Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K04
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 299 5e-81
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 299 6e-81
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 299 8e-81
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 299 8e-81
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 299 8e-81
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 299 8e-81
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 297 3e-80
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 3e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 161 2e-39
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 103 5e-22
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 299 bits (735), Expect = 5e-81
Identities = 138/221 (62%), Positives = 164/221 (74%)
Frame = +3
Query: 63 FKIWASLKLCXTNNXSSRXQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSN 242
F+ +K+ R QVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N
Sbjct: 5 FRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTN 64
Query: 243 KDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXX 422
+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 65 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 124
Query: 423 XXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI 602
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS
Sbjct: 125 IYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHST 184
Query: 603 KRFPXYDAXSKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDS 725
KRFP YD+ SK+FNAEVHR HI G +VA+YM L ++DED+
Sbjct: 185 KRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 225
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 299 bits (734), Expect = 6e-81
Identities = 136/204 (66%), Positives = 159/204 (77%)
Frame = +3
Query: 114 RXQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R QVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 473
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 474 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEV 653
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+ SK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 654 HRAHIFGLHVAEYMXSLEQDDEDS 725
HR HI G +VA+YM L ++DED+
Sbjct: 195 HRKHIMGQNVADYMRCLMEEDEDA 218
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 299 bits (733), Expect = 8e-81
Identities = 136/204 (66%), Positives = 159/204 (77%)
Frame = +3
Query: 114 RXQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R QVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 473
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 474 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEV 653
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+ SK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 654 HRAHIFGLHVAEYMXSLEQDDEDS 725
HR HI G +VA+YM L ++DED+
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDA 218
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 299 bits (733), Expect = 8e-81
Identities = 136/204 (66%), Positives = 159/204 (77%)
Frame = +3
Query: 114 RXQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R QVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 473
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 474 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEV 653
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+ SK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 654 HRAHIFGLHVAEYMXSLEQDDEDS 725
HR HI G +VA+YM L ++DED+
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDA 218
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 299 bits (733), Expect = 8e-81
Identities = 136/204 (66%), Positives = 159/204 (77%)
Frame = +3
Query: 114 RXQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R QVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 473
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 474 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEV 653
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+ SK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 654 HRAHIFGLHVAEYMXSLEQDDEDS 725
HR HI G +VA+YM L ++DED+
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDA 218
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 299 bits (733), Expect = 8e-81
Identities = 136/204 (66%), Positives = 159/204 (77%)
Frame = +3
Query: 114 RXQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R QVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 473
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 474 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEV 653
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+ SK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 654 HRAHIFGLHVAEYMXSLEQDDEDS 725
HR HI G +VA+YM L ++DED+
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDA 218
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 297 bits (728), Expect = 3e-80
Identities = 135/204 (66%), Positives = 158/204 (77%)
Frame = +3
Query: 114 RXQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R QVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 473
VCA Y+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 474 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEV 653
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFP YD+ SK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 654 HRAHIFGLHVAEYMXSLEQDDEDS 725
HR HI G +VA+YM L ++DED+
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDA 218
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (407), Expect = 3e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +3
Query: 222 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 401
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 402 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 581
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 582 LNVPH 596
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 161 bits (392), Expect = 2e-39
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +3
Query: 114 RXQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R QVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 294 VCAAYSHELPRYGVKVGLTNYAAA 365
VCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 103 bits (248), Expect = 5e-22
Identities = 45/66 (68%), Positives = 56/66 (84%)
Frame = +3
Query: 528 TTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFGLHVAEYMXSLE 707
TTTG +VFGA+KGAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI G +VA+YM L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 708 QDDEDS 725
++DED+
Sbjct: 61 EEDEDA 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,293,709
Number of Sequences: 237096
Number of extensions: 1983612
Number of successful extensions: 3779
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3770
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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