Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K06
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 241 4e-64
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 241 4e-64
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 241 4e-64
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 153 8e-38
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 36 0.033
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 36 0.033
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 34 0.100
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 32 0.40
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 31 0.70
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 31 0.70
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 31 0.70
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 31 0.70
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 30 1.2
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 30 1.6
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 30 1.6
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 29 2.1
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 29 2.1
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 29 2.1
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 29 2.1
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 29 2.8
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 29 2.8
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 29 2.8
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 29 3.8
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 29 3.8
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 29 3.8
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 28 6.6
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC024746-10|AAF60400.2| 483|Caenorhabditis elegans Hypothetical... 28 6.6
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 241 bits (589), Expect = 4e-64
Identities = 105/196 (53%), Positives = 152/196 (77%)
Frame = +2
Query: 59 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVES 238
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN ++
Sbjct: 67 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 126
Query: 239 SPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAY 418
P H L TV+L+ T ++ E +R+KL + +T G+GDQ++K+ S K +VDY+++QFE Y
Sbjct: 127 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 186
Query: 419 LQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTI 598
LQEELK +R L ++DSR+H CLYFI PTGHGLK++DLV +++L +VN+IP+IAK+DT
Sbjct: 187 LQEELKPRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTT 246
Query: 599 SKTELQRFKSKIMQXL 646
K EL RFK+KI+ L
Sbjct: 247 CKDELLRFKAKILSEL 262
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 241 bits (589), Expect = 4e-64
Identities = 105/196 (53%), Positives = 152/196 (77%)
Frame = +2
Query: 59 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVES 238
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN ++
Sbjct: 67 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 126
Query: 239 SPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAY 418
P H L TV+L+ T ++ E +R+KL + +T G+GDQ++K+ S K +VDY+++QFE Y
Sbjct: 127 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 186
Query: 419 LQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTI 598
LQEELK +R L ++DSR+H CLYFI PTGHGLK++DLV +++L +VN+IP+IAK+DT
Sbjct: 187 LQEELKPRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTT 246
Query: 599 SKTELQRFKSKIMQXL 646
K EL RFK+KI+ L
Sbjct: 247 CKDELLRFKAKILSEL 262
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 241 bits (589), Expect = 4e-64
Identities = 105/196 (53%), Positives = 152/196 (77%)
Frame = +2
Query: 59 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVES 238
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN ++
Sbjct: 136 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 195
Query: 239 SPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAY 418
P H L TV+L+ T ++ E +R+KL + +T G+GDQ++K+ S K +VDY+++QFE Y
Sbjct: 196 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 255
Query: 419 LQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTI 598
LQEELK +R L ++DSR+H CLYFI PTGHGLK++DLV +++L +VN+IP+IAK+DT
Sbjct: 256 LQEELKPRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTT 315
Query: 599 SKTELQRFKSKIMQXL 646
K EL RFK+KI+ L
Sbjct: 316 CKDELLRFKAKILSEL 331
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 153 bits (372), Expect = 8e-38
Identities = 76/186 (40%), Positives = 122/186 (65%), Gaps = 6/186 (3%)
Frame = +2
Query: 101 GFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLF-----NTNVESSPSPHNLP- 262
GF + P+Q+ ++++NGF F ++ +G +GLGKST +++LF N N + S H P
Sbjct: 29 GFANFPNQVFRRAVKNGFDFTLMVVGRSGLGKSTFINTLFLAEINNLNEKESAPTHPHPS 88
Query: 263 TVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYLQEELKIK 442
TV+++ +L E++V L LT+ DT G+GD VN ++ +V+Y++++F EE +I
Sbjct: 89 TVRVEEKLVKLVENSVSLNLTLVDTPGFGDAVNNSKCWEPIVNYVESKFFEQFCEETRID 148
Query: 443 RSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTELQRF 622
R D +H+CLYFI P+GHGLK ID+ MK L +VNI+P+I+KAD +++ EL RF
Sbjct: 149 RG-EKIVDKCVHLCLYFIEPSGHGLKPIDIELMKHLHGRVNIVPVISKADCLTRDELLRF 207
Query: 623 KSKIMQ 640
K +I++
Sbjct: 208 KKQIVK 213
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F + IG+ G+GKS L+ F + PH T+ ++ T +E S ++KL I
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQ-FTEKKFMADCPH---TIGVEFGTRIIEVSGQKIKLQIW 65
Query: 332 DTVG 343
DT G
Sbjct: 66 DTAG 69
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F + IG+ G+GKS L+ F + PH T+ ++ T +E S ++KL I
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQ-FTEKKFMADCPH---TIGVEFGTRIIEVSGQKIKLQIW 65
Query: 332 DTVG 343
DT G
Sbjct: 66 DTAG 69
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 33.9 bits (74), Expect = 0.100
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 50 PTKAEPTLRTLKLSGHVGFDSLPDQLVSKS--IQNGFVFNILCIGETGLGKSTLMDSLFN 223
P K T TL G VGFD+ + +G NI G +G+G+S++ S N
Sbjct: 674 PAKRRKTRETLSFLGDVGFDTWTGVTTGMGGRVGDGVTKNI-TRGLSGIGRSSMSSSTGN 732
Query: 224 TNVESSPS 247
TN E + S
Sbjct: 733 TNNEDANS 740
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 164 ILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVG 343
IL IGE+G+GKS+LM V+ P T+ + + R+KL I DT G
Sbjct: 14 ILIIGESGVGKSSLMLRF----VDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAG 69
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 31.1 bits (67), Expect = 0.70
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 2 GRPMSQHVNMAAIDVEPTKAEPT--LRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCI 175
G+ + + ++ A+ E T AEPT L +LS + F L D+ + I + ++ +
Sbjct: 319 GKILDRKDDLLAL-AESTAAEPTAVLDQSQLSTRIAFSFLNDRKLH--IGDFIESRVVLL 375
Query: 176 GETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRL 316
G G GK++++ L +++ +PH PT+ T + N RL
Sbjct: 376 GLDGAGKTSIVRRLKKVQMDTVMAPH--PTIGFNIET--IHYKNYRL 418
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLF-NTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTI 328
++F +L IG++G+GKS L+ +T ES S V K T EL+ + KL I
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIG---VDFKIRTIELDGKTI--KLQI 64
Query: 329 CDTVG 343
DT G
Sbjct: 65 WDTAG 69
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +2
Query: 155 VFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTICD 334
+F +L IG++G+GKS+L+ +++ S + + T+ + ++ + R+KL I D
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRF----ADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWD 65
Query: 335 TVG 343
T G
Sbjct: 66 TAG 68
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLF-NTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTI 328
++F +L IG++G+GKS L+ +T ES S V K T EL+ + KL I
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIG---VDFKIRTIELDGKTI--KLQI 64
Query: 329 CDTVG 343
DT G
Sbjct: 65 WDTAG 69
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +2
Query: 131 SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNV 310
S+ + ++F ++ IG++G+GKS L+ S F N + S T+ ++ T +
Sbjct: 3 SRDDEYDYLFKVVLIGDSGVGKSNLL-SRFTRNEFNLESK---STIGVEFATRSISVEGK 58
Query: 311 RLKLTICDTVG 343
+K I DT G
Sbjct: 59 TVKAQIWDTAG 69
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 155 VFNILCIGETGLGKSTLM----DSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKL 322
+F +L IG++G+GK+ ++ D FNT S+ + K T EL+ ++KL
Sbjct: 9 LFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIG------IDFKIKTIELK--GKKIKL 60
Query: 323 TICDTVG 343
I DT G
Sbjct: 61 QIWDTAG 67
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 155 VFNILCIGETGLGKSTLM----DSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKL 322
+F +L IG++G+GK+ ++ D FNT S+ + K T EL+ ++KL
Sbjct: 9 LFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIG------IDFKIKTIELK--GKKIKL 60
Query: 323 TICDTVG 343
I DT G
Sbjct: 61 QIWDTAG 67
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +2
Query: 131 SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNV 310
S+ + ++F ++ IG++G+GKS L+ S F N S T+ ++ T +
Sbjct: 3 SRDDEYDYLFKVVLIGDSGVGKSNLL-SRFTRNEFHLESK---STIGVEFATRSISVEGK 58
Query: 311 RLKLTICDTVG 343
+K I DT G
Sbjct: 59 TVKAQIWDTAG 69
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLM----DSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLK 319
++F +L IG++G+GK+ ++ D FN + S+ + K T EL+ ++K
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIG------IDFKIRTIELD--GKKIK 58
Query: 320 LTICDTVG 343
L I DT G
Sbjct: 59 LQIWDTAG 66
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLM----DSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLK 319
++F +L IG++G+GK+ ++ D FN + S+ + K T EL+ ++K
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIG------IDFKIRTIELD--GKKIK 58
Query: 320 LTICDTVG 343
L I DT G
Sbjct: 59 LQIWDTAG 66
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLM----DSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLK 319
++F +L IG++G+GK+ ++ D FN + S+ + K T EL+ ++K
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIG------IDFKIRTIELD--GKKIK 58
Query: 320 LTICDTVG 343
L I DT G
Sbjct: 59 LQIWDTAG 66
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 347 GDQVNKEDSFKAVVDYIDAQFEAY--LQEELKIKRSLSSYHDS 469
GD S KA+ ++ D F++Y + + K+S SSYH S
Sbjct: 546 GDNFISSSSSKAIENHYDVPFDSYEIVDKSENTKKSSSSYHAS 588
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 347 GDQVNKEDSFKAVVDYIDAQFEAY--LQEELKIKRSLSSYHDS 469
GD S KA+ ++ D F++Y + + K+S SSYH S
Sbjct: 546 GDNFISSSSSKAIENHYDVPFDSYEIVDKSENTKKSSSSYHAS 588
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 152 FVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 331
++F + IG+TG+GKS L+ L T+ P H+L T+ ++ + ++KL I
Sbjct: 5 YLFKYIIIGDTGVGKSCLL--LQFTDKRFQP-VHDL-TIGVEFGARMVTIDGKQIKLQIW 60
Query: 332 DTVG 343
DT G
Sbjct: 61 DTAG 64
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 29.1 bits (62), Expect = 2.8
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = +2
Query: 95 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTV-K 271
+V ++S ++LV + +G+ +L G+TG GK+ M + F+ V +P +L + +
Sbjct: 62 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFDAAV--TPKNEDLGVIPR 118
Query: 272 LKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFE---AYLQEELKIK 442
HT+ K+ C +Q E +F+ V +++ + L ++ +
Sbjct: 119 AIQHTFR--------KIAECKAQAI-EQGLLEPAFEVSVQFVELYNDDVLDLLSDDRSMS 169
Query: 443 RSLSSYHDSRLHVCLY 490
S+ + DSR + L+
Sbjct: 170 SSIRIHEDSRGEIVLH 185
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +2
Query: 155 VFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKLTICD 334
+F +L IG++G+GKS+L+ +++ S + + T+ + ++ + R+KL I D
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRF----ADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWD 65
Query: 335 T 337
T
Sbjct: 66 T 66
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 83 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKS 199
K SG + + L D +V K+ N F LC GE G+GKS
Sbjct: 15 KASGRIVME-LYDDVVPKTAGN---FRALCTGENGIGKS 49
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 83 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKS 199
K SG + + L D +V K+ N F LC GE G+GKS
Sbjct: 15 KASGRIVME-LYDDVVPKTAGN---FRALCTGENGIGKS 49
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 143 QNGFVFNILCIGETGLGKSTLMDSLFNTNVESSPSPHNLPTVKLKAHTYELEESNVRLKL 322
Q F F I+ +GE +GKS+L+ VE+ S +L T++ + + + L
Sbjct: 8 QKSFKFKIVLLGEGCVGKSSLVLRF----VENKFSCKHLSTIQASFQNKTVNVEDCQADL 63
Query: 323 TICDTVG 343
I DT G
Sbjct: 64 HIWDTAG 70
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
F30H5.3 protein.
Length = 1599
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 482 CLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTIS-KTELQRF 622
CL C G ++++ VCMKK+ ++ PI + + +T+ RF
Sbjct: 1300 CLDATCTCPEGEEAVEDVCMKKMSRPMSTCPIPGQIPFLELRTKAARF 1347
>AC024746-10|AAF60400.2| 483|Caenorhabditis elegans Hypothetical
protein Y110A2AL.2 protein.
Length = 483
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 22 RKHGGDRC*AN*SGTYPTHLETFGTCWF 105
+++ DR +N S PT TFG CWF
Sbjct: 55 KENVSDRASSNKSCRGPTKAPTFGRCWF 82
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 95 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNV 232
+V ++S ++LV + +G+ +L G+TG GK+ M + F+ V
Sbjct: 58 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFDAAV 102
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 95 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNV 232
+V ++S ++LV + +G+ +L G+TG GK+ M + F+ V
Sbjct: 58 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFDAAV 102
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 95 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNV 232
+V ++S ++LV + +G+ +L G+TG GK+ M + F+ V
Sbjct: 58 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFDAAV 102
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 95 HVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNV 232
+V ++S ++LV + +G+ +L G+TG GK+ M + F+ V
Sbjct: 58 YVVYESCVEKLVD-GLFDGYNATVLAYGQTGSGKTHTMGTAFDAAV 102
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 192 PRPVSPIHRILKTKPFCMLLLTSWSGRLSKPTCPESFKVRRVGSALVGSTSIAAMFTC 19
P P+ P + P M L S S + K +FKV VG+A VG T ++ F C
Sbjct: 68 PPPIPPAPEAVTAGPKKMALAPS-STKTYKQK--RTFKVIIVGNAAVGKTCLSFRFCC 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,356,767
Number of Sequences: 27780
Number of extensions: 297917
Number of successful extensions: 891
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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