Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K20
(733 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1; B... 267 2e-70
UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like prot... 105 1e-21
UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1; B... 92 1e-17
UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16; Ne... 64 4e-09
UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM065... 63 8e-09
UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1, mi... 61 2e-08
UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6; Magnolio... 60 5e-08
UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 60 7e-08
UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza sat... 58 2e-07
UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 55 2e-06
UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase, chl... 54 3e-06
UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips ... 53 6e-06
UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl p... 50 4e-05
UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3; Dic... 50 8e-05
UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 48 2e-04
UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putati... 45 0.002
UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome sh... 45 0.002
UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma j... 44 0.003
UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 43 0.009
UniRef50_A5PJD2 Cluster: MGC152321 protein; n=6; Eutheria|Rep: M... 38 0.19
UniRef50_UPI0000DB7AE1 Cluster: PREDICTED: hypothetical protein;... 38 0.33
UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5; Dik... 38 0.33
UniRef50_Q5JWR5 Cluster: Protein dopey-1; n=25; Deuterostomia|Re... 38 0.33
UniRef50_A3GFK9 Cluster: Predicted protein; n=3; Saccharomycetal... 37 0.59
UniRef50_A5DBM0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;... 36 1.0
UniRef50_Q4SSX9 Cluster: Chromosome 8 SCAF14344, whole genome sh... 35 1.8
UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase , put... 35 2.4
UniRef50_Q9ZCE0 Cluster: Tyrosine recombinase xerC; n=10; Ricket... 35 2.4
UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putati... 34 3.1
UniRef50_A6UNE4 Cluster: ATPase; n=1; Methanococcus vannielii SB... 34 3.1
UniRef50_UPI0001509DE7 Cluster: hypothetical protein TTHERM_0028... 34 4.1
UniRef50_UPI0000499D14 Cluster: hypothetical protein 73.t00020; ... 33 5.5
UniRef50_O14207 Cluster: Uncharacterized protein C6B12.02c; n=1;... 33 5.5
UniRef50_A4YCB5 Cluster: Glycosyl transferase, family 2; n=7; Ga... 33 7.2
UniRef50_Q31Q84 Cluster: Phage late control gene D protein GPD; ... 33 9.5
UniRef50_A6GZT1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 2 -
Bombyx mori (Silk moth)
Length = 382
Score = 267 bits (654), Expect = 2e-70
Identities = 123/123 (100%), Positives = 123/123 (100%)
Frame = +2
Query: 233 MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN 412
MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN
Sbjct: 1 MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN 60
Query: 413 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 592
KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC
Sbjct: 61 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 120
Query: 593 VEM 601
VEM
Sbjct: 121 VEM 123
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 602 TLWRTSMGQHLDHVTGNRKTDYSSFTLDR 688
TLWRTSMGQHLDHVTGNRKTDYSSFTLDR
Sbjct: 193 TLWRTSMGQHLDHVTGNRKTDYSSFTLDR 221
>UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like
protein; n=2; Choristoneura fumiferana|Rep: Farnesyl
diphosphate synthase-like protein - Choristoneura
fumiferana (Spruce budworm)
Length = 397
Score = 105 bits (252), Expect = 1e-21
Identities = 41/81 (50%), Positives = 63/81 (77%)
Frame = +2
Query: 359 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEK 538
+K+ F+D+LP ++ T+ S+L+EVP++ +WLKK+L YNL GGK RG+TT+ +Y+ +EK
Sbjct: 58 KKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEMLEK 117
Query: 539 PEKVTEHTLKMACKLGWCVEM 601
PE +TE T+ +A LGWCVE+
Sbjct: 118 PENITEETIYLAKTLGWCVEI 138
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 602 TLWRTSMGQHLDHVTGNR-KTDYSSFTLDR 688
+L TS+GQHLD R K+DYS FT++R
Sbjct: 207 SLMHTSIGQHLDVTMERRQKSDYSLFTIER 236
>UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 3 -
Bombyx mori (Silk moth)
Length = 385
Score = 91.9 bits (218), Expect = 1e-17
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +2
Query: 347 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYK 526
+I E++ F D +I L K +++P++G W+KK+L YN+ GGK RGITTV++Y+
Sbjct: 42 QIAKERETFQDAWKGIIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYE 101
Query: 527 TIEKPEKVTEHTLKMACKLGWCVEM 601
EKPE VTE +++A GWC EM
Sbjct: 102 LFEKPENVTEEMVRLARVAGWCTEM 126
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 614 TSMGQHLDHVTGNR-KTDYSSFTLDR 688
TSMGQHLD+ +R K DYS FT +R
Sbjct: 199 TSMGQHLDYAMAHRNKQDYSLFTTER 224
>UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16;
Neoptera|Rep: Farnesyl diphosphate synthase - Anthonomus
grandis (Boll weevil)
Length = 438
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/89 (31%), Positives = 49/89 (55%)
Frame = +2
Query: 335 SKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTV 514
S L + + F L P+++ L + E+P + + ++L YN+ GK RG+ +
Sbjct: 90 SSTLVSKEQSRDFMALFPDLVRELTELGRNPELPDVMRRVARVLQYNVPNGKKNRGLILI 149
Query: 515 ISYKTIEKPEKVTEHTLKMACKLGWCVEM 601
+YK +E P+ +T +K+A LGWC+EM
Sbjct: 150 SAYKMLEDPKNLTPENIKLASVLGWCLEM 178
>UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM06581p
- Drosophila melanogaster (Fruit fly)
Length = 419
Score = 62.9 bits (146), Expect = 8e-09
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +2
Query: 356 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 535
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 536 KPEKVTEHTLKMACKLGWCVEM 601
+ +T +K+A LGWCVEM
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEM 163
>UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=61;
Spermatophyta|Rep: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Arabidopsis
thaliana (Mouse-ear cress)
Length = 384
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/123 (30%), Positives = 63/123 (51%)
Frame = +2
Query: 293 LIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHY 472
L R + S++M T K+ + + DLL + N+S+L W+ +ML Y
Sbjct: 32 LYRRRIQSSSMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRL--------WVDRMLDY 83
Query: 473 NLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMTLWRTSMGQHLDHVTGN 652
N+ GGK RG++ V S+K +++ +TE + ++C LGWC+E W + LD + N
Sbjct: 84 NVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIE---WLQAYFLVLDDIMDN 140
Query: 653 RKT 661
T
Sbjct: 141 SVT 143
>UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6;
Magnoliophyta|Rep: OSJNBa0071I13.18 protein - Oryza
sativa subsp. japonica (Rice)
Length = 407
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 449 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMTLWRTSMGQ 628
W+ KM+ YN+ GGK RG++ V SY + + +V + +AC LGWCVE W +
Sbjct: 99 WVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVE---WLQASAL 155
Query: 629 HLDHVTGNRKT 661
LD +T N T
Sbjct: 156 VLDDITDNAYT 166
>UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=44;
Eukaryota|Rep: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Homo sapiens
(Human)
Length = 353
Score = 59.7 bits (138), Expect = 7e-08
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Frame = +2
Query: 434 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEM 601
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 36 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVEL 94
>UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza
sativa|Rep: OSIGBa0158D24.4 protein - Oryza sativa
(Rice)
Length = 392
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 449 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMTLWRTSMGQ 628
WL +M+ YN+ GGK RG++ + SY +++ +VTE +AC LGWCVE W +
Sbjct: 84 WLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVE---WFQACAL 140
Query: 629 HLDHVTGNRKT 661
LD + + T
Sbjct: 141 LLDDIMDDSHT 151
>UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=16;
Fungi/Metazoa group|Rep: Farnesyl pyrophosphate
synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate
synthetase) [Includes: Dimethylallyltranstransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] -
Gallus gallus (Chicken)
Length = 367
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +2
Query: 359 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---LKKMLHYNLVGGKHTRGITTVISYKT 529
E++ F P+++ L + + P++GD LK++L YN GGK RG+T V +Y+
Sbjct: 27 EREEFVGFFPQIVRDL-TEDGIGH-PEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRE 84
Query: 530 IEKPEKVTEHTLKMACKLGWCVEM 601
+ P + +L+ A +GWC+E+
Sbjct: 85 LSGPGQKDAESLRCALAVGWCIEL 108
>UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase,
chloroplast precursor; n=2; Anthemideae|Rep:
Chrysanthemyl diphosphate synthase, chloroplast
precursor - Tanacetum cinerariifolium (Dalmatian daisy)
(Chrysanthemumcinerariifolium)
Length = 395
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +2
Query: 449 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVE 598
W+++M+ YN+ GGK RG + V SY+ + K E++TE +AC LGWC E
Sbjct: 88 WVERMIDYNVPGGKMVRGYSVVDSYQLL-KGEELTEDEAFLACALGWCTE 136
>UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips
pini|Rep: Geranyl diphosphate synthase - Ips pini (Pine
engraver beetle)
Length = 416
Score = 53.2 bits (122), Expect = 6e-06
Identities = 30/108 (27%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Frame = +2
Query: 296 IRYKNNSANMTTA-SKNLEIINEK-----KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLK 457
IR+K+ S+ + ++ SK++ NE+ K D++ PEV+ ++ + E+ I L+
Sbjct: 41 IRHKSRSSAVPSSLSKSMYDHNEEMKAAMKYMDEIYPEVMGQIEKVPQYEEIKPILVRLR 100
Query: 458 KMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEM 601
+ + Y + GK +G+ V +K + P+ +T +K++ LGWC E+
Sbjct: 101 EAIDYTVPYGKRFKGVHIVSHFKLLADPKFITPENVKLSGVLGWCAEI 148
>UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial; n=7; Apis
mellifera|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial - Apis
mellifera
Length = 545
Score = 50.4 bits (115), Expect = 4e-05
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +2
Query: 299 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL 478
R K+N S N +E+ + P ++ L K E+ + W+ ++L YN+
Sbjct: 210 RLKSNKVRRLVDSFN----DERNKLMTVWPNIVNEL-TKDNNEELLDVNKWITEVLEYNV 264
Query: 479 VGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVE-MTLWRTSMGQHLDHVTGNR 655
G R ++ VI+ K + ++TE ++A L WC+E M T LDH R
Sbjct: 265 PKGGKRRSVSFVIACKLLTSQNQLTEENTRLAHILAWCIEIMQAVHTMADDILDHANMRR 324
>UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3;
Dictyostelium discoideum|Rep: Farnesyl diphosphate
synthase - Dictyostelium discoideum AX4
Length = 382
Score = 49.6 bits (113), Expect = 8e-05
Identities = 29/101 (28%), Positives = 54/101 (53%)
Frame = +2
Query: 296 IRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYN 475
+ SA + TA + E+ + ++F L E++ L + PQ W++KM++ N
Sbjct: 22 LNMNQTSAPIKTAKE--ELADFVEIFPILTNEILKELPG---MDMPPQTIAWVEKMINVN 76
Query: 476 LVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVE 598
+ GGK RG+T + S + + + +++ + +A LGWCVE
Sbjct: 77 VSGGKMNRGLTVLHSLQLLVEGRQLSRSEIFLANVLGWCVE 117
>UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 348
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 446 DWLKKMLHYNLVGGKHTRGITTVISYKTIE--KPEKVTEHTLKMACKLGWCVE 598
+W+K+M+ YN+ GK RG+ V + ++ K E V E LK A +GWC+E
Sbjct: 37 EWIKRMIDYNVPHGKLNRGLAVVDGVRALKAAKNETVDEEELKRAMVVGWCIE 89
>UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putative;
n=7; Plasmodium|Rep: Farnesyl pyrophosphate synthase,
putative - Plasmodium vivax
Length = 375
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 362 KKMFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEK 538
+ M+D + L S E+ + I + K + YN +GGK+ RGI ++ Y+ ++
Sbjct: 17 RNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKN 76
Query: 539 PEKVTEHTLKMACKLGWCVEM 601
+ + K AC L WC+E+
Sbjct: 77 RDINSSEWEKAAC-LAWCIEI 96
>UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 8
SCAF15044, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 402
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/48 (33%), Positives = 32/48 (66%)
Frame = +2
Query: 458 KMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEM 601
++L YN+ GGK RG++ + S + + P ++T+ ++ A +GWC+E+
Sbjct: 68 QVLMYNVPGGKRNRGLSVIGSLRELLPPSELTQDLVQRALLVGWCIEL 115
>UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02430 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/93 (23%), Positives = 43/93 (46%)
Frame = +2
Query: 323 MTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRG 502
M TA +++ K++F+ + ++L ++ + + ++ YNL GK RG
Sbjct: 1 MPTADLHIKFREVKEIFESYF-DTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRG 59
Query: 503 ITTVISYKTIEKPEKVTEHTLKMACKLGWCVEM 601
+ V+SY + +L +GWCVE+
Sbjct: 60 VLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVEL 92
>UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 388
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 419 KLSEVPQIG-DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTE---HTLKMACKLG 586
KL +P+ W YN+ GGK RG++ V +Y I K +KV E LK LG
Sbjct: 65 KLYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVVDTY-AILKGKKVNELESDELKKVTILG 123
Query: 587 WCVEM 601
WCVEM
Sbjct: 124 WCVEM 128
>UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=32; Fungi|Rep:
Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Saccharomyces
cerevisiae (Baker's yeast)
Length = 352
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 362 KKMFDDLLPEVIMTLQNKSKLSEVPQIG-DWLKKMLHYNLVGGKHTRGITTVISYKTIEK 538
++ F ++ P+++ L +P+ DW L+YN GGK RG++ V +Y +
Sbjct: 9 RERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSN 68
Query: 539 P--EKVTEHTLKMACKLGWCVEM 601
E++ + + LGWC+E+
Sbjct: 69 KTVEQLGQEEYEKVAILGWCIEL 91
>UniRef50_A5PJD2 Cluster: MGC152321 protein; n=6; Eutheria|Rep:
MGC152321 protein - Bos taurus (Bovine)
Length = 350
Score = 38.3 bits (85), Expect = 0.19
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 284 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN-KSKLSEVPQIGDWLKK 460
W ++ K N++ ++S +L+ N K DLL + ++ +QN + +L E I D L++
Sbjct: 248 WEEMKPQKMNASGNLSSSSSLDRPNSKPSGADLLEKNLIEIQNLRQRLEESVFINDRLRE 307
Query: 461 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTE 556
L Y L +G S ++ P TE
Sbjct: 308 RLEYVLSDAGQGKGAAQSASDVSLTTPHSYTE 339
>UniRef50_UPI0000DB7AE1 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 423
Score = 37.5 bits (83), Expect = 0.33
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Frame = +2
Query: 221 DIVDMSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIM 400
+I++ SV + KV ++ ++ + A++ ++ + + + E K+ +++ I
Sbjct: 133 EIIEESVETLHETLIKVESPLGMKIKTFEFDDASILSSPEKTKQLEENKLLEEIPKATIS 192
Query: 401 TLQNKSKLSEVPQIGDWLKKMLHY-------NLVGGKHTRGITTVISYKTIEKPEKVTEH 559
+L+ K KLSE I KML N+ T I +I+ +TIEK +
Sbjct: 193 SLEMKIKLSENDDISTVHSKMLEENKLDMTPNITKSIETSDIDQIINDQTIEKSVETIYE 252
Query: 560 TL-KMACKLGWCVEMT 604
TL K+ LG +E++
Sbjct: 253 TLPKVTSPLGMKIELS 268
>UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5;
Dikarya|Rep: Farnesyl diphosphate synthase - Lactarius
chrysorrheus (Yellowdrop milkcap) (Agaricus theiogalus)
Length = 381
Score = 37.5 bits (83), Expect = 0.33
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +2
Query: 308 NNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIG-DWLKKMLHYNLVG 484
++SA + A+ + +K F+ + V L + +P+ ++ ++ + YN+ G
Sbjct: 10 SSSAPLPPAAAKDKKAAARKRFEGVYAVVRDDLLEDFRKHNMPEEAIEYYQRSMDYNVPG 69
Query: 485 GKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVE 598
GK RG++ V S I K ++TE A LGW VE
Sbjct: 70 GKLNRGMSVVDSV-AILKGRELTESEYFQAAVLGWAVE 106
>UniRef50_Q5JWR5 Cluster: Protein dopey-1; n=25; Deuterostomia|Rep:
Protein dopey-1 - Homo sapiens (Human)
Length = 2465
Score = 37.5 bits (83), Expect = 0.33
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 469
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 470 YNLVGGKHTRGITTV-ISYKTI 532
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>UniRef50_A3GFK9 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 425
Score = 36.7 bits (81), Expect = 0.59
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = -2
Query: 381 RSSNIFFSLIISRFFEAVVIFALLFLYLISCGQY--LYVTLRVNLRQLNTLMST 226
RSS +F S ++S F A++ F +++ G+Y L +TL + R L+TL+S+
Sbjct: 85 RSSTLFISTLVSGFISAIITFPQFQNHILGYGRYYSLDLTLLLTTRALDTLVSS 138
>UniRef50_A5DBM0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 428
Score = 35.9 bits (79), Expect = 1.0
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +2
Query: 248 CLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLS 427
CLK +K+T K WP +N S ++ TA N+E+ D +V N + L
Sbjct: 309 CLKVGQKITEKVWPGTQIIENQSKSLITAMINIEV-----PIDTFAKDVGSKGLNVTDLK 363
Query: 428 EVPQIGDWLKKMLHYN 475
EV + D ++ + YN
Sbjct: 364 EVKKCVDTIQYQMAYN 379
>UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;
Aspergillus niger|Rep: Contig An16c0060, complete genome
- Aspergillus niger
Length = 349
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 359 EKKMFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 535
++ FD +L E++ + + PQ + ++++K + N GK RG++ + +I
Sbjct: 6 DRSKFDGVLAELVADVLEHFASNGAPQEVKNYVEKCFYENSTNGKMLRGLSVPQTGLSI- 64
Query: 536 KPEKVTEHTLKMACKLGWCVEM 601
VTE C LGW VE+
Sbjct: 65 LGRPVTEQEYHDLCVLGWLVEL 86
>UniRef50_Q4SSX9 Cluster: Chromosome 8 SCAF14344, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 8
SCAF14344, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2446
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 469
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAVDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 470 YNLVGGKHTRGITTV-ISYKTI 532
L G H + + T I +K I
Sbjct: 73 PALPSGVHRKALETYEIIFKII 94
>UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase ,
putative; n=1; Babesia bovis|Rep: Farnesyl pyrophosphate
synthetase , putative - Babesia bovis
Length = 336
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 464 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKL--GWCVEM 601
+ YNL GGK RG V + + I + ++E+ K+A L GWCVE+
Sbjct: 52 IQYNLQGGKLIRGTLVVATTRCI-LGDNISEYQWKLALILGMGWCVEL 98
>UniRef50_Q9ZCE0 Cluster: Tyrosine recombinase xerC; n=10;
Rickettsia|Rep: Tyrosine recombinase xerC - Rickettsia
prowazekii
Length = 305
Score = 34.7 bits (76), Expect = 2.4
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 278 KYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLK 457
K W + + + N +N T + N ++ + + + E++ TL N K +++ I WL
Sbjct: 11 KQWQKYLILQKNYSNNTVIAYNNDLKHFLEFMNYYNSELV-TL-NHIKTADIRLIRSWLA 68
Query: 458 KMLHYNLVGGKHTRGITTVIS-YKTIEKPEKVTEHTL 565
K N RG++TV + YK +EK + H +
Sbjct: 69 KRKCENFTASSIARGLSTVKNFYKFLEKTLLLNNHII 105
>UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putative;
n=11; Trypanosomatidae|Rep: Farnesyl pyrophosphate
synthase, putative - Leishmania major
Length = 362
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 449 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKV----TEHTLKMACKLGWCVEM 601
+LK M+ +GGK+ RG+ V + + K ++ E L AC GW +EM
Sbjct: 35 YLKSMMDTTCLGGKYNRGLCVVDVAEAMAKDTQMDAAAMERVLHDACVCGWMIEM 89
>UniRef50_A6UNE4 Cluster: ATPase; n=1; Methanococcus vannielii
SB|Rep: ATPase - Methanococcus vannielii SB
Length = 423
Score = 34.3 bits (75), Expect = 3.1
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Frame = +2
Query: 194 WFYQRIGLHDIVDMSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINE---- 361
+ ++ +H D SV N LK + Y ++ + + N+S TA N++ + +
Sbjct: 58 FIFKEFNVH-FEDNSVLNVLKNDDSIEYNFYSKTKKL-NHSFKFLTAKTNIDDLKKLIGY 115
Query: 362 -KKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISY-KTIE 535
+ D L +V+ + K E P+ WLK++L+ + HT + + Y KT
Sbjct: 116 FENSKDTNLADVLKNINLSEKKEEFPE---WLKELLNSCKIYFIHTNRLNKISEYEKTKS 172
Query: 536 KPEKVTEHTLKMACKL 583
V E++ + K+
Sbjct: 173 LDLTVLEYSKDLVKKI 188
>UniRef50_UPI0001509DE7 Cluster: hypothetical protein TTHERM_00285490;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00285490 - Tetrahymena thermophila SB210
Length = 1629
Score = 33.9 bits (74), Expect = 4.1
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 305 KNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVG 484
+ N A T+ + + N K + D +LP+V + KSK+ + Q+ D+ + N
Sbjct: 883 EENKATTTSTTSYAKTQNIKSINDIILPKVKAPPKLKSKIKKTSQVSDFQMDDFNVNNSQ 942
Query: 485 GKHTRGI-TTVISYKTIE--KPEKVTEHTL 565
+ + I + V+ Y+ IE K ++ TEH +
Sbjct: 943 KRKNQQIQSEVLKYEYIEIVKQKRETEHLM 972
>UniRef50_UPI0000499D14 Cluster: hypothetical protein 73.t00020;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 73.t00020 - Entamoeba histolytica HM-1:IMSS
Length = 987
Score = 33.5 bits (73), Expect = 5.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 396 ITSGRRSSNIFFSLIISRFFEAVVIFALLFLYLISCGQYLYVTLRVNLRQLNTLMS 229
+ +G + N FS I F + I L +LY I CG+ Y++++ R N +S
Sbjct: 600 VFNGMKFKNDLFSAFIYSFEHDISIGILFYLYTICCGESNYMSIKEIKRAFNLSLS 655
>UniRef50_O14207 Cluster: Uncharacterized protein C6B12.02c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C6B12.02c - Schizosaccharomyces pombe (Fission yeast)
Length = 1888
Score = 33.5 bits (73), Expect = 5.5
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 308 NNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGG 487
N S+N T + NL+ + KK +LP +TLQ K KL G K LH +++ G
Sbjct: 254 NISSNSTVSDLNLKTL--KKRLRGVLPPSFLTLQEKKKLE---NRGVKKKTSLHKSVIEG 308
Query: 488 KHTRGI 505
+ +G+
Sbjct: 309 EKIKGV 314
>UniRef50_A4YCB5 Cluster: Glycosyl transferase, family 2; n=7;
Gammaproteobacteria|Rep: Glycosyl transferase, family 2
- Shewanella putrefaciens CN-32
Length = 255
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/92 (21%), Positives = 40/92 (43%)
Frame = +2
Query: 230 DMSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQ 409
D ++ C K+T K+T WP + K + + T+ L I+ + DD + ++ L
Sbjct: 42 DNTLVICQKYTDKITVTDWPGFGKQKQRALDQTSCDWVLS-IDADEALDDTMRNALVALL 100
Query: 410 NKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGI 505
++ ++ E W + L G+ R +
Sbjct: 101 SQEQIKESAFCLPWGVTLYGKTLKYGRSARAV 132
>UniRef50_Q31Q84 Cluster: Phage late control gene D protein GPD;
n=2; Synechococcus elongatus|Rep: Phage late control
gene D protein GPD - Synechococcus sp. (strain PCC 7942)
(Anacystis nidulans R2)
Length = 480
Score = 32.7 bits (71), Expect = 9.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 341 NLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGK 490
+L +++E + D V + L ++ KL E+P+ G WLK L Y GGK
Sbjct: 25 SLTVVDEAEQLSD---RVEIVLDDRDKLLEIPKSGTWLKVYLGY-AEGGK 70
>UniRef50_A6GZT1 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative
uncharacterized protein - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 1089
Score = 32.7 bits (71), Expect = 9.5
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 254 KFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEV 433
K++ + Y++W + ++N N N + KK+FD+L P + K K E
Sbjct: 222 KYSNNIVYRFW---VSNQDNDYNERLQYNNFMLDFSKKLFDNLKPHSEEEIIGKIKELEK 278
Query: 434 PQIGDWLKKMLHYN 475
I D L + +YN
Sbjct: 279 TVIIDGLDHVENYN 292
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,464,828
Number of Sequences: 1657284
Number of extensions: 14479635
Number of successful extensions: 34783
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 33541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34768
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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