Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K06
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 37 0.016
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 33 0.15
03_06_0579 + 34870958-34874578 33 0.26
05_06_0082 - 25425050-25425479,25426551-25426783 32 0.45
06_03_0414 - 20548577-20549006,20553521-20553744 31 0.60
03_04_0102 + 17288910-17289767 31 0.60
05_03_0286 - 11623575-11624063,11625098-11625262 31 1.0
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 31 1.0
09_02_0464 - 9591139-9591571,9592601-9592818 30 1.4
05_07_0127 - 27872803-27873238,27873842-27874059 30 1.4
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 30 1.8
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 30 1.8
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 30 1.8
06_01_0102 + 834660-834911,835460-835568,835891-836006,836116-83... 29 2.4
01_06_1343 - 36461476-36461961,36463355-36463519 29 2.4
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 29 3.2
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 29 3.2
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 29 3.2
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 29 3.2
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 29 3.2
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 29 4.2
05_01_0036 + 253734-253904,255216-255707 29 4.2
10_08_0842 - 20954712-20957738 28 5.6
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721... 28 5.6
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 28 5.6
11_03_0052 + 9330778-9330816,9330963-9331174,9331498-9333634 28 7.4
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 7.4
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 27 9.7
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 27 9.7
06_03_1387 - 29820358-29821035 27 9.7
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 27 9.7
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 27 9.7
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 27 9.7
05_01_0372 - 2913518-2916562,2916674-2917528 27 9.7
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +2
Query: 158 FNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDT 337
F IL IG++G+GKS+L+ S + PT+ + L +LKLTI DT
Sbjct: 20 FKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDT 79
Query: 338 VG 343
G
Sbjct: 80 AG 81
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 158 FNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDT 337
F IL IG++ +GKS+L+ S + S PT+ + L + +LKLTI DT
Sbjct: 13 FKILLIGDSAVGKSSLLVSFVSA---SHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDT 69
Query: 338 VG 343
G
Sbjct: 70 AG 71
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
F N+L +G+TG+GKS ++S+F + +S S T +K E+ +K +
Sbjct: 583 FSCNVLVLGKTGVGKSATINSIFGED-KSKTSAFLPATTAVK----EISGVVGGVKFRVV 637
Query: 332 DTVGYGDQVNKEDSFKAVVDYI 397
DT G G E S + V++ +
Sbjct: 638 DTPGLGTTHMDEKSNRKVLNSV 659
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F ++ IG++G+GKS L+ S F N S S T+ ++ T L+ +K I
Sbjct: 16 YLFKVVLIGDSGVGKSNLL-SRFTKNEFSLESK---STIGVEFATRSLQVDGKVIKAQIW 71
Query: 332 DTVG 343
DT G
Sbjct: 72 DTAG 75
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 31.5 bits (68), Expect = 0.60
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F ++ IG++G+GKS L+ S F N S S T+ ++ T L+ +K I
Sbjct: 13 YLFKVVLIGDSGVGKSNLL-SRFTRNEFSLESK---STIGVEFATRSLQVDGKVVKAQIW 68
Query: 332 DTVG 343
DT G
Sbjct: 69 DTAG 72
>03_04_0102 + 17288910-17289767
Length = 285
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 616 LQLSLGDGVSLSDDRYDIHFGIEFLHTHQINGLQTMTCWTDEVQ 485
LQ + DG L++ R H +LH I+ T T WT + Q
Sbjct: 150 LQAAFADGGLLTNVRNHFHHCAAYLHVQPIDADPTWTAWTGQAQ 193
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F ++ IG++G+GKS ++ S F N S S T+ ++ T L+ +K I
Sbjct: 11 YLFKMVLIGDSGVGKSNIL-SRFTRNHFSLDSK---STIGVEFATKSLQMEGKTIKAQIW 66
Query: 332 DTVG 343
DT G
Sbjct: 67 DTAG 70
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F + IG+TG+GKS L+ L T+ P H+L T+ ++ + N +KL I
Sbjct: 5 YLFKYIIIGDTGVGKSCLL--LQFTDKRFQP-VHDL-TIGVEFGARMITIDNKPIKLQIW 60
Query: 332 DTVG 343
DT G
Sbjct: 61 DTAG 64
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F ++ IG++G+GKS L+ S F N S S T+ ++ T + + +K I
Sbjct: 11 YLFKVVLIGDSGVGKSNLL-SRFTRNEFSLESK---STIGVEFATRSIRVDDKVVKAQIW 66
Query: 332 DTVG 343
DT G
Sbjct: 67 DTAG 70
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F ++ IG++G+GKS L+ S F N S S T+ ++ T + + +K I
Sbjct: 11 YLFKVVLIGDSGVGKSNLL-SRFTRNEFSLESK---STIGVEFATRSIHVDDKVVKAQIW 66
Query: 332 DTVG 343
DT G
Sbjct: 67 DTAG 70
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F +L IG++G+GKS L+ + S + T+ + +E+ +KL I
Sbjct: 23 YLFKLLLIGDSGVGKSCLLLRF----ADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 78
Query: 332 DTVG 343
DT G
Sbjct: 79 DTAG 82
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F +L IG++G+GKS L+ + S + T+ + +E+ +KL I
Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRF----ADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 332 DTVG 343
DT G
Sbjct: 63 DTAG 66
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F +L IG++G+GKS L+ + S + T+ + +E+ +KL I
Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRF----ADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 332 DTVG 343
DT G
Sbjct: 63 DTAG 66
>06_01_0102 +
834660-834911,835460-835568,835891-836006,836116-836235,
836398-836436,836678-836811,837035-837299,837615-837698,
837943-838003,838748-838810,839174-839216,839632-839711,
839831-840267
Length = 600
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 119 DQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPS---PHNLPTVKLKA 280
D+++ +N I IG TG+GKST+M+ L+ + SSP P T ++KA
Sbjct: 80 DKILPYLTENNDFMVIGVIGPTGVGKSTIMNELYGYD-GSSPGMLPPFATQTEEIKA 135
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F I+ IG++G+GKS ++ S F N S + V+ T ++E + K I
Sbjct: 11 YLFKIVLIGDSGVGKSNIL-SRFTRNEFFLESKSTI-GVEFATRTLQIEGKTI--KAQIW 66
Query: 332 DTVG 343
DT G
Sbjct: 67 DTAG 70
>08_02_0076 + 11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 592 VSLSDDRYDIHFGIEFLHTHQINGLQTMTC 503
+S+ +DR+D +EFL + + GL +TC
Sbjct: 1433 LSIEEDRHDPDGHVEFLTDNHVKGLSFLTC 1462
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 158 FNILCIGETGLGKSTLMDSLFNTNVESSPSPHN--LPTVKLKAHTYELEESNVRL 316
F+++ +G GK+TL++ + + ++ PH+ +PTV L + +E++NV+L
Sbjct: 151 FHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGL--NIGRIEDANVKL 203
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++ +L IG++G+GKS L+ + + +S + T+ + +E R+KL I
Sbjct: 14 YLIKLLLIGDSGVGKSCLLLRFSDGSFTTS----FITTIGIDFKIRTIELDGKRIKLQIW 69
Query: 332 DTVG 343
DT G
Sbjct: 70 DTAG 73
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 577 DRYDIHFGIEFLHTHQINGLQTMTCW 500
D Y + F EFLH H ++ L T CW
Sbjct: 261 DEYGL-FSFEFLHRHGLHLLGTTVCW 285
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++ +L IG++G+GKS L+ L ++ + S + K T EL+ R+KL I
Sbjct: 14 YLIKLLLIGDSGVGKSCLL--LRFSDGSFTTSFITTIGIDFKIRTVELD--GKRIKLQIW 69
Query: 332 DTVG 343
DT G
Sbjct: 70 DTAG 73
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F ++ IG++ +GKS L+ + + + H+ T+ ++ T ++ + +K I
Sbjct: 12 YLFKVVIIGDSAVGKSNLL----SRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIW 67
Query: 332 DTVG 343
DT G
Sbjct: 68 DTAG 71
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F ++ IG++G+GKS L+ S F N S T+ ++ T L +K I
Sbjct: 13 YLFKVVLIGDSGVGKSNLL-SRFTRNEFCLESK---STIGVEFATRTLHVEGKIIKAQIW 68
Query: 332 DTVG 343
DT G
Sbjct: 69 DTAG 72
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
F IL +G+TG+GKS ++S+F+ +V + + T K++ E+ + +K+ +
Sbjct: 382 FSCTILVLGKTGVGKSATINSIFD-DVRLETNAFDTSTRKVQ----EVVGAVEGIKVKVI 436
Query: 332 DTVG 343
DT G
Sbjct: 437 DTPG 440
>04_04_0582 +
26369537-26369914,26371598-26371887,26371985-26372156,
26372271-26372393,26372499-26372627,26372785-26372979,
26373128-26373214,26373296-26373568,26374166-26374273,
26374363-26374686
Length = 692
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +2
Query: 173 IGETGLGKSTLMDSLFNTNVESSPSPHNL------PTVKLKAHTYELEESNVRLKLTICD 334
+G +G GKSTL+D+L ++ N+ + A Y ++ N+ LT+ +
Sbjct: 84 MGPSGSGKSTLLDALAGRLAANAFLSGNVLLNGRKAKLSFGAAAYVTQDDNLIGTLTVRE 143
Query: 335 TVGYGDQVNKED 370
T+GY + D
Sbjct: 144 TIGYSAMLRLPD 155
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F + IG+TG+GKS L+ L T+ P H+L T+ ++ + + +KL I
Sbjct: 5 YLFKYIIIGDTGVGKSCLL--LQFTDKRFQP-VHDL-TIGVEFGARMITVDSRPVKLQIW 60
Query: 332 DTVG 343
DT G
Sbjct: 61 DTAG 64
>11_03_0052 + 9330778-9330816,9330963-9331174,9331498-9333634
Length = 795
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 164 ILCIGETGLGKSTLMDSLFN 223
I +GETG+GKSTLM ++ N
Sbjct: 117 ISILGETGIGKSTLMLTICN 136
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSL 217
F NIL +G+ G+GKST+++S+
Sbjct: 4912 FSCNILVLGKIGVGKSTVINSI 4933
>11_06_0458 +
23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 23 VNMAAIDVEPTKAEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGF--VFNILCIGETGLGK 196
VN + V P +L VG D D+++ KS+ +G + + +G GLGK
Sbjct: 193 VNCKSNHVVPIDRRLPALYAELDALVGIDGPRDEII-KSLDDGEQRMKVVSIVGSGGLGK 251
Query: 197 STLMDSLF 220
STL + ++
Sbjct: 252 STLANQVY 259
>07_03_1486 + 26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 27.5 bits (58), Expect = 9.7
Identities = 24/103 (23%), Positives = 47/103 (45%)
Frame = +2
Query: 110 SLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTY 289
++ Q++ I NG I + ET + + + F++ + S P+ NLP + L TY
Sbjct: 1215 AIDQQVIGNDIANGTNCIIFLVSETIPWE--MQKARFSSLLASIPAKSNLPLLILSGDTY 1272
Query: 290 ELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAY 418
EE + + ++ D +G G ++ + V+ + E Y
Sbjct: 1273 N-EEYDYASQ-SVIDRLGLGCLSEEKIASCLVIFLVADDMEGY 1313
>06_03_1387 - 29820358-29821035
Length = 225
Score = 27.5 bits (58), Expect = 9.7
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Frame = +2
Query: 143 QNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKL 322
+ +VF ++ IG++ +GK+ L+ T E + T+ ++ T +E R+K
Sbjct: 3 EEDYVFKVVVIGDSAVGKTQLLGRF--TKDEFFIDSKS--TIGIEFQTRTVEIGGKRVKA 58
Query: 323 TICDTVGYGDQVNKEDSFKAVVD-YIDAQFEAYLQEELKIKRSLSS----YHDSRLH 478
I DT G ++ ++AV Y A L ++ +RS HD R H
Sbjct: 59 QIWDTAG-------QERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAH 108
>05_07_0003 +
26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 95 HVGFDSLPDQLV----SKSIQNGFVFNILCIGETGLGKSTLMD 211
+ + S PDQL+ S + NG I +GE+G GKST+++
Sbjct: 398 YFSYPSRPDQLIFDGFSLHVLNGITMAI--VGESGSGKSTVIN 438
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 110 SLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNT-NVESSPSPHNLPTVKLKAHT 286
S ++L S + N+L I + G GK+ ++DSL T + S + + L
Sbjct: 208 SAAEELHSIMCNKNNIRNVLVIADAGHGKTAILDSLVATAGITSQEVTESNSLISL---Y 264
Query: 287 YELEESNVR 313
YE+ E ++R
Sbjct: 265 YEMPEDSLR 273
>05_04_0226 +
19215091-19215172,19215281-19215394,19215508-19215590,
19215682-19215820,19215862-19216191,19216414-19216693,
19216795-19216956,19217134-19217349,19217458-19217495,
19217597-19217760,19217833-19217946,19218042-19218083,
19218180-19218983
Length = 855
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 107 DSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSL 217
+SLP V +S+ +GF I G+TG GK+ M+ +
Sbjct: 255 ESLP---VVRSVMDGFNVCIFAYGQTGTGKTFTMEGI 288
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLF 220
F NIL +G+ G+GKS ++S+F
Sbjct: 660 FSCNILVLGKIGVGKSATINSIF 682
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,880,330
Number of Sequences: 37544
Number of extensions: 344631
Number of successful extensions: 1042
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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