Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K08
(772 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p pro... 120 3e-27
AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl pyr... 120 3e-27
AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p pro... 120 3e-27
AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-P... 120 3e-27
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P... 31 1.3
AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p pro... 30 4.0
AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeran... 30 4.0
AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA... 30 4.0
BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p pro... 29 9.3
BT022889-1|AAY55305.1| 416|Drosophila melanogaster IP12479p pro... 29 9.3
AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA... 29 9.3
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 29 9.3
>AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p
protein.
Length = 419
Score = 120 bits (288), Expect = 3e-27
Identities = 52/136 (38%), Positives = 84/136 (61%)
Frame = +1
Query: 352 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 531
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 532 KPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 711
+ +T +KLA LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200
Query: 712 SLLIHSSLFEFLKTNF 759
+L+I ++++ LK +F
Sbjct: 201 ALMIENAMYAILKKHF 216
>AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl
pyrophosphate synthase protein.
Length = 380
Score = 120 bits (288), Expect = 3e-27
Identities = 52/136 (38%), Positives = 84/136 (61%)
Frame = +1
Query: 352 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 531
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 43 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 102
Query: 532 KPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 711
+ +T +KLA LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 103 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 161
Query: 712 SLLIHSSLFEFLKTNF 759
+L+I ++++ LK +F
Sbjct: 162 ALMIENAMYAILKKHF 177
>AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p
protein.
Length = 419
Score = 120 bits (288), Expect = 3e-27
Identities = 52/136 (38%), Positives = 84/136 (61%)
Frame = +1
Query: 352 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 531
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 532 KPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 711
+ +T +KLA LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200
Query: 712 SLLIHSSLFEFLKTNF 759
+L+I ++++ LK +F
Sbjct: 201 ALMIENAMYAILKKHF 216
>AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-PA
protein.
Length = 419
Score = 120 bits (288), Expect = 3e-27
Identities = 52/136 (38%), Positives = 84/136 (61%)
Frame = +1
Query: 352 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 531
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 532 KPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 711
+ +T +KLA LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200
Query: 712 SLLIHSSLFEFLKTNF 759
+L+I ++++ LK +F
Sbjct: 201 ALMIENAMYAILKKHF 216
>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
protein.
Length = 4899
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = -3
Query: 770 GLVXKLVFRNSNKELCIKRESLKAHVMPTSGRRYQQGMPRRTLEPSIMSSSTMQYA*NIS 591
G + ++ F EL +K+ SL+A +MPT + Q + + + + T+ A + S
Sbjct: 2518 GQIMEMGFTRRTVELALKQLSLQAEIMPTPEQIVQWILEHPDVCANTIEEDTLPLASSAS 2577
Query: 590 THHPSLQAN 564
+H P ++
Sbjct: 2578 SHDPEADSD 2586
>AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p
protein.
Length = 338
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 562 KLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 663
KLA ++G V+M +++DDI D S +RRG+P
Sbjct: 57 KLA-QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeranyl
pyrophosphate synthaseprotein.
Length = 338
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 562 KLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 663
KLA ++G V+M +++DDI D S +RRG+P
Sbjct: 57 KLA-QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA
protein.
Length = 338
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 562 KLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 663
KLA ++G V+M +++DDI D S +RRG+P
Sbjct: 57 KLA-QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p
protein.
Length = 612
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +1
Query: 445 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 615
W+ +H + + +T+V++ TI + +K A L W + M YCI
Sbjct: 334 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 390
>BT022889-1|AAY55305.1| 416|Drosophila melanogaster IP12479p
protein.
Length = 416
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +1
Query: 445 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 615
W+ +H + + +T+V++ TI + +K A L W + M YCI
Sbjct: 138 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 194
>AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA
protein.
Length = 572
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +1
Query: 445 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 615
W+ +H + + +T+V++ TI + +K A L W + M YCI
Sbjct: 294 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 350
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 28.7 bits (61), Expect = 9.3
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 691 CPLPDADTNRACRVERLNHP*CHPAQCNMPETFRHTIPAYRP 566
CP T R P C PA P T R TIP RP
Sbjct: 1994 CPQAPVTTQRPRCYPGSKDPECQPATYLPPTTARTTIPTVRP 2035
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,061,971
Number of Sequences: 53049
Number of extensions: 763510
Number of successful extensions: 1922
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -