Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_J16
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 309 1e-84
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 206 8e-54
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 140 1e-33
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 140 1e-33
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 138 4e-33
Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.19
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 1.00
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 1.00
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 1.3
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 1.7
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical... 28 7.0
AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81139-3|CAB03482.1| 520|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 309 bits (759), Expect = 1e-84
Identities = 148/183 (80%), Positives = 168/183 (91%)
Frame = +2
Query: 125 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELY 304
ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKIRY++LT+PS+LD+GKEL+
Sbjct: 6 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELF 65
Query: 305 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 484
IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG
Sbjct: 66 IKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 125
Query: 485 FYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEF 664
FYS++LVAD+V V SK+NDD+ Y WESSAGGSF VRP + + RGTKIV+H+KED +F
Sbjct: 126 FYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDF 185
Query: 665 MEE 673
+EE
Sbjct: 186 LEE 188
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 206 bits (504), Expect = 8e-54
Identities = 105/191 (54%), Positives = 139/191 (72%), Gaps = 6/191 (3%)
Frame = +2
Query: 116 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK 295
++ E FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKIR SLTDP +L +
Sbjct: 59 SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETE 118
Query: 296 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS----- 460
E+ +KI ++ L I DTG+GMT+ DL+NNLGTIA+SGT F+ L A S
Sbjct: 119 EMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSSDQQQD 178
Query: 461 MIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVL 637
+IGQFGVGFY+++LVADRV V +K+NDD+QY+WES + SFT+ D G L RGT+I L
Sbjct: 179 LIGQFGVGFYAAFLVADRVVVTTKNNDDDQYIWESDS-ASFTISKDPRGNTLKRGTQITL 237
Query: 638 HVKEDLAEFME 670
++KE+ A+F+E
Sbjct: 238 YLKEEAADFLE 248
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 140 bits (338), Expect = 1e-33
Identities = 84/199 (42%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Frame = +2
Query: 89 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 268
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89
Query: 269 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 448
+ G I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E +
Sbjct: 90 -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147
Query: 449 ADISMIGQFGVGFYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPDSGEPLGR 619
A+ ++IGQFGVGFYS+++VAD V V ++ +D + W + S+ + SG L
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG--LQT 204
Query: 620 GTKIVLHVK-EDLAEFMEE 673
GTKI + +K D A + EE
Sbjct: 205 GTKIEIRLKVGDSATYAEE 223
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 140 bits (338), Expect = 1e-33
Identities = 84/199 (42%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Frame = +2
Query: 89 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 268
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89
Query: 269 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 448
+ G I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E +
Sbjct: 90 -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147
Query: 449 ADISMIGQFGVGFYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPDSGEPLGR 619
A+ ++IGQFGVGFYS+++VAD V V ++ +D + W + S+ + SG L
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG--LQT 204
Query: 620 GTKIVLHVK-EDLAEFMEE 673
GTKI + +K D A + EE
Sbjct: 205 GTKIEIRLKVGDSATYAEE 223
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 138 bits (333), Expect = 4e-33
Identities = 83/198 (41%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Frame = +2
Query: 89 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 268
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89
Query: 269 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 448
+ G I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E +
Sbjct: 90 -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147
Query: 449 ADISMIGQFGVGFYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPDSGEPLGR 619
A+ ++IGQFGVGFYS+++VAD V V ++ +D + W + S+ + SG L
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG--LQT 204
Query: 620 GTKIVLHVK-EDLAEFME 670
GTKI + +K D A + E
Sbjct: 205 GTKIEIRLKVGDSATYAE 222
>Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical
protein F49C12.4 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +2
Query: 173 INTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIID 352
+N + N ++F ++ +S+ + YESLT + + +I I+PNK E +T++
Sbjct: 75 LNPYRGNHDLFWSAFVNKTSECDNLKEYESLTIRPVANKDEVKFI-ILPNK-ETNITMVT 132
Query: 353 TGIG 364
GIG
Sbjct: 133 LGIG 136
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.00
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 304 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 465
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.00
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 304 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 465
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 1.3
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 325 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 465
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 1.3
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +1
Query: 292 QRAVHQDHSQQERGHSYDH 348
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 319 QQERGHSYDHRYRYWYDQGRFGEQFGN 399
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 436 SLHESFSTRFRDGSQIVHQIGLGHTNTGIDDRKSALVL 323
SLH + R R+ + V +GLG + DDRK+ V+
Sbjct: 155 SLHFKYEQRLREELRNVEYVGLGCYSWNKDDRKNEQVV 192
>AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical
protein Y37D8A.9b protein.
Length = 337
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 206 LRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL- 382
LR+++ + D + + + +D E YIK IP NE T+ D I +AD+
Sbjct: 134 LRKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIK 193
Query: 383 VNNLGTI 403
+ NL I
Sbjct: 194 ITNLALI 200
>AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical
protein Y37D8A.9a protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 206 LRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL- 382
LR+++ + D + + + +D E YIK IP NE T+ D I +AD+
Sbjct: 134 LRKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIK 193
Query: 383 VNNLGTI 403
+ NL I
Sbjct: 194 ITNLALI 200
>Z81139-3|CAB03482.1| 520|Caenorhabditis elegans Hypothetical
protein W05H5.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +2
Query: 356 GIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKH 535
G+GM D+ ++ GT +G +A + M+G GF V S
Sbjct: 53 GVGMGANDIADSFGTSVGTGILTVTQAFILATVVEMMGSVASGFSGDGQQLQVVNTESYE 112
Query: 536 NDDEQYV 556
++ ++ V
Sbjct: 113 DNPDELV 119
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 310 DHSQQERGHSYDHRYRYWYDQGR-FGEQFGN 399
D SQQ+ ++Y + + YDQG +G +GN
Sbjct: 334 DQSQQQSDNNYGNANQDSYDQGNDYGNDYGN 364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,040,333
Number of Sequences: 27780
Number of extensions: 356386
Number of successful extensions: 1043
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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