED 59

Query: 225 EESLAVRGKFSWVGPDGVTY 284
            +S  +   + W   +G+ Y
Sbjct: 60  FDSEDLPKTWDWRDANGINY 79


>Z73972-3|CAA98259.1|  305|Caenorhabditis elegans Hypothetical
           protein F15H10.6 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 365 YC*RYSSAGTLLYFWLVTIFISHKSHGIGN 276
           +C     A T+LY ++V++FIS K+H + +
Sbjct: 2   WCVALVRAFTMLYLFIVSLFISSKAHHLAH 31


>AF040648-1|AAK21412.1|  519|Caenorhabditis elegans Hypothetical
           protein H19M22.3a protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
 Frame = -3

Query: 332 LYFWLVTIFI-SHKS-----HGIGNAVWTHPRKFTSNSQGFFFLAL 213
           LY WL++  + +H S     HG+G+   +   K +  S+GFF   L
Sbjct: 328 LYVWLMSQIVEAHNSSAQNNHGVGSITSSRTNKKSFKSEGFFLFQL 373


>AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3b protein.
          Length = 131

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +3

Query: 219 QEEESLAVRGKFSWVGPDGVTYTVTFVADEDGYQPEIEQ 335
           Q+ ++ A++      G +G+TYT+ +  D+  +  E+EQ
Sbjct: 43  QQNDANALKIGVRQKGCNGLTYTLEYAKDKQKFDEEVEQ 81


>AL132948-41|CAC51075.1|  129|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3a protein.
          Length = 129

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +3

Query: 219 QEEESLAVRGKFSWVGPDGVTYTVTFVADEDGYQPEIEQ 335
           Q+ ++ A++      G +G+TYT+ +  D+  +  E+EQ
Sbjct: 41  QQNDANALKIGVRQKGCNGLTYTLEYAKDKQKFDEEVEQ 79


>AC087079-16|AAO12401.2|  509|Caenorhabditis elegans Hypothetical
           protein Y37E3.16 protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -2

Query: 141 VHYAHFRSWLAEPHQVDGKRQLFPPNTMLITISFSIGFRSLFSI 10
           + +A F  WLA+P     +++  P +   +  +  I    +FSI
Sbjct: 379 ISFARFGLWLADPAITQIQQETIPESQRYMAFTVQIALNEVFSI 422


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,601,393
Number of Sequences: 27780
Number of extensions: 227674
Number of successful extensions: 530
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)