Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_K06
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    31   0.013
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    31   0.013
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.48 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   2.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +2

Query: 245 SPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQV-NKEDSFKAVVDYIDAQFEAYL 421
           S H L     +  T E+  S    KL+    + +GD++ +  DSF+A +  I+  +   L
Sbjct: 498 STHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGKL 557

Query: 422 QEELKIKRSLSSYHDSRL 475
           +   + + +L  YH  RL
Sbjct: 558 ERTEEQRIALRKYHAPRL 575


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +2

Query: 245 SPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQV-NKEDSFKAVVDYIDAQFEAYL 421
           S H L     +  T E+  S    KL+    + +GD++ +  DSF+A +  I+  +   L
Sbjct: 536 STHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGKL 595

Query: 422 QEELKIKRSLSSYHDSRL 475
           +   + + +L  YH  RL
Sbjct: 596 ERTEEQRIALRKYHAPRL 613


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 164 ILCIGETGLGKSTLMDSLFNTNVESS 241
           +  +G    GK+TL+D+L NT++  S
Sbjct: 148 VTIMGHVDHGKTTLLDALRNTSIAKS 173


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 497 CPTGHGLKSIDLVCMKKLDTKV 562
           CP G  L S  L+C++K+ T +
Sbjct: 64  CPDGLKLLSDGLMCVEKVSTTI 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,080
Number of Sequences: 438
Number of extensions: 3738
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)