Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_K18
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346...    33   0.36 
02_02_0364 - 9457747-9458043,9459815-9459952,9460072-9460141,946...    29   5.9  

>07_03_1523 +
           27432991-27433199,27433585-27434185,27434468-27434642,
           27434686-27436418,27436871-27437317
          Length = 1054

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 373 KAPKLFGWWFRRPTSWWSEIPCVFFAMFIIVRIY 272
           + P+   WW RR  S WS +  +    F ++R Y
Sbjct: 330 RKPRTCNWWPRRAISLWSPVVAILLLAFAVLRYY 363


>02_02_0364 -
           9457747-9458043,9459815-9459952,9460072-9460141,
           9460928-9460995,9462451-9462582
          Length = 234

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 819 CIX*ICIHILFSELFSKIIIRWMSIFVYLPRMF 721
           C   +CI I+F+ELFS  +  +  I   LP  F
Sbjct: 37  CTGNLCIKIVFTELFSDTMRSFSQIIYVLPSFF 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,243,813
Number of Sequences: 37544
Number of extensions: 287716
Number of successful extensions: 598
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)