Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_J19
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 86 2e-17
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 0.002
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 38 0.005
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.005
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.005
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.006
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 38 0.006
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 38 0.006
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 38 0.006
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 38 0.008
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 37 0.011
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 37 0.011
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 37 0.011
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 36 0.025
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 36 0.025
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 36 0.025
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 36 0.033
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 35 0.057
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 35 0.057
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 35 0.057
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 35 0.057
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 34 0.100
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 33 0.13
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.17
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.17
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 33 0.23
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 33 0.23
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 33 0.23
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 33 0.23
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 32 0.30
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 31 0.53
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 31 0.53
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 31 0.53
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 31 0.70
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 31 0.70
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.70
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 31 0.93
AF068708-3|AAC17754.1| 253|Caenorhabditis elegans Histone h1 li... 31 0.93
AF026521-1|AAB82588.1| 253|Caenorhabditis elegans histone H1.4 ... 31 0.93
AF005371-1|AAB81029.1| 253|Caenorhabditis elegans histone H1.4 ... 31 0.93
AC024875-4|AAK29990.1| 143|Caenorhabditis elegans U2af splicing... 31 0.93
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 31 0.93
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 31 0.93
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 31 0.93
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 31 0.93
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 30 1.6
Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical p... 29 2.1
Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical pr... 29 2.1
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 2.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 2.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 2.1
Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical p... 29 2.8
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 29 2.8
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.8
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 2.8
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 2.8
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 2.8
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.8
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 29 2.8
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 29 2.8
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 29 2.8
Z82060-3|CAB04883.1| 206|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC024876-6|AAS80337.1| 181|Caenorhabditis elegans Hypothetical ... 29 3.8
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 28 5.0
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z47356-4|CAA87417.1| 431|Caenorhabditis elegans Hypothetical pr... 28 5.0
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 28 5.0
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical... 28 6.6
Z75546-6|CAA99894.1| 155|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 27 8.7
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 27 8.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 27 8.7
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 27 8.7
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 85.8 bits (203), Expect = 2e-17
Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Frame = +1
Query: 226 GRSRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIK--EKQXXX 399
GRSR + SP P R D DR SP ++ S P D+ ++
Sbjct: 62 GRSRSPIRRGSP---PRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRA 118
Query: 400 XXXXXXXXXXXXXXTRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYA 579
R+ I L+ NV + H+ EIFS YG +K+++ P DR H H RGY
Sbjct: 119 SPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYG 178
Query: 580 YVEFNNADEAXNAMKHMDGGQI 645
YVE++N ++A ++KHMDGGQI
Sbjct: 179 YVEYDNLEDAEKSIKHMDGGQI 200
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ +G ++ +V+ D I IFS G V SI+ DR +GY ++EF + A A+++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDR-ETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 628 MDGGQI 645
++G ++
Sbjct: 79 LNGYEL 84
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNA 618
T++ + L + + +F T+G VK+I P RG+ +V+F +ADEA A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+++G T +VT + F +G V +I PMD RG+ +VEF+ A++A A+ +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMD-YESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 628 MDGGQI 645
M+ ++
Sbjct: 72 MNESEL 77
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+++G T + + FS+ G + ++ DR RG+A++EF A A++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDR-ETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 628 MDGGQ 642
M+G +
Sbjct: 66 MNGAE 70
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 478 TRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
T D +H+ FS YG +K+I +DR +GYA VE+ EA A+
Sbjct: 67 TEDDVHDKFSEYGKIKNIHLNLDR-RTGFLKGYALVEYETQKEANEAI 113
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
++++G L +V + +IF YG +K ++ R G +A+VEF + +A +A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR-----GPAFAFVEFEDHRDAEDAVR 64
Query: 625 HMDG 636
DG
Sbjct: 65 ARDG 68
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
++++G L +V + +IF YG +K ++ R G +A+VEF + +A +A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR-----GPAFAFVEFEDHRDAEDAVR 64
Query: 625 HMDG 636
DG
Sbjct: 65 ARDG 68
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+++G + T + I + F G+V + DR H +G+AYVEF + NA+
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHP-KGFAYVEFTEKEGMQNALAM 138
Query: 628 MD 633
D
Sbjct: 139 TD 140
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/67 (26%), Positives = 40/67 (59%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +A +A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 625 HMDGGQI 645
+DG +I
Sbjct: 58 ALDGSRI 64
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/67 (26%), Positives = 40/67 (59%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +A +A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 625 HMDGGQI 645
+DG +I
Sbjct: 58 ALDGSRI 64
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/67 (26%), Positives = 40/67 (59%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +A +A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 625 HMDGGQI 645
+DG +I
Sbjct: 58 ALDGSRI 64
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 229 RSRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLP 354
RSR +++T S ++SP RD K R RS + + +S P
Sbjct: 139 RSRERERTRSRSRSP--QERDRSHSKSRSRSRSRSRSRSASP 178
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
I + L N T IHE F+ T++ ++F P+ G AYVEF N +EA AM++
Sbjct: 66 IRLRGLPFNATEKDIHEFFAGL-TIERVKFVCTTGRPN---GEAYVEFKNTEEAGKAMEN 121
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
T + I L+ T + + F YG + + P D+ + +G+ +V F +A +A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDK-YSRQSKGFGFVRFYERRDAEHAL 77
Query: 622 KHMDG 636
DG
Sbjct: 78 DRTDG 82
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
T + I L+ T + + F YG + + P D+ + +G+ +V F +A +A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDK-YSRQSKGFGFVRFYERRDAEHAL 77
Query: 622 KHMDG 636
DG
Sbjct: 78 DRTDG 82
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ +GR+ + + F YG +K + D RGYA++E+++ E A K
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHD--EAGKPRGYAFIEYSDKAEMHTAYKK 163
Query: 628 MDG 636
DG
Sbjct: 164 ADG 166
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+++G T D + FS G V ++ DR RG+A+VEF A A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDR-ETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 628 MDG 636
+G
Sbjct: 65 FNG 67
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ +G L+ +V+ + + F+ +G V + D + +GY +V F N A NA+
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRD-VQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 628 MDG 636
M+G
Sbjct: 196 MNG 198
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/68 (22%), Positives = 33/68 (48%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
T +++G ++ T + ++FSTYG + + + YA+V + + A A+
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRI-------FKTQRYAFVRYEKKECATKAI 289
Query: 622 KHMDGGQI 645
M+G ++
Sbjct: 290 MEMNGKEM 297
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
T + + L + I +IF ++G ++ I+ +D RG+A + F NAD+A +
Sbjct: 127 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS--NRENRGFATITFRNADDAQKSC 184
Query: 622 KHMDGGQI 645
+ ++ ++
Sbjct: 185 EQLNNFEL 192
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
T + + L + I +IF ++G ++ I+ +D RG+A + F NAD+A +
Sbjct: 272 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS--NRENRGFATITFRNADDAQKSC 329
Query: 622 KHMDGGQI 645
+ ++ ++
Sbjct: 330 EQLNNFEL 337
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+++G + T + I F+ G V ++ DR RG+A+VEF+ A A++
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDR-ETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 628 MDG 636
++G
Sbjct: 67 LNG 69
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +A +A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 625 HMDGGQI 645
++G ++
Sbjct: 55 DLNGKEL 61
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +A +A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 625 HMDGGQI 645
++G ++
Sbjct: 55 DLNGKEL 61
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +A +A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 625 HMDGGQI 645
++G ++
Sbjct: 55 DLNGKEL 61
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 229 RSRPKKKTISPNKSPLK-DRRDA-DREKIRDRSPTGDKKKSVLPLSNDK 369
RSR ++ S ++SP K RR++ + + R RS + D +KS P + K
Sbjct: 227 RSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSADNRKSRSPSRSPK 275
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
T ++I L N D + E+ S YG + S + MD+ +N +GY +V+F + A A+
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKA-TNNCKGYGFVDFESPQAAAAAV 165
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
T ++I L N D + E+ S YG + S + MD+ +N +GY +V+F + A A+
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKA-TNNCKGYGFVDFESPQAAAAAV 139
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 34.7 bits (76), Expect = 0.057
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAXNA 618
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 128 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 178
Query: 619 MKHMD----GGQI 645
+ M+ GGQ+
Sbjct: 179 IVQMNNQDVGGQL 191
Score = 33.9 bits (74), Expect = 0.100
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ +G L+ V + E F +G V + D + +GY +V + +EA A++
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 628 MDG 636
M+G
Sbjct: 83 MNG 85
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 34.7 bits (76), Expect = 0.057
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAXNA 618
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 138 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 188
Query: 619 MKHMD----GGQI 645
+ M+ GGQ+
Sbjct: 189 IVQMNNQDVGGQL 201
Score = 33.9 bits (74), Expect = 0.100
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ +G L+ V + E F +G V + D + +GY +V + +EA A++
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 628 MDG 636
M+G
Sbjct: 93 MNG 95
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 34.7 bits (76), Expect = 0.057
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAXNA 618
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 241 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 291
Query: 619 MKHMD----GGQI 645
+ M+ GGQ+
Sbjct: 292 IVQMNNQDVGGQL 304
Score = 33.9 bits (74), Expect = 0.100
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ +G L+ V + E F +G V + D + +GY +V + +EA A++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 628 MDG 636
M+G
Sbjct: 196 MNG 198
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+++G L VT D I +F+ G+V + D + YA+VEF++ +A A++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDG----SNDPYAFVEFSDHGQASQALQT 103
Query: 628 MD 633
M+
Sbjct: 104 MN 105
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.057
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +1
Query: 442 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAXNA 618
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 209 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 259
Query: 619 MKHMD----GGQI 645
+ M+ GGQ+
Sbjct: 260 IVQMNNQDVGGQL 272
Score = 33.9 bits (74), Expect = 0.100
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ +G L+ V + E F +G V + D + +GY +V + +EA A++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 628 MDG 636
M+G
Sbjct: 164 MNG 166
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 33.9 bits (74), Expect = 0.100
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
+ IG + N T + I E F G + P D+ + +AY+EF+++ NA+
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQ-KNFAYIEFDDSSSIENAL 113
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ +G L + + E F +G V + D + + G+GY +V + ++A A+
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDN-NTNKGKGYGFVSYPRREDAERAIDE 192
Query: 628 MDG 636
M+G
Sbjct: 193 MNG 195
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ + +L T + + IFS +G + + E DR + YA++EF+NA A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 301
Query: 628 MD 633
MD
Sbjct: 302 MD 303
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ + +L T + + IFS +G + + E DR + YA++EF+NA A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 301
Query: 628 MD 633
MD
Sbjct: 302 MD 303
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ + +L T + + IFS +G + + E DR + YA++EF+NA A
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 232
Query: 628 MD 633
MD
Sbjct: 233 MD 234
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+++G L+ D ++E+F G V+ + +DR G+ +VE+ ++A A+++
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRF-KKTPCGFCFVEYYTREDAELALQN 97
Query: 628 M 630
+
Sbjct: 98 I 98
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
I +G L V +++ FS +G + + M + +G+A++ F + + + A++
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 628 MDG 636
M+G
Sbjct: 162 MNG 164
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
I +G L V +++ FS +G + + M + +G+A++ F + + + A++
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 628 MDG 636
M+G
Sbjct: 172 MNG 174
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 628 MDGGQI 645
+ G QI
Sbjct: 285 LQGFQI 290
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 628 MDGGQI 645
+ G QI
Sbjct: 285 LQGFQI 290
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 628 MDGGQI 645
+ G QI
Sbjct: 285 LQGFQI 290
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 628 MDGGQI 645
+ G QI
Sbjct: 285 LQGFQI 290
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
+ IG + N T + + E F G + P D+ + +AY+EF+++ NA+
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQ-KNFAYIEFDDSSSIENAL 119
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 229 RSRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 387
RSR ++ SP+ +D RD DR++ RDR + D++ D+ + + +
Sbjct: 274 RSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDRKRSR 326
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE 534
+H+ ++ + TRDHI+ +F+ G ++ ++
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLK 40
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 229 RSRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 387
RSR ++ SP+ +D RD DR++ RDR + D++ D+ + + +
Sbjct: 274 RSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDRKRSR 326
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE 534
+H+ ++ + TRDHI+ +F+ G ++ ++
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLK 40
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 496 EIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKHMDG 636
++FS +G + +++ D +GYA+V +N EA NAM ++G
Sbjct: 392 QLFSQFGAIVNVKILRDLTQ--QCKGYAFVSMSNYTEAYNAMLSLNG 436
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 PKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDK 369
P KKT P K P +D + E + P GDKKK V N++
Sbjct: 550 PPKKTAPPKKQP-EDEEVVEEEDEPLKPPPGDKKKKVPVKENEE 592
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 445 RIHIGRLTLNV-TRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 621
R+ IG + + TRD I E+F +G + ++ + +G+ +V+FN A A +
Sbjct: 84 RVFIGNIARAIITRDDIIELFRPFGKIIAVNY-------FAQQGFGFVQFNEAGSADESC 136
Query: 622 KHMDG 636
+ ++G
Sbjct: 137 RSLNG 141
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 PKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDK 369
P KKT P K P +D + E + P GDKKK V N++
Sbjct: 550 PPKKTAPPKKQP-EDEEVVEEEDEPLKPPPGDKKKKVPVKENEE 592
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 264 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 317
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 264 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 317
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 484 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 636
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 422 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 473
>AF068708-3|AAC17754.1| 253|Caenorhabditis elegans Histone h1 like
protein 4 protein.
Length = 253
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 223 NGRSRPKKKTISPNKSPLKDRRDADREK-----IRDRSPTGDKK 339
NGR R +KT S KSP ++DA EK + ++ TG+KK
Sbjct: 120 NGRFRLAEKTASVAKSPAAAKKDATGEKKATTTVAKKAATGEKK 163
>AF026521-1|AAB82588.1| 253|Caenorhabditis elegans histone H1.4
protein.
Length = 253
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 223 NGRSRPKKKTISPNKSPLKDRRDADREK-----IRDRSPTGDKK 339
NGR R +KT S KSP ++DA EK + ++ TG+KK
Sbjct: 120 NGRFRLAEKTASVAKSPAAAKKDATGEKKATTTVAKKAATGEKK 163
>AF005371-1|AAB81029.1| 253|Caenorhabditis elegans histone H1.4
protein.
Length = 253
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 223 NGRSRPKKKTISPNKSPLKDRRDADREK-----IRDRSPTGDKK 339
NGR R +KT S KSP ++DA EK + ++ TG+KK
Sbjct: 120 NGRFRLAEKTASVAKSPAAAKKDATGEKKATTTVAKKAATGEKK 163
>AC024875-4|AAK29990.1| 143|Caenorhabditis elegans U2af splicing
factor protein 1,isoform b protein.
Length = 143
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 484 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 636
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 69 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 120
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 484 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 636
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 422 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 473
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 484 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 636
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 397 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 448
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 484 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 636
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 400 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 451
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
R+ G L V+ + + + F Y + + + + + +GY +V F ++++ AM+
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRES-RTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 625 HMDG 636
MDG
Sbjct: 263 EMDG 266
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
++I + VT + ++E+F Y ++ ++ D YA++ FN D+ AM+
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKD---------YAFIHFNERDDCLKAMEE 429
Query: 628 MDGGQI 645
+G ++
Sbjct: 430 WNGKEL 435
>Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE 534
+H+ ++ + TRDHI+ +F+ G ++ ++
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLK 40
>Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE 534
+H+ ++ + TRDHI+ +F+ G ++ ++
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLK 40
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +1
Query: 220 NNGRSRPKKKTIS--PNKSPLKDRRDADREKIRDRSP 324
+ SRP +K IS P+++ K+++ D+E+ R RSP
Sbjct: 124 SKAESRPLRKRISPPPSENREKEKQSRDKERRRSRSP 160
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 235 RPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 387
R + ++ S ++ KDR+ DR + RDR + +S P D+ + + +
Sbjct: 64 RKRDRSRSRDRDRKKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRR 114
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 262 NKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEKQ 390
NKSP + +DR++ R RS D+KK + + +E++
Sbjct: 52 NKSPSRSESVSDRKRDRSRSRDRDRKKDRKKKDRSRERDRERR 94
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 235 RPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 387
R + ++ S ++ KDR+ DR + RDR + +S P D+ + + +
Sbjct: 64 RKRDRSRSRDRDRKKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRR 114
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 262 NKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEKQ 390
NKSP + +DR++ R RS D+KK + + +E++
Sbjct: 52 NKSPSRSESVSDRKRDRSRSRDRDRKKDRKKKDRSRERDRERR 94
>Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.10 protein.
Length = 151
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 223 NGRSRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKS 345
+ RSR + ++ S +S K R R + R RS T KK++
Sbjct: 70 SSRSRSRSRSKSTRRSRSKSTRSRSRSRSRSRSSTRGKKRA 110
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Frame = +1
Query: 235 RPKKKTISPNKSPLKDRRDADREKIRDRSPT--GDKKKSVLPLSNDKAKIKEKQXXXXXX 408
+PK++ P K +++ + +P G++KK + + K+++
Sbjct: 73 KPKRRKYDPKKKAEEEKAADAAAAAEEVAPETEGEEKKDENK-EGKRDRTKQRENRTLQK 131
Query: 409 XXXXXXXXXXXTRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHN 564
+ +G + L + + IFS +GT+ S+ M L P N
Sbjct: 132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVR--MRNLLPAN 181
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 232 SRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEKQ 390
S P KK SP+ SP K D +EK +SPT K+KS + K+ +K+++
Sbjct: 1438 SSPTKKEKSPS-SPTKKTGDEVKEKSPPKSPT-KKEKSPEKPEDVKSPVKKEK 1488
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
R+++G++ N + YG + +I G+A+V+F ++ +A +A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 625 HMDG 636
+DG
Sbjct: 54 DLDG 57
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
R+++G++ N + YG + +I G+A+V+F ++ +A +A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 625 HMDG 636
+DG
Sbjct: 54 DLDG 57
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
R+++G++ N + YG + +I G+A+V+F ++ +A +A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 625 HMDG 636
+DG
Sbjct: 54 DLDG 57
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 232 SRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEKQ 390
S P KK SP+ SP K D +EK +SPT K+KS + K+ +K+++
Sbjct: 1438 SSPTKKEKSPS-SPTKKTGDEVKEKSPPKSPT-KKEKSPEKPEDVKSPVKKEK 1488
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 232 SRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEKQ 390
S P KK SP+ SP K D +EK +SPT K+KS + K+ +K+++
Sbjct: 1438 SSPTKKEKSPS-SPTKKTGDEVKEKSPPKSPT-KKEKSPEKPEDVKSPVKKEK 1488
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 232 SRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEKQ 390
S P KK SP+ SP K D +EK +SPT K+KS + K+ +K+++
Sbjct: 1438 SSPTKKEKSPS-SPTKKTGDEVKEKSPPKSPT-KKEKSPEKPEDVKSPVKKEK 1488
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 2 GSXSIAFACSCVKRSSNPKQASKSKVPQAPAA 97
G +I C K++ PK ASK P APA+
Sbjct: 16 GPLAILIGCGGKKKAPPPKSASKMTAPPAPAS 47
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNN---ADEAX 612
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 613 NAMKHMD-GGQ 642
M D GGQ
Sbjct: 266 AGMNMFDLGGQ 276
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNN---ADEAX 612
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 613 NAMKHMD-GGQ 642
M D GGQ
Sbjct: 266 AGMNMFDLGGQ 276
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNN---ADEAX 612
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 613 NAMKHMD-GGQ 642
M D GGQ
Sbjct: 266 AGMNMFDLGGQ 276
>Z82060-3|CAB04883.1| 206|Caenorhabditis elegans Hypothetical
protein T27F6.4 protein.
Length = 206
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 308 LEIDHQQETKKNLCYLYQMTKLKLRKN--RNDLQDVRSENAHHHHDQL 445
LE+ + ++KN+ +T LK RK + L V S + HHHH L
Sbjct: 80 LELKKKDRSEKNV-----VTNLKYRKPTANHHLDSVHSSSEHHHHHHL 122
>AC024876-6|AAS80337.1| 181|Caenorhabditis elegans Hypothetical
protein Y94H6A.10 protein.
Length = 181
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 223 NGRSRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKK 342
N K ++ S +KSPLKD D+ R IR + T +K+
Sbjct: 21 NLHDEKKPESSSKSKSPLKDGPDSQRSNIRRKLTTQMQKQ 60
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 389 RNDLQDVRSENAHHHHDQLVSTL 457
+N +Q + + AHHHH QLV +
Sbjct: 126 QNLVQQQQQQQAHHHHQQLVGEM 148
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 389 RNDLQDVRSENAHHHHDQLVSTL 457
+N +Q + + AHHHH QLV +
Sbjct: 126 QNLVQQQQQQQAHHHHQQLVGEM 148
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 389 RNDLQDVRSENAHHHHDQLVSTL 457
+N +Q + + AHHHH QLV +
Sbjct: 159 QNLVQQQQQQQAHHHHQQLVGEM 181
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 229 RSRPKKKTISPNKSPLKDRRDADREK 306
RSRPK++ ++P+K K++R AD E+
Sbjct: 1032 RSRPKREQVTPSKKSKKEKR-ADSEE 1056
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 229 RSRPKKKTISPNKSPLKDRRDADREK 306
RSRPK++ ++P+K K++R AD E+
Sbjct: 1032 RSRPKREQVTPSKKSKKEKR-ADSEE 1056
>Z47356-4|CAA87417.1| 431|Caenorhabditis elegans Hypothetical
protein T15H9.4 protein.
Length = 431
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +1
Query: 232 SRPKKKTI---SPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 387
S PKK++I S + D EKI P D K P+S A IK+K
Sbjct: 375 STPKKRSIFRQQDRNSAINFAEQPDHEKITSDIPEEDDLKKCEPMSGIAAYIKKK 429
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
I+IG L+ ++ + +FS YG V +I D+ +G+A++ + + A+ +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDK-DTGKSKGFAFLCYKDQRSTILAVDN 98
Query: 628 MDG 636
+G
Sbjct: 99 FNG 101
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 389 RNDLQDVRSENAHHHHDQLVSTL 457
+N +Q + + AHHHH QLV +
Sbjct: 159 QNLVQQQQQQQAHHHHQQLVGEM 181
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 448 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 627
+ I R+ + F +G V I +R N +G+AYV F+N A A +
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNR-RTGNHKGWAYVGFDNKAVAEIAAES 92
Query: 628 MDG 636
M+G
Sbjct: 93 MNG 95
>AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical
protein Y46G5A.15 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 323 QQETKKNLCYLYQMTKLKLRKNRNDLQDVRSENAHHHH 436
Q+ET+++L L Q+ + RK+R+ + + N++ HH
Sbjct: 16 QEETRRDLERLAQLNQSTSRKSRDRYRRSPNRNSNRHH 53
>Z75546-6|CAA99894.1| 155|Caenorhabditis elegans Hypothetical
protein R05D11.7 protein.
Length = 155
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 223 NGRSR-PKKKTISPNKSPLKDRRDADREK-IRDRSPTGDKKKSVLPLSN 363
+ RSR P+ K +S +DR++ DRE+ +DR P +K+ + L +
Sbjct: 46 SSRSRSPRDKRDRRERSRSRDRKERDRERQKKDREPKKREKQEEISLES 94
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 454 IGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKHMD 633
+ L + D + ++F G V I D++ +G+A+V F + D+A A+ ++
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKV-TGLPKGFAFVTFESRDDAARAIAELN 238
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
R+ +G L V + E+FS +G + +G+G+A++ + A +A +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL--------SGKGFAFLRLDTRAHAESAKE 168
Query: 625 HMDG 636
+DG
Sbjct: 169 AIDG 172
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +1
Query: 445 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 624
R+ +G L V + E+FS +G + +G+G+A++ + A +A +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL--------SGKGFAFLRLDTRAHAESAKE 168
Query: 625 HMDG 636
+DG
Sbjct: 169 AIDG 172
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 229 RSRPKKKTISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSN 363
RSR + ++S +DRRD + ++ RDR+ D ++ V +++
Sbjct: 113 RSRDRDGGRRRDRSRSRDRRDRNDDRKRDRNEDSDNEEDVSKMAD 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,911,613
Number of Sequences: 27780
Number of extensions: 202954
Number of successful extensions: 780
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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