Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K14
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024756-6|AAK29881.1| 105|Caenorhabditis elegans Glutaredoxin ... 95 3e-20
U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AC006831-2|AAF39994.2| 119|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC006831-3|ABD63200.1| 96|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical pr... 41 0.001
U58751-6|AAZ82854.1| 131|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 32 0.42
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 32 0.42
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 31 0.56
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 31 0.56
Z98866-2|CAB11547.1| 142|Caenorhabditis elegans Hypothetical pr... 31 0.98
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 28 5.2
Z75554-9|CAA99952.2| 278|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 28 6.9
Z75549-2|CAA99916.1| 313|Caenorhabditis elegans Hypothetical pr... 27 9.1
>AC024756-6|AAK29881.1| 105|Caenorhabditis elegans Glutaredoxin
protein 10 protein.
Length = 105
Score = 95.5 bits (227), Expect = 3e-20
Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Frame = +3
Query: 27 FLKAALSKAKVVVFSKSYCPYCKLAKAVFEQVK---QPIKVIELNERDDGNTIQDNLAQL 197
F+ L +KVVVFSKSYCPYC A+A E V ++ IE++ER D N IQD L L
Sbjct: 5 FVDGLLQSSKVVVFSKSYCPYCHKARAALESVNVKPDALQWIEIDERKDCNEIQDYLGSL 64
Query: 198 TGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 302
TG R+VP+VFING GGG D A ++GKL +L
Sbjct: 65 TGARSVPRVFINGKFFGGGDDTAAGAKNGKLAALL 99
>U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical
protein F10D7.3 protein.
Length = 146
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +3
Query: 54 KVVVFSKSYCPYCKLAKAVFEQVK-QPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFI 230
KV+V+SK+YCP+ K KA+ + +K++EL+ + +Q+ L + +G TVPQ+FI
Sbjct: 45 KVMVYSKTYCPWSKRLKAILANYEIDDMKIVELDRSNQTEEMQEILKKYSGRTTVPQLFI 104
Query: 231 NGNCVGGGSDVKALYESGKLEPML 302
+G VGG + KA+ E G+L P+L
Sbjct: 105 SGKFVGGHDETKAIEEKGELRPLL 128
>AC006831-2|AAF39994.2| 119|Caenorhabditis elegans Hypothetical
protein ZK121.1a protein.
Length = 119
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = +3
Query: 42 LSKAKVVVFSKSYCPYCKLAKAVFEQVKQPIKVIELN-----ERDDGNTIQDNLAQLTGF 206
+ K VV+++K+ C +C AK +F V+ K + L+ + DD I + L T
Sbjct: 17 VKKDPVVMYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQ 76
Query: 207 RTVPQVFINGNCVGGGSDVKALYESGKL 290
+VPQ+F+ G +GG +++ AL SG L
Sbjct: 77 TSVPQIFVCGRFIGGYTELDALRNSGHL 104
>AC006831-3|ABD63200.1| 96|Caenorhabditis elegans Hypothetical
protein ZK121.1b protein.
Length = 96
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +3
Query: 63 VFSKSYCPYCKLAKAVFEQVKQPIKVIELN-----ERDDGNTIQDNLAQLTGFRTVPQVF 227
+++K+ C +C AK +F V+ K + L+ + DD I + L T +VPQ+F
Sbjct: 1 MYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTSVPQIF 60
Query: 228 INGNCVGGGSDVKALYESGKL 290
+ G +GG +++ AL SG L
Sbjct: 61 VCGRFIGGYTELDALRNSGHL 81
>Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical
protein ZC334.7 protein.
Length = 210
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +3
Query: 57 VVVFSKSYCPYCKLAKAVFEQVKQ--PIKVIEL-NERDDGNTIQDNLAQLTGFRTVPQVF 227
V++++ C C+ AK + P +EL + D +Q +L ++T T P VF
Sbjct: 118 VMMYTLIQCVPCQRAKHLLATTYGDIPSHFLELVGDEDWQRQLQVDLLKVTRQATFPYVF 177
Query: 228 INGNCVGGGSDVKALYESGKLEPML 302
+ GN +GG SD+ ++ SG+L L
Sbjct: 178 VCGNFIGGSSDLFNMHHSGQLRQAL 202
>U58751-6|AAZ82854.1| 131|Caenorhabditis elegans Hypothetical
protein C07G1.8 protein.
Length = 131
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +3
Query: 57 VVVFSKSYCPYCKLAKAVFEQVKQPIKVIELNERDDGNTIQD------NLAQLTGFRTVP 218
VV+++K C YC KA E + I E N I + L LT RTVP
Sbjct: 29 VVLYTKDGCGYC--VKAKNELYEDGIHYTEKNLNTVSKVIPNPQEYIQGLMDLTRQRTVP 86
Query: 219 QVFINGNCVGGGSDVKAL 272
Q+FI G VGG +++ AL
Sbjct: 87 QIFICGKFVGGYTELNAL 104
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 30 LKAALSKAKVVVFSKS--YCPYCKLAKAVFEQVKQ-PIKVIELNERDDGNTIQDNLAQLT 200
L A ++ KV+VF K P C ++ + E + IK + D ++ L + +
Sbjct: 139 LGALVNSQKVMVFMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSD-EAVRQGLKEYS 197
Query: 201 GFRTVPQVFINGNCVGGGSDVK 266
+ T PQ++ +G +GG VK
Sbjct: 198 NWPTYPQLYFDGELIGGLDVVK 219
Score = 30.7 bits (66), Expect = 0.98
Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 18 IQQFLKAALSKAKVVVFSKS--YCPYCKLAKAVFEQVKQPIKVIELNERDDGNTIQDNLA 191
++ LK +S ++++F K P C ++ + + + + + + ++ L
Sbjct: 243 LEDRLKKLVSSQRLMLFMKGDRETPKCGFSRTIVDLLNKARADYHTFDILEDEEVRQGLK 302
Query: 192 QLTGFRTVPQVFINGNCVGGGSDVK 266
+ + + T PQ++++G VGG VK
Sbjct: 303 KFSNWPTYPQLYLDGELVGGLDVVK 327
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 30 LKAALSKAKVVVFSKS--YCPYCKLAKAVFEQVKQ-PIKVIELNERDDGNTIQDNLAQLT 200
L A ++ KV+VF K P C ++ + E + IK + D ++ L + +
Sbjct: 139 LGALVNSQKVMVFMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSD-EAVRQGLKEYS 197
Query: 201 GFRTVPQVFINGNCVGGGSDVK 266
+ T PQ++ +G +GG VK
Sbjct: 198 NWPTYPQLYFDGELIGGLDVVK 219
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 123 KQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 272
++P+++ E+ + Q + LT + P ++I GN VGG ++KAL
Sbjct: 110 EKPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 123 KQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 272
++P+++ E+ + Q + LT + P ++I GN VGG ++KAL
Sbjct: 110 EKPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159
>Z98866-2|CAB11547.1| 142|Caenorhabditis elegans Hypothetical
protein Y49E10.2 protein.
Length = 142
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +3
Query: 18 IQQFLKAALSKAKVVVFSKSY-----CPYCKLAKAVFEQVKQPIKVIELNERDDGNTIQD 182
+++ + + K VVVF K C + + K V + +K + N D +++
Sbjct: 34 VRKRIDGIVKKDDVVVFMKGTQQEPACGFSRNVKLVLDF--HNVKFQDYNVLTD-QELRE 90
Query: 183 NLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 302
+ + + T+PQV++ G VGG + ++++ G++ L
Sbjct: 91 GVKIFSEWPTIPQVYVKGEFVGGCDILISMHKDGEISDFL 130
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 QQFLKAALS-KAKVVVFSKSYCPYCKLAKAVFE 116
Q LK + S + K+ +++YC YC+ AK V E
Sbjct: 312 QNSLKCSGSGRCKINTVTRNYCSYCRYAKCVSE 344
>Z75554-9|CAA99952.2| 278|Caenorhabditis elegans Hypothetical
protein ZC455.11 protein.
Length = 278
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 311 NFKLIVLLLFAYLNLYFGVHIKCYLRFKLIQGCLCSYIYVLTNPFKKNVLLNSLL-SRRQ 487
NF + + L+ + + C +F+ + GC S+ LT F+ ++ ++ +
Sbjct: 127 NFPIYIFLITTSIVCNTVLFKVCNFQFERVDGC-ASFYCSLTTCFQSYAVITRIIYTSTN 185
Query: 488 I*LSVVFR*NLIFKNICSCCNLFFNLQKCSL 580
I S + LIF + C + +LQK +L
Sbjct: 186 IVFSTILSIQLIFLS-CKSTKISSDLQKANL 215
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 253 PPPTQLPFIKT*GTVLKP 200
PPPT+LP I T GT P
Sbjct: 425 PPPTRLPLITTIGTTTNP 442
>Z75549-2|CAA99916.1| 313|Caenorhabditis elegans Hypothetical
protein T19C4.2 protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +2
Query: 497 SVVFR*NLIFKNICSCCNLFFNLQKCSLDSPQLADQILRMAVNIQIDIPTERAL 658
+++F + F+ +C+ C+L N++ CS+ + M N I I A+
Sbjct: 168 NLLFTPLIYFQGVCTLCSLICNIKSCSIVWKASIEMKANMEANFLILITVTSAV 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,516,237
Number of Sequences: 27780
Number of extensions: 300644
Number of successful extensions: 833
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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