Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K19
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical ... 240 6e-64
AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical ... 174 4e-44
AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical ... 171 5e-43
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 31 0.78
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 31 0.78
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 31 0.78
U70850-1|AAB09124.2| 104|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 29 3.2
AC006648-8|AAF39857.1| 302|Caenorhabditis elegans Btb and math ... 29 3.2
Z49907-6|CAA90089.1| 274|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF106573-10|AAC78155.2| 862|Caenorhabditis elegans Gex interact... 28 7.3
U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone... 27 9.6
AC006709-1|AAF60432.2| 256|Caenorhabditis elegans Hypothetical ... 27 9.6
>AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical
protein F46E10.10a protein.
Length = 336
Score = 240 bits (588), Expect = 6e-64
Identities = 117/228 (51%), Positives = 153/228 (67%), Gaps = 2/228 (0%)
Frame = +3
Query: 15 LLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPS-IPKENFTAMTRLD 191
LLAANV+IFK QG+AL + A+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD
Sbjct: 101 LLAANVKIFKSQGKALAEYAKPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLD 160
Query: 192 QNRAQSQLAAKIGVPVKDVKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYL 371
NRA +QLA K G + +VK VIIWGNHS TQFPD ++A G + + D+A+L
Sbjct: 161 HNRALAQLALKTGTTIGNVKNVIIWGNHSGTQFPDVTHATVNKNGTETDAYAAVGDNAFL 220
Query: 372 KGAFVTTVQKRGAAVIXXXXXXXXXXXXXXXXDHMRDWFLGTE-DRWVSMGVVSDGSYGT 548
+G F+ TVQKRG +I DH+ DW GT+ ++VSM V SDGSYG
Sbjct: 221 QGPFIATVQKRGGVIIEKRKLSSAMSAAKAACDHIHDWHFGTKAGQFVSMAVPSDGSYGI 280
Query: 549 PRDVVYSFPVTVTNGKWKIVEGLTISDFARQMLDATGKELVEXKQEAL 692
P+ +++SFPVT+ G+WKIV+GL+ DFA+ + AT KEL E + +AL
Sbjct: 281 PQGLIFSFPVTIEGGEWKIVQGLSFDDFAKGKIAATTKELEEERDDAL 328
>AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical
protein F46E10.10c protein.
Length = 181
Score = 174 bits (424), Expect = 4e-44
Identities = 82/173 (47%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Frame = +3
Query: 177 MTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIIN 356
MTRLD NRA +QLA K G + +VK VIIWGNHS TQFPD ++A G + +
Sbjct: 1 MTRLDHNRALAQLALKTGTTIGNVKNVIIWGNHSGTQFPDVTHATVNKNGTETDAYAAVG 60
Query: 357 DDAYLKGAFVTTVQKRGAAVIXXXXXXXXXXXXXXXXDHMRDWFLGTE-DRWVSMGVVSD 533
D+A+L+G F+ TVQKRG +I DH+ DW GT+ ++VSM V SD
Sbjct: 61 DNAFLQGPFIATVQKRGGVIIEKRKLSSAMSAAKAACDHIHDWHFGTKAGQFVSMAVPSD 120
Query: 534 GSYGTPRDVVYSFPVTVTNGKWKIVEGLTISDFARQMLDATGKELVEXKQEAL 692
GSYG P+ +++SFPVT+ G+WKIV+GL+ DFA+ + AT KEL E + +AL
Sbjct: 121 GSYGIPQGLIFSFPVTIEGGEWKIVQGLSFDDFAKGKIAATTKELEEERDDAL 173
>AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical
protein F46E10.10b protein.
Length = 273
Score = 171 bits (415), Expect = 5e-43
Identities = 83/163 (50%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Frame = +3
Query: 15 LLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPS-IPKENFTAMTRLD 191
LLAANV+IFK QG+AL + A+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD
Sbjct: 101 LLAANVKIFKSQGKALAEYAKPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLD 160
Query: 192 QNRAQSQLAAKIGVPVKDVKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYL 371
NRA +QLA K G + +VK VIIWGNHS TQFPD ++A G + + D+A+L
Sbjct: 161 HNRALAQLALKTGTTIGNVKNVIIWGNHSGTQFPDVTHATVNKNGTETDAYAAVGDNAFL 220
Query: 372 KGAFVTTVQKRGAAVIXXXXXXXXXXXXXXXXDHMRDWFLGTE 500
+G F+ TVQKRG +I DH+ DW GT+
Sbjct: 221 QGPFIATVQKRGGVIIEKRKLSSAMSAAKAACDHIHDWHFGTK 263
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical
protein F13D12.2 protein.
Length = 333
Score = 31.1 bits (67), Expect = 0.78
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 15 LLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN-FTAMTRLD 191
L+ NV IFK L K + D +LVV NP + + K + +P+E F + T LD
Sbjct: 109 LVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRERVFGSGTNLD 166
Query: 192 QNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 284
R + L+ K+ + II G H +
Sbjct: 167 SARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 31.1 bits (67), Expect = 0.78
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 15 LLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN-FTAMTRLD 191
L+ NV IFK L K + D +LVV NP + + K + +P+E F + T LD
Sbjct: 109 LVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRERVFGSGTNLD 166
Query: 192 QNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 284
R + L+ K+ + II G H +
Sbjct: 167 SARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 31.1 bits (67), Expect = 0.78
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 15 LLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN-FTAMTRLD 191
L+ NV IFK L K + D +LVV NP + + K + +P+E F + T LD
Sbjct: 109 LVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRERVFGSGTNLD 166
Query: 192 QNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 284
R + L+ K+ + II G H +
Sbjct: 167 SARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>U70850-1|AAB09124.2| 104|Caenorhabditis elegans Hypothetical
protein F28F9.3 protein.
Length = 104
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +1
Query: 487 SLALKTDGLAWELFQMDLMVLRVMLYIHSLLLLPMESGKLLRVSLSLILPVKCSMLLA 660
S+ K G+ W+ +++ + + +L +HSLL+LP+ G L ++S++L + + S LA
Sbjct: 11 SITRKYFGIRWD-YRISSINMASLLDLHSLLVLPL--GDLPKISIALPISLALSNSLA 65
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +3
Query: 45 EQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 224
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +3
Query: 45 EQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 224
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>AC006648-8|AAF39857.1| 302|Caenorhabditis elegans Btb and math
domain containingprotein 1 protein.
Length = 302
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 404 WCCRYCRQENVICSFCC*SCIRPHERLVPW 493
W +CR+E + F C+RP + +VPW
Sbjct: 36 WQLSFCRKEEFVGVFL--RCLRPTDGIVPW 63
>Z49907-6|CAA90089.1| 274|Caenorhabditis elegans Hypothetical
protein B0491.7 protein.
Length = 274
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 6 GRYLLAANVRIFKEQGQA-LDKAARKDVKVLVVGNP--ANTNA-LICSKYAPSIP 158
GR ++ A+ + +++ A L+ A ++DV +LVVG+P A T+A L+ +IP
Sbjct: 53 GREIIEADRTVVEQESDAILNGADKEDVALLVVGDPFGATTHADLVLRAKQQNIP 107
>AF106573-10|AAC78155.2| 862|Caenorhabditis elegans Gex interacting
protein protein 12 protein.
Length = 862
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 434 HFPGGNNGSTTFLNRCYKCAFQICIIIDNFRNRFLSASNNSYSI 303
H P ++G + LNR + C I ++F + F+ A+N + +
Sbjct: 398 HLPSSSHGECSNLNRTLPASDLNCSIGEDFDSSFVDANNQTLPV 441
>U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 45 protein.
Length = 525
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 296 CFECCSYCWRRSKICF*NYQ**CIFERRICNNGSKTWCCRYCRQENVI 439
C C+ +RR+ Y+ C F+R+ + +K + CR CR E +
Sbjct: 19 CCRACAAFFRRTLTMNLRYK--CRFDRKCEVSFNKRYSCRCCRYEKCV 64
>AC006709-1|AAF60432.2| 256|Caenorhabditis elegans Hypothetical
protein Y119C1A.1 protein.
Length = 256
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 389 NGSKTWCCRYCRQENVICSFCC*SCIRPHERLVP 490
N + W C C +EN S+ C C P R P
Sbjct: 205 NSTGPWICDRCSRENNSNSYRCHHCQLPSRRFDP 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,482,140
Number of Sequences: 27780
Number of extensions: 371896
Number of successful extensions: 1070
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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