Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K06
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 150 1e-37
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 145 4e-36
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 142 4e-35
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 130 2e-31
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 126 4e-30
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 121 1e-28
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 100 2e-22
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 34 0.015
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 34 0.020
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 33 0.035
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 29 0.76
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 28 1.0
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 3.1
SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces pombe... 27 3.1
SPAC24C9.12c |||glycine hydroxymethyltransferase |Schizosaccharo... 26 4.1
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 26 5.4
SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase Alg11|Schiz... 26 5.4
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 26 5.4
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 26 5.4
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 25 7.1
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 7.1
SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces po... 25 7.1
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 25 9.4
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 25 9.4
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 9.4
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 25 9.4
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 150 bits (364), Expect = 1e-37
Identities = 72/190 (37%), Positives = 120/190 (63%), Gaps = 5/190 (2%)
Frame = +2
Query: 86 LSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPS--PHNL 259
L+ +VGFDS+ Q+ K I+ GF FN++ +G +G GKSTL+++LF+ ++ S +
Sbjct: 9 LNNYVGFDSITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTLFSAHLMDSKGRLDYQA 68
Query: 260 P---TVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYLQEE 430
P T ++ + + E+ V+L+L + DT GYGDQ+N + ++ ++ YI Q +YL+ E
Sbjct: 69 PYRQTTEIHVTSQVVRENRVQLQLNLIDTPGYGDQINNDKCWEPIIKYIRDQHSSYLRRE 128
Query: 431 LKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTE 610
L R D+R+H CL+FI PTGH L+ ID+ +K+L VN++P+IAK+D+++ E
Sbjct: 129 LNSHRE-KRLQDTRVHCCLFFIRPTGHSLRPIDIAVLKRLTEVVNVVPVIAKSDSLTLEE 187
Query: 611 LQRFKSKIMQ 640
FK +I +
Sbjct: 188 RAAFKQQIRE 197
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 145 bits (352), Expect = 4e-36
Identities = 77/197 (39%), Positives = 124/197 (62%), Gaps = 9/197 (4%)
Frame = +2
Query: 83 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNL- 259
+L+G+VGF SLP+Q + ++ GF FN+L +GE+G GKSTL+++L N +V P+ +L
Sbjct: 71 QLNGYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVYP-PTQKSLT 129
Query: 260 --------PTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEA 415
PTV + + E+ E+ + L+L + DT G+GD ++ D ++ V+ I+ +++
Sbjct: 130 GDFGVNPEPTVMINSSAVEIVENGISLQLNVIDTPGFGDFIDNTDCWQPVLTDIEGRYDQ 189
Query: 416 YLQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADT 595
YL EL+ S+ D R+H C++FI PTGH + +++L M L KVNIIPIIAKADT
Sbjct: 190 YL--ELEKHNPRSTIQDPRVHACIFFIQPTGHAISAMELRVMLALHEKVNIIPIIAKADT 247
Query: 596 ISKTELQRFKSKIMQXL 646
++ EL K I++ +
Sbjct: 248 LTDDELNFTKEMILRDI 264
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 142 bits (344), Expect = 4e-35
Identities = 71/189 (37%), Positives = 117/189 (61%), Gaps = 6/189 (3%)
Frame = +2
Query: 98 VGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSP------HNL 259
VG LP+Q +NG F ++ GE+GLGK+T ++LF+T ++S P H
Sbjct: 9 VGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTIKSHMGPEKVRAKHAE 68
Query: 260 PTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYLQEELKI 439
TV+++ ELEE N L+LT+ DT G+GD +N +++VV++I+ Q E+Y++++ +
Sbjct: 69 KTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINNSGCWESVVEFIEDQHESYMRQDQQP 128
Query: 440 KRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTELQR 619
R D R+H CLYF+ P +G++ +DL MK + +VN+IP+IAKAD ++ +L
Sbjct: 129 DRR--KIIDMRIHACLYFLRPVRNGVRPMDLEAMKHISKRVNLIPVIAKADMYTRRDLAL 186
Query: 620 FKSKIMQXL 646
+K++I Q L
Sbjct: 187 YKTRISQVL 195
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 130 bits (313), Expect = 2e-31
Identities = 66/199 (33%), Positives = 112/199 (56%)
Frame = +2
Query: 41 DVEPTKAEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLF 220
D P ++ T ++G + Q S+ +NG N++ +GE+ LGK+T ++S
Sbjct: 80 DEVPNSNGKSIPTFHPCNNIGINDFNHQHYSRVCRNGIDINLIVVGESSLGKTTFVNSFL 139
Query: 221 NTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYID 400
+N +++ P T+ H L + + + LTI DT G+GD+ + + ++ + +
Sbjct: 140 QSN-DTNFRPKK--TMDFVEHKATLSDGDQKFNLTIVDTPGFGDKSDNSNCWRPIATNLL 196
Query: 401 AQFEAYLQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPII 580
+ AY Q E+K+ R S DSR+H CL+FI P GH L+ +++ MKK+D VNIIP+I
Sbjct: 197 HRLNAYFQNEVKMDRETSEI-DSRIHGCLFFINPNGHRLQPLEIYIMKKIDQFVNIIPVI 255
Query: 581 AKADTISKTELQRFKSKIM 637
KADT++ EL FK +++
Sbjct: 256 GKADTMTSDELNHFKKRVI 274
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 126 bits (303), Expect = 4e-30
Identities = 65/196 (33%), Positives = 114/196 (58%), Gaps = 7/196 (3%)
Frame = +2
Query: 68 TLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSL-------FNT 226
T RT G + + L + KS + G N++ +G+ GLG++ +++L N
Sbjct: 24 TARTHITKGQIDIE-LTMRTTKKSSKKGIPLNLMVVGDVGLGRTAFINTLCEKPLIRHNN 82
Query: 227 NVESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQ 406
N + + + P + T + E ++ LT+ DT +G+ ++ E++F ++ YI++Q
Sbjct: 83 NFDPAEASSVSPVEIVPYQTDIILEDGTKINLTVLDTPHFGEAIDNENNFDIILQYIESQ 142
Query: 407 FEAYLQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAK 586
++ L+EE +IKR+ + + D R+H +YFI PTGHGL+ +D+ M++L +VNIIP IAK
Sbjct: 143 YDNVLEEESRIKRN-ARFCDDRVHALIYFISPTGHGLRELDIELMRRLAPRVNIIPAIAK 201
Query: 587 ADTISKTELQRFKSKI 634
AD+++ ELQ K I
Sbjct: 202 ADSLTAQELQTTKEMI 217
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 121 bits (291), Expect = 1e-28
Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)
Frame = +2
Query: 98 VGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLP----- 262
+ DSLP + + + I+ G +G GK+T ++LF T+++ S
Sbjct: 11 LNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAK 70
Query: 263 -TVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYL---QEE 430
T+++K + +EE + LT+ DT G+GD ++ + V +Y+D Q E YL Q
Sbjct: 71 KTLEVKKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNS 130
Query: 431 LKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTE 610
L++ R D+R+HVCLYFI P G+ +D++ MK+L T VN++P+IAKADT + E
Sbjct: 131 LRVPRK-----DTRVHVCLYFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPE 185
Query: 611 LQRFKSKIMQXL 646
L + K KI + L
Sbjct: 186 LTQIKQKIRRIL 197
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 100 bits (240), Expect = 2e-22
Identities = 46/127 (36%), Positives = 78/127 (61%)
Frame = +2
Query: 266 VKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYLQEELKIKR 445
++++ ++ E + LT+ + G+GD+++ SF+ V Y+++QF+ L EE KIKR
Sbjct: 61 LEIREFNADILEDEFHVDLTVIEVNGFGDKIDNSASFEVVTHYLESQFDQALIEESKIKR 120
Query: 446 SLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTELQRFK 625
+ S + D+R+ LYFI P GH L DL MK+ +VN+IP+I ++ ++ EL+ FK
Sbjct: 121 N-SKFTDTRVDALLYFIAPRGHCLSEFDLEAMKRFSKRVNVIPVIGNSNAFTEEELKNFK 179
Query: 626 SKIMQXL 646
IM+ L
Sbjct: 180 DVIMKDL 186
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 34.3 bits (75), Expect = 0.015
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLF-NTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTI 328
++F +L IG++G+GKS L+ +T ES S V K T+ELE V KL I
Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIG---VDFKIRTFELEGKTV--KLQI 61
Query: 329 CDTVG 343
DT G
Sbjct: 62 WDTAG 66
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 173 IGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRL 316
+G G GKSTL+ ++ + VE+ PSP + T AH+ + E++++ +
Sbjct: 476 VGHNGCGKSTLLRAIGDYKVENFPSPDEVKTC-FVAHSLQGEDTSMAI 522
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 33.1 bits (72), Expect = 0.035
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++ +L IG++G+GKS L+ F+ E S +P + T+ + +E R+KL I
Sbjct: 8 YLIKLLLIGDSGVGKSCLL-LRFS---EDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 332 DTVG 343
DT G
Sbjct: 64 DTAG 67
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 28.7 bits (61), Expect = 0.76
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNT--NVESSPSPHNLPTVKLKAHTYELEESNVRLKLT 325
++F + IG++G+GKS L+ N+ES T+ ++ T + N ++K
Sbjct: 9 YLFKTVLIGDSGVGKSNLLMRFTRNEFNIESK------STIGVEFATRNIVLDNKKIKAQ 62
Query: 326 ICDTVG 343
I DT G
Sbjct: 63 IWDTAG 68
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 167 LCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEES 304
LC G G GKSTLM ++ N VE P+ +L TV ++ ++++ES
Sbjct: 465 LC-GPNGSGKSTLMRAIVNGQVEGFPT--HLRTVYVE---HDIDES 504
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 80 LKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFN 223
+ L GH+ + Q V ++I G +++ +G G GKS L+D + +
Sbjct: 550 IPLVGHMDEQTKLYQWVRQTIVLGEGNSVIIVGPRGSGKSVLVDDILS 597
>SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 311 RLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEA 415
R+ L C T G + E+S+K V+D D + A
Sbjct: 166 RVCLDTCHTFAAGYDIRTEESYKKVIDEFDEKVGA 200
>SPAC24C9.12c |||glycine hydroxymethyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 362 KEDSFKAVVDYID--AQFEAYLQEEL 433
KE F VVDYID F A LQ+EL
Sbjct: 399 KEQDFVRVVDYIDRALTFAANLQKEL 424
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +2
Query: 104 FDSLPDQLVSKSIQNGFVFNILCIGET--GLGKSTLM--DSLFNTN 229
FD LP + + +QN FVF+ I E GL S + +S+++TN
Sbjct: 429 FDYLPARFICLKVQNPFVFHHSFIEEAKKGLNLSQWVQYNSVYSTN 474
>SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase
Alg11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 471
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 497 CPTGHGLKSIDLVCMKKLDTKV-NIIPIIAKADTISKTELQR 619
C G G + + +K + T+ N+I ++ D +SK E+ R
Sbjct: 64 CNAGGGGERVLWTAVKSVQTEFPNVISVVYTGDNVSKAEILR 105
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 122 QLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHN-LPTVKLKAHTYEL 295
QL+ +I +G+ +I G+TG GK+ M S S N L T++ K Y+L
Sbjct: 558 QLIQSAI-DGYNVSIFAYGQTGSGKTYTMSSQDGMIAMSIKHIFNYLSTLREKGWVYKL 615
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 5.4
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 122 QLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPT-VKLKAHTYELE 298
QL+ +S +G+ I G+TG GK+ M S S +N T +K + Y +E
Sbjct: 546 QLI-QSAMDGYNVCIFAYGQTGSGKTHTMSSNTGMIPSSVRMIYNRSTSLKERGWEYRME 604
Query: 299 ESNVRL-KLTICDTVGYGDQVNK 364
+ + TI D + G++ K
Sbjct: 605 GQFLEIYNETIIDLLASGNEEEK 627
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 35 AIDVEPTKAEPTLRTLKLSGHVGFDSLPDQLVSKSIQ 145
A D E K E L+ LKLS H L ++ S +I+
Sbjct: 532 AFDAESDKLERELQQLKLSSHNSMLQLDQRIQSINIE 568
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 116 PDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTN 229
P++LVS + N + GK+TL DSL +N
Sbjct: 6 PEKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASN 43
>SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 508
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 341 GYGDQVNKEDSFKAVVDYIDAQFEAYLQEELKIKRS 448
G GD +NK DS K+V++ + + E + Q +L + S
Sbjct: 12 GSGDDLNKLDSLKSVLNDVLSSLERF-QVDLDVATS 46
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 260 PTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAV 385
P KL ++ + KLT+ + V Y VN E+SF V
Sbjct: 37 PYEKLMGKLQQVRKFLPGQKLTLAEKVLYSHLVNPEESFSGV 78
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.0 bits (52), Expect = 9.4
Identities = 24/100 (24%), Positives = 38/100 (38%)
Frame = +2
Query: 164 ILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVG 343
I+ +GETG GKST + N + + + A + + + VG
Sbjct: 115 IVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVG 174
Query: 344 YGDQVNKEDSFKAVVDYIDAQFEAYLQEELKIKRSLSSYH 463
Y + + S K + Y+ + L EL LS YH
Sbjct: 175 YSIRFDDTTSKKTRIKYLT---DGMLLRELINDPILSQYH 211
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 161 NILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKL 274
N + IGE G+GK+++ + L ++ P NL KL
Sbjct: 204 NPVLIGEPGVGKTSIAEGLARRIIDDD-VPANLSNCKL 240
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 119 DQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVE 235
D V K +NGFV I G G+ + + S+ NVE
Sbjct: 880 DAYVIKVFKNGFVVFIARFGLEGIVYTKSLSSVLEPNVE 918
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,570,502
Number of Sequences: 5004
Number of extensions: 51741
Number of successful extensions: 190
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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