Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_K19
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 404 TFLNRCYKCAFQICIIIDNFRN 339
           TF++RCYK   Q  +   NFRN
Sbjct: 699 TFVDRCYKMQEQFTL---NFRN 717


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 130 YVLNMLHLFQKKISL 174
           YVLNM H F  K S+
Sbjct: 341 YVLNMEHFFSVKCSI 355


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 496 LKTDGLAWELFQMDLMVLRVMLYIHSLLLLPMESGKL 606
           LKTD     +    L++  V+LY  SL   P+  G+L
Sbjct: 36  LKTDKNCTIVIIFHLILFAVLLYFASLEKNPLFDGQL 72


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 468 DHMRDWFLGTEDRWVSMG 521
           DH RDW+   E+++   G
Sbjct: 95  DHKRDWWNELEEKYDKEG 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,083
Number of Sequences: 336
Number of extensions: 3819
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)