Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_K20
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF025459-7|AAB70981.1|  132|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF016655-3|AAU05587.1|  322|Caenorhabditis elegans Serpentine re...    29   3.4  
AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical ...    29   4.5  
AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine r...    29   4.5  
AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical...    29   4.5  

>Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical
           protein F40F9.8 protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 356 NEKKMFDDLLPEVIMTLQNKSKLSEVPQ 439
           N +  FDDLLP V++ +QN+    + P+
Sbjct: 42  NGRVSFDDLLPRVVLAIQNEEWKDDTPK 69


>AF025459-7|AAB70981.1|  132|Caenorhabditis elegans Hypothetical
           protein H14A12.5 protein.
          Length = 132

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +2

Query: 224 IVDMSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTAS-KNLEIINEKKMFDDLLPE 391
           +VD+  FN  +F+ K+T +YW ++ R +N+S +    +   L+  N   + D+ LP+
Sbjct: 12  MVDLQTFNT-QFS-KITDRYWREIFRRQNDSHHPDHINVSRLQTANIITVLDENLPQ 66


>AF016655-3|AAU05587.1|  322|Caenorhabditis elegans Serpentine
           receptor, class z protein67 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = -2

Query: 417 DLFCSVIITSGRRSSNIFFSLIISRFFEAVVIFALLFLYLISCGQYLYVTLRVNLRQLNT 238
           D+ C V+        +  + LI S FF  + IF  + + L+     LY+ + +++R+L+ 
Sbjct: 157 DIICIVLHAVTFFDDSHPYYLIWSVFF--ITIFYTMHI-LLFLSALLYIPILISIRKLSH 213

Query: 237 LMSTMS*SPMR---W*NHIRFYFQQFS 166
           L S+   +P R   W   I F F+  S
Sbjct: 214 LASSQLNNPQRYIFWQTMILFVFKSMS 240


>AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical
           protein Y51H4A.5 protein.
          Length = 498

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 423 NLDLFCSVIITSGRRSSNIFFSLIISRFFEAVVIFALLF 307
           NL+LF +   T   RS+ IFF+   +  F  +++F L+F
Sbjct: 141 NLELFFACFNTCIFRSNRIFFNSAANLNFATILVFFLIF 179


>AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine
           receptor, class z protein19 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -2

Query: 333 AVVIFALLFLYLISCGQYLYVTLRVNLRQLNTLMSTMS*SPMRW 202
           AVVI  +L   LI    +LY+ + +++R+L  L S    +P R+
Sbjct: 196 AVVINQILLHILIFVSGFLYIPIIISVRKLAHLASAQQNNPQRY 239


>AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical
           protein Y18H1A.9 protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/67 (20%), Positives = 30/67 (44%)
 Frame = +2

Query: 353 INEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTI 532
           I    M DD+   ++   + + KL +  ++ DW ++ + +NL        +   ++   I
Sbjct: 81  IKHSVMIDDVQKVIVEQKEKRDKLRKQVRLHDWREQKVQFNLAQYHSFADVINYLNSLAI 140

Query: 533 EKPEKVT 553
             PE V+
Sbjct: 141 TYPELVS 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,740,053
Number of Sequences: 27780
Number of extensions: 363940
Number of successful extensions: 942
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)