Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_K02
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    26   0.29 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   3.5  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   6.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 17/63 (26%), Positives = 24/63 (38%)
 Frame = +2

Query: 566 TCESIYTTYLCESRGDEVGCNCLSGYLRNSSGICIPSEECFQXQQCGVNGTYSDCGFRCP 745
           TC     +Y+C  +    G NC     +N   +C  S  C     C  + T+  C   CP
Sbjct: 37  TCIDGINSYICTCKPGFTGSNC-----QNRINLC-DSSPCLNGATCQDHTTHYTC--HCP 88

Query: 746 NXY 754
             Y
Sbjct: 89  YGY 91



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 596 CESRGDEVGCNCLSGY 643
           CE  G+   C+C  GY
Sbjct: 161 CEDIGNSHRCHCSDGY 176


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 209  CKPNYKLLSQDDERCVLTTDCPP-VNCTRPNEVWSPSPP 322
            C  ++ LL   +    L  D P   +CT+P E  +P+PP
Sbjct: 977  CGGSFPLLRSLNRGLGLIPDNPSREDCTKPPEPVTPAPP 1015


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 134 DYCPTSDSRAV 166
           DYCPTS+S +V
Sbjct: 669 DYCPTSNSGSV 679


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/37 (24%), Positives = 14/37 (37%)
 Frame = +2

Query: 5   FAKMLFVCVSVLVFICSSTAHNTTEGPCNANETLVSC 115
           FAK+  +C    +       HN     C + +  V C
Sbjct: 62  FAKLDSICEDCYMLFREPQLHNLCRSECFSTKYFVGC 98


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 547 FGIRQYFVITTFRY 506
           FG+  YF I+TF Y
Sbjct: 235 FGVSFYFFISTFFY 248


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 20  FVCVSVLVFICSSTAHNTTE-GP 85
           F C+++L  IC+   H T + GP
Sbjct: 320 FYCMTLLYIICNEGHHATRKMGP 342


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 20  FVCVSVLVFICSSTAHNTTE-GP 85
           F C+++L  IC+   H T + GP
Sbjct: 320 FYCMTLLYIICNEGHHATRKMGP 342


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 547 FGIRQYFVITTFRY 506
           FG+  YF I+TF Y
Sbjct: 231 FGVSFYFFISTFFY 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,721
Number of Sequences: 336
Number of extensions: 4610
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)