Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K22
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 31 0.90
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 31 1.2
Z81534-2|CAB04344.2| 226|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z83116-4|CAB05562.1| 287|Caenorhabditis elegans Hypothetical pr... 28 6.4
AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical... 28 6.4
Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 28 8.4
U64609-6|AAB04603.1| 194|Caenorhabditis elegans Hypothetical pr... 28 8.4
U40802-11|AAK19013.1| 194|Caenorhabditis elegans Hypothetical p... 28 8.4
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical
protein K07G5.1 protein.
Length = 998
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 278 QAMHLLDSLRRAIHLLDSLH-RAIHLLDSLHRTMHFLDTLQQAISHH 415
+A+H++ IHL D +H + I++ S+H +H L A+ H+
Sbjct: 80 KAIHVISEEELVIHLDDGVHKKKINIKCSIHPAVHLARQLLSAVKHY 126
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 376 AFSGHSSAS-YQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDGQGSAGL 552
++SG SS+S Y S S +Y P+ +S+ D +S + + YS PS+S G +
Sbjct: 236 SYSGSSSSSSYSSSDSSSYSSYTPSISSNSDYTSYS-PSYYSYSSYSPSYSSYGSSYSPS 294
Query: 553 QYAS 564
Y++
Sbjct: 295 YYSN 298
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 382 SGHSSASYQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDGQGSAGLQYA 561
S SY PSY S +Y P+ +S+G + S + + Y G ++ G G Y+
Sbjct: 263 SNSDYTSYSPSYY-SYSSYSPSYSSYGSSYSPSYYSNYYGGYNNYGYNNYGYGYNNNYYS 321
Query: 562 SQEYPANGH 588
Y N +
Sbjct: 322 GNYYCCNSY 330
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +1
Query: 376 AFSGHSSASYQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDGQGSAG 549
AFS +P Q S + P+ S G + A + GGIKP GSAG
Sbjct: 1243 AFSDTQQMMRKPIRQSSQTSAGPSQGSSGGLAGAVASAAAASGGIKPVAKKSSAGSAG 1300
>Z81534-2|CAB04344.2| 226|Caenorhabditis elegans Hypothetical
protein F37H8.3 protein.
Length = 226
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 230 RINEKPLQAMYMDTLHQAMHLLDSLRRAIHLLDSLHRAIHLLD 358
R+ KP + +++D LH+ + + L L++ + +AIH L+
Sbjct: 176 RLGVKPEEIVFLDDLHENIEAAEKLGWNTILVEDIEKAIHELE 218
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 370 NYAFSGHSSASYQPSYQISTQNYQPATNSHGDASS 474
NY GH S SYQPSY Y SH S+
Sbjct: 193 NYG-QGHDSESYQPSYYQPKPKYYGGHQSHYQPSA 226
>Z83116-4|CAB05562.1| 287|Caenorhabditis elegans Hypothetical
protein M01B2.4 protein.
Length = 287
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 315 YIFWTVSIELYIFWTVSIELCIFWTLFSKLSA--IISN 422
+I+W +L F+T+S+ +CI + L LSA II N
Sbjct: 44 FIYWKFGADL--FYTLSLSICISYYLLMSLSANFIIKN 79
>AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical
protein H20J04.1 protein.
Length = 843
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -1
Query: 406 DSLLKSVQKMHSSMETVQKMYSSMETVQKMYSS-TETVQQMHSLMK 272
D+LLK++Q + S ++ ++++ET YS +T++ + SL+K
Sbjct: 342 DALLKTLQPLFDSDSVIKTFWTALETYD--YSKIADTIKNLDSLLK 385
>Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical
protein ZK822.5b protein.
Length = 431
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 568 EYPANGHATIQLAPITLQPTHGAGGL-XSGDISQIMNQLSHXLNSGALSL 714
E + H TI A LQPT G GL S +S ++ LS +NS A ++
Sbjct: 176 EVKESDHITISFARDILQPTPGLFGLYVSCIMSATLSTLSSGMNSMAAAI 225
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 568 EYPANGHATIQLAPITLQPTHGAGGL-XSGDISQIMNQLSHXLNSGALSL 714
E + H TI A LQPT G GL S +S ++ LS +NS A ++
Sbjct: 322 EVKESDHITISFARDILQPTPGLFGLYVSCIMSATLSTLSSGMNSMAAAI 371
>U64609-6|AAB04603.1| 194|Caenorhabditis elegans Hypothetical
protein T28H11.7 protein.
Length = 194
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -2
Query: 759 AFTANVEXCNAVGWLQGKSSRIKXMAQLIHNLGDISRX*TACAVSGLQCDRSKLNSGMTI 580
A T E +A+G+ + + R+K + + + NL DIS+ + SG + S+L + +
Sbjct: 18 ATTLPAEVDDAMGYFKNLTPRVKDLHKSMTNLEDISKWQKKASFSGTLENYSRLGDKINV 77
>U40802-11|AAK19013.1| 194|Caenorhabditis elegans Hypothetical
protein ZC477.7 protein.
Length = 194
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -2
Query: 759 AFTANVEXCNAVGWLQGKSSRIKXMAQLIHNLGDISRX*TACAVSGLQCDRSKLNSGMTI 580
A T E +A+G+ + + R+K + + + NL DIS+ + SG + S+L + +
Sbjct: 18 ATTLPAEVDDAMGYFKNLTPRVKDLHKSMTNLEDISKWQKKASFSGTLENYSRLGDKINV 77
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 354 WTVSIELCIFWTLFSKLSAIISNQYTKLPTSHEF 455
WT IE CI +T++ L+ N Y L +++F
Sbjct: 240 WTYDIEQCIQFTVYPALTGPGDNPYNMLNRNNKF 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,138,437
Number of Sequences: 27780
Number of extensions: 358493
Number of successful extensions: 1024
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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