Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_K02
(763 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0054 - 773395-774518,776957-777124,777455-778376 34 0.11
02_03_0246 - 16807619-16808145,16808208-16808868 33 0.33
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 32 0.43
08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544 31 1.3
01_05_0486 - 22637391-22637723,22638016-22638180,22638254-22638622 30 2.3
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 29 3.1
11_08_0004 + 27518384-27519018,27519147-27519397,27520437-275205... 29 3.1
07_03_0866 - 22134215-22135351 29 3.1
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 29 4.0
06_03_1473 - 30382528-30382731,30382814-30382930,30383048-303831... 29 4.0
11_04_0014 - 12253341-12253358,12253520-12253729,12254388-122545... 29 5.3
08_02_0266 + 15051868-15052286,15052376-15052475,15053540-150535... 29 5.3
04_03_1017 + 21747044-21748051 29 5.3
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 29 5.3
02_04_0413 + 22681957-22682035,22682253-22682788 29 5.3
05_01_0482 + 4016784-4017323 28 7.1
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 28 9.3
02_01_0069 + 491452-492594 28 9.3
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 9.3
>10_01_0054 - 773395-774518,776957-777124,777455-778376
Length = 737
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = +2
Query: 500 RDIPECGYNEVLSDSKIVCPPQTCESIYTTYLCESRGDEVGCNCLSGYLRNSSGICIPSE 679
RD+ C EV + K + C S+ +T + + G CNC SGY N P++
Sbjct: 246 RDVASCPAPEVETSKKNMPAGYACVSVNSTCVNSTNGLGYYCNCSSGYEGNPYD-DDPNK 304
Query: 680 ECFQXQQCGVNGTYSDCGFRCPN 748
C +C Y C C N
Sbjct: 305 GCKDIDECAHPNKY-PCHGVCRN 326
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = +2
Query: 155 SRAVVACSPPYPCNPGCVCKPNYKLLSQDDERCVLTTDCPPVNCTRPNEVWSPSPPPCLQ 334
SR C +PC P C C + S C TT PP P +P PP
Sbjct: 105 SRMAARC---WPCRPPCCCGRRRRAASPSASPC--TT--PPATARAPRTSSTPGPPSAQA 157
Query: 335 ETCDDVDVTPVPCNEFI 385
+D T +P E I
Sbjct: 158 PPPPVIDRTSIPEREDI 174
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 32.3 bits (70), Expect = 0.43
Identities = 25/81 (30%), Positives = 29/81 (35%)
Frame = +2
Query: 83 PCNANETLVSCKAGCPTDYCPTSDSRAVVACSPPYPCNPGCVCKPNYKLLSQDDERCVLT 262
P A+E S AG P P V A +PP P P P + Q D L
Sbjct: 187 PPPADEDGTSASAGAPPPQAPLPPPAPVPAPAPPPP--PAAAPAPAAQ-PEQRDRDAALD 243
Query: 263 TDCPPVNCTRPNEVWSPSPPP 325
P P V +P PPP
Sbjct: 244 QFATPAPAPAPPPVTAPPPPP 264
>08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544
Length = 447
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +2
Query: 518 GYNEVLSDSKIVCPPQTCESIYTTYLCESRGDEVGCNCLSGYLRNS--SGICIPSEEC 685
G + S+ P C S ++ + S G CNC +GY N G C EC
Sbjct: 315 GSGSCAAASRTPLPSYACRSAHSVCIDSSNGPGYICNCTAGYHGNPYVVGDCTDINEC 372
>01_05_0486 - 22637391-22637723,22638016-22638180,22638254-22638622
Length = 288
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +2
Query: 305 WSPSPPPCLQETC---DDVDVTPVPCNEFIQSSPRCICKDN 418
W+P P C + C DDVD EF+Q R +C+ +
Sbjct: 236 WTPRRPRCRRCCCAASDDVDAALRALVEFLQEKKRAMCRSH 276
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +2
Query: 446 VSAQECRDINERTKNREKRDIPECGYNEVLSDSKIVCPPQTCESIYTTYLCESRGDEVGC 625
V+ + C+ RT +R + + S S P C S ++ + + G C
Sbjct: 214 VAEKHCKSFVNRTGDRSVPTVLDWAIRGNGSCSSATGAP-ACVSAHSYCVNATNGKGYLC 272
Query: 626 NCLSGYLRNS--SGICIPSEEC 685
NC +GY N +G CI EC
Sbjct: 273 NCSAGYSGNPYVTGGCININEC 294
>11_08_0004 +
27518384-27519018,27519147-27519397,27520437-27520559,
27523499-27524529
Length = 679
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 569 CESIYTTYLCESRGDEVGCNCLSGYLRNS--SGICIPSEEC 685
C S ++ + + GD CNC +GY N +G CI EC
Sbjct: 260 CVSAHSYCVNATNGDGYLCNCSTGYAGNPYVTGGCININEC 300
>07_03_0866 - 22134215-22135351
Length = 378
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +2
Query: 182 PYPCNPGCVCKPNYKLLSQDDERCVLTTDCPPVNCTRPNEVWSPSPPPCLQETCDDVDVT 361
P P G K + ++ +D+ VL+ PP + W PPP + + V V
Sbjct: 229 PSPGPGGARPKVDTEMAHVEDDAPVLSRGTPPAPYVTESAPWPAPPPPYMTQQVYYVPVR 288
Query: 362 PV 367
PV
Sbjct: 289 PV 290
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 104 LVSCKAGCPTDYCPTSDSRAVVACSPPYPCNPGCVCKPNYKLLSQDDERCVLTTD 268
L SC G T C T+D V C NPG + +L Q DE +L+ D
Sbjct: 31 LGSCDQGWTTLQCDTNDRETVRLC----VLNPGLAVACHLELELQKDENVLLSVD 81
>06_03_1473 -
30382528-30382731,30382814-30382930,30383048-30383129,
30383211-30383278,30383444-30383545,30383994-30384122,
30384561-30384623,30384781-30384897,30385210-30386116,
30386225-30386494,30386929-30386998,30387114-30387273
Length = 762
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 467 DINERTKNREKRDIPECGYNEVLSDSKIVCPPQTCESIY 583
D++ T +PE +N + K++ PP+TC + Y
Sbjct: 660 DVDHFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYY 698
>11_04_0014 -
12253341-12253358,12253520-12253729,12254388-12254523,
12254631-12254752,12254789-12254842,12254872-12255161,
12255737-12255948,12256008-12256475,12256560-12256856,
12257467-12258329,12258417-12258490,12258616-12258650,
12259024-12259087,12259452-12259733,12259870-12259946,
12260045-12260325
Length = 1160
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Frame = +2
Query: 107 VSCKAGCPTDYCPTSDSRAVVACSPPYPCNPGC----------VCKPNY-KLLSQDDERC 253
+ C+A CP +CP + C P P C +C P Y + S RC
Sbjct: 194 LDCQACCPGFFCPHG-----LTCMIPCPLGAYCPLSSLNKTTGICDPFYCRKGSTSQTRC 248
Query: 254 VLTTDCPPVNCTR 292
+ CPP + T+
Sbjct: 249 YKKSSCPPNSATQ 261
>08_02_0266 +
15051868-15052286,15052376-15052475,15053540-15053581,
15053734-15053930,15055412-15055508,15055604-15055699,
15056395-15056633,15056728-15056811,15056898-15057185,
15057658-15057718,15061093-15061362,15061663-15061722
Length = 650
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 410 KDNYFRNDSGICVSAQECRDINERTKNRE-KRDIPECGYNEVLSDSKIVCPPQTCE 574
K + + +G C+++ + R N+ K+R K DIPE +V + + + CE
Sbjct: 559 KPTHISSQAGTCIASCQTRMNNKEHKSRRNKEDIPEMRSEKVATPKVSIKRKRKCE 614
>04_03_1017 + 21747044-21748051
Length = 335
Score = 28.7 bits (61), Expect = 5.3
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 116 KAGCPTDYCPTSDSRAVVACSPPY-PCNPGCVCKPNYKLLSQDDERCVLTTDCPPVNCTR 292
+A P DY P S SR A SP Y P +P P + S D + PP
Sbjct: 156 RAASP-DYTPASPSRRAAASSPDYTPESP-----PRRRAASPD-----YSPSTPPRRAAS 204
Query: 293 PNEVWSPSPPPCLQETCDDVDVTP 364
P+ +SPS PP + D TP
Sbjct: 205 PD--YSPSTPPRRAASPDYSPSTP 226
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 615 KSDVTVYLDI*GTAVVYAFPVRNVFXNNNA 704
+SDV+ YLD G+ V++A R+ F N A
Sbjct: 71 RSDVSEYLDFRGSTVLHAVAGRDFFLENTA 100
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 28.7 bits (61), Expect = 5.3
Identities = 29/95 (30%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Frame = +2
Query: 122 GCPTDYCPTSDSRAVVACSPPYP-CNPGCVCKPNYKLLSQDDERCVLTTDCPPVNCTRPN 298
GC CP S S C +P C PGC C +CPP T P
Sbjct: 123 GCGGGQCPPSPS-----CENHHPPCKPGCCCCGCSGGECPPPPSPPCQHECPP---TPPC 174
Query: 299 EVWSPSPPPCLQETCDDVDVTPV--PCNEFIQSSP 397
E PPC + C D C E+ QS P
Sbjct: 175 E-----HPPCSESGCCDKGCNSCCNRCGEYGQSRP 204
>05_01_0482 + 4016784-4017323
Length = 179
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 580 YALTSLRGTHYFGIRQYFVITTFRYVTLLAILRTLIYVATFLSGNA 443
+A T+L GIR Y + T + LA+L TL+ V L+ ++
Sbjct: 58 HAATTLTEGQMRGIRWYIMFNTVTFTIALALLITLVAVGRSLASHS 103
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/78 (25%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Frame = +2
Query: 179 PPYPCNPGCVCKPNYKLLSQDDERCVLTTDCP---PVNCTRPNEVWSPSPPPCLQETCDD 349
PP PC P KP + C P P +C +P P PC +
Sbjct: 85 PPPPCKPPPCEKPPEDCKPKPCHCCSCEKPKPKPKPCHCEKPKPCHCEKPKPCEKPPPCK 144
Query: 350 VDVTPVPCNEFIQSSPRC 403
+ P P E P C
Sbjct: 145 PEEPPKPPPEKPPPKPEC 162
>02_01_0069 + 491452-492594
Length = 380
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 128 PTDYCPTSDSRAVVACSPPYPCNPGCVCKPNYKLLSQDDE 247
P + DS V P+ NPGC Y LL DD+
Sbjct: 117 PISFTTAGDSCLYVIERVPFSGNPGCFEALTYGLLPDDDD 156
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 1/112 (0%)
Frame = +2
Query: 53 SSTAHNTTEGPCNANETLVSCKAGCPTDYCPTSDSRAVVACSPPYPCNPGCV-CKPNYKL 229
S T+ +T G C+++ T +D PT+ +P +P Y
Sbjct: 472 SGTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGYYPPTPSIGTSPSTPGTGGGYYP 531
Query: 230 LSQDDERCVLTTDCPPVNCTRPNEVWSPSPPPCLQETCDDVDVTPVPCNEFI 385
S T D P + P P+PP D + P PC+ ++
Sbjct: 532 PSPSTGGYTPTPDVPISTPSSPYSPLVPTPPSSTTPMPFDPNTAPFPCSYWL 583
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,585,234
Number of Sequences: 37544
Number of extensions: 520905
Number of successful extensions: 1696
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1692
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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