Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_K05
         (464 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   5.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   9.8  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    20   9.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   9.8  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = -3

Query: 105 GFQGXWRCRHEGQAEDEQPKPMHLSRKPRPNG 10
           G+ G  +     +   + P  MH++    PNG
Sbjct: 95  GYYGPQQQMDGQEYRPDSPSSMHMANTAAPNG 126


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 459 SATNLMVFSTVCESGPTYSNLSVS 388
           ++TN+ +   +C  G T   +S S
Sbjct: 272 ASTNIFLCDEICNEGQTILGISYS 295


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 459 SATNLMVFSTVCESGPTYSNLSVS 388
           ++TN+ +   +C  G T   +S S
Sbjct: 272 ASTNIFLCDEICNEGQTILGISYS 295


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 248 IDENEKHKYGVSYEIHPETDDGEDPIFKCNVLLGSEDNM 364
           +D+N ++  G    IHP   D E    + N+L  ++ NM
Sbjct: 279 LDKNPENTLGTMLSIHPSKLDVE----QMNLLHSNDLNM 313


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 60 DEQPKPMHLSRKPR 19
          DE+ +P   SRKP+
Sbjct: 44 DEEERPSFKSRKPK 57


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 144 PSGCQLVPATYKTTR 188
           P+GC +V  T+K  R
Sbjct: 83  PAGCTVVIGTFKVHR 97


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 57  EQPKPMHLSRKPRPNG 10
           + P  MH++    PNG
Sbjct: 113 DSPSSMHMANTAAPNG 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,980
Number of Sequences: 336
Number of extensions: 2023
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)