Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K08
(772 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 110 5e-24
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 110 5e-24
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 110 5e-24
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 110 5e-24
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 109 8e-24
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 101 2e-21
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 83 8e-16
AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1 p... 38 0.053
AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1 p... 38 0.053
AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1 p... 38 0.053
AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1 p... 38 0.053
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 110 bits (265), Expect = 5e-24
Identities = 49/110 (44%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Frame = +1
Query: 430 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMF 600
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 36 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 95
Query: 601 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLK 750
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 96 QAFFLVADDIMDSSLTRRGQTCWYQKPGVGLD-AINDANLLEACIYRLLK 144
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 110 bits (265), Expect = 5e-24
Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 3/160 (1%)
Frame = +1
Query: 280 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---L 450
W + R +S M + EK+ F +++ L + ++ P+IGD L
Sbjct: 55 WTEEPRALCSSLRMNGDQNSDVYAQEKQDFVQHFSQIVRVL-TEDEMGH-PEIGDAIARL 112
Query: 451 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDI 630
K++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+ QA+ +V DDI
Sbjct: 113 KEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI 172
Query: 631 MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLK 750
MD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 173 MDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLK 211
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 110 bits (265), Expect = 5e-24
Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 3/160 (1%)
Frame = +1
Query: 280 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---L 450
W + R +S M + EK+ F +++ L + ++ P+IGD L
Sbjct: 54 WTEEPRALCSSLRMNGDQNSDVYAQEKQDFVQHFSQIVRVL-TEDEMGH-PEIGDAIARL 111
Query: 451 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDI 630
K++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+ QA+ +V DDI
Sbjct: 112 KEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI 171
Query: 631 MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLK 750
MD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 172 MDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLK 210
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 110 bits (265), Expect = 5e-24
Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 3/160 (1%)
Frame = +1
Query: 280 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---L 450
W + R +S M + EK+ F +++ L + ++ P+IGD L
Sbjct: 54 WTEEPRALCSSLRMNGDQNSDVYAQEKQDFVQHFSQIVRVL-TEDEMGH-PEIGDAIARL 111
Query: 451 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDI 630
K++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+ QA+ +V DDI
Sbjct: 112 KEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI 171
Query: 631 MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLK 750
MD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 172 MDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLK 210
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 109 bits (263), Expect = 8e-24
Identities = 49/110 (44%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Frame = +1
Query: 430 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMF 600
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 29 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 88
Query: 601 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLK 750
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK
Sbjct: 89 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLK 137
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 101 bits (243), Expect = 2e-21
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Frame = +1
Query: 430 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMF 600
P+IGD LK++L YN +GGK+ R +T ++++ + P K +L+ A +GWCVE+
Sbjct: 31 PEIGDAIARLKEVLEYNAIGGKYNRRLTVAVAFRELVDPRKQDADSLQRAWTVGWCVELL 90
Query: 601 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLK 750
QA+ +V DDIMD S RRG CWY++P VG+ A +D+ L+ + ++ LK
Sbjct: 91 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AIDDANLLEACIYPLLK 139
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 83.4 bits (197), Expect = 8e-16
Identities = 38/110 (34%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Frame = +1
Query: 430 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMF 600
P+ GD LK++L YN +GGK+ RG+ +++++ + +P K+ +L+ A +GW ++
Sbjct: 4 PETGDATARLKEVLEYNAIGGKYHRGLMVLVAFRELVEPRKLDADSLQWAPTVGWYAQLL 63
Query: 601 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLK 750
QA+ +V DDIMD S +G WY++ +G+ A ND++L+ + ++ LK
Sbjct: 64 QAFFLVADDIMDSSLTCQGQISWYQKLGMGLD-AINDAILLEACIYCLLK 112
>AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 37.5 bits (83), Expect = 0.053
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 295 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 465
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 466 YNLVGGKHTRGITTV-ISYKTI 528
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 37.5 bits (83), Expect = 0.053
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 295 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 465
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 466 YNLVGGKHTRGITTV-ISYKTI 528
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 37.5 bits (83), Expect = 0.053
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 295 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 465
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 466 YNLVGGKHTRGITTV-ISYKTI 528
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 37.5 bits (83), Expect = 0.053
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 295 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 465
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 466 YNLVGGKHTRGITTV-ISYKTI 528
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,522,200
Number of Sequences: 237096
Number of extensions: 2357072
Number of successful extensions: 7774
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7774
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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