Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_J13
(763 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 146 5e-34
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 143 4e-33
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 142 6e-33
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 142 8e-33
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 137 2e-31
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 135 1e-30
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 135 1e-30
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 131 2e-29
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 129 8e-29
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 128 1e-28
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 127 3e-28
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 122 1e-26
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 121 2e-26
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 121 2e-26
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 119 7e-26
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 118 1e-25
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 118 1e-25
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 118 2e-25
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 111 1e-23
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 111 1e-23
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 110 4e-23
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 106 5e-22
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 106 7e-22
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 105 2e-21
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 104 3e-21
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 104 3e-21
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 103 5e-21
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 102 8e-21
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 102 1e-20
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 99 6e-20
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 99 6e-20
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 100 8e-20
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 98 2e-19
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 97 6e-19
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 93 5e-18
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 92 2e-17
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 92 2e-17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 90 6e-17
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 89 8e-17
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 87 3e-16
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 87 3e-16
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 85 2e-15
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 84 3e-15
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 83 1e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 82 2e-14
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 81 2e-14
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 81 3e-14
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 81 4e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 81 4e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 80 5e-14
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 79 9e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 79 1e-13
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 79 1e-13
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 78 3e-13
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 77 4e-13
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 77 5e-13
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 76 8e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 75 1e-12
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 75 2e-12
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 75 2e-12
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 75 2e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 75 2e-12
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 74 3e-12
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 74 4e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 6e-12
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 73 8e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 1e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 73 1e-11
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 73 1e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 72 1e-11
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 72 1e-11
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 72 2e-11
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 70 5e-11
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 70 7e-11
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 69 1e-10
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 69 1e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 69 1e-10
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 69 1e-10
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 69 2e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 69 2e-10
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 68 3e-10
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 67 4e-10
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 67 5e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 66 7e-10
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 65 2e-09
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 64 4e-09
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 64 5e-09
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 63 8e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 62 1e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 58 2e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 58 3e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 57 5e-07
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 8e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 45 0.002
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 43 0.010
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 43 0.010
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 41 0.038
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.051
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 40 0.067
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 40 0.067
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 38 0.21
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 38 0.27
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q22LV7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.4
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 36 1.4
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 36 1.4
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 35 1.9
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.5
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.5
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 35 2.5
UniRef50_Q4HP18 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_UPI000065DB35 Cluster: UPI000065DB35 related cluster; n... 33 5.8
UniRef50_Q54IP4 Cluster: SH2 domain-containing protein; n=1; Dic... 33 5.8
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 33 7.7
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 33 7.7
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 7.7
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 7.7
UniRef50_A0DGU6 Cluster: Chromosome undetermined scaffold_5, who... 33 7.7
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 146 bits (354), Expect = 5e-34
Identities = 67/97 (69%), Positives = 75/97 (77%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF
Sbjct: 203 FFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAML 262
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV AHH+FT+G+D+DTRAY TSAT+IIA+P
Sbjct: 263 TIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIP 299
Score = 93.5 bits (222), Expect = 5e-18
Identities = 54/125 (43%), Positives = 63/125 (50%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 80 RMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGA 139
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + D++ LF +V ITA AGAIT+LLTDRN+
Sbjct: 140 SSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNM 199
Query: 463 NTSFF 477
NTSFF
Sbjct: 200 NTSFF 204
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 143 bits (347), Expect = 4e-33
Identities = 66/97 (68%), Positives = 74/97 (76%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMM 278
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV AHH+FTVG+D+DTRAY TSAT+IIA+P
Sbjct: 279 AIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIP 315
Score = 102 bits (245), Expect = 8e-21
Identities = 59/125 (47%), Positives = 66/125 (52%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+
Sbjct: 96 RMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGV 155
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS S Q PLFV AV +TA A IT+LLTDRNL
Sbjct: 156 SSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNL 215
Query: 463 NTSFF 477
NT+FF
Sbjct: 216 NTTFF 220
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 142 bits (345), Expect = 6e-33
Identities = 66/97 (68%), Positives = 74/97 (76%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMM 278
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV AHH+FTVG+D+DTRAY TSAT+IIA+P
Sbjct: 279 SIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIP 315
Score = 97.5 bits (232), Expect = 3e-19
Identities = 57/125 (45%), Positives = 65/125 (52%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+
Sbjct: 96 RMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGV 155
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + Q PLFV +V ITA A IT+LLTDRNL
Sbjct: 156 SSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNL 215
Query: 463 NTSFF 477
NT+FF
Sbjct: 216 NTTFF 220
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 142 bits (344), Expect = 8e-33
Identities = 65/97 (67%), Positives = 74/97 (76%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMM 278
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV AHH+FTVG+D+DTRAY TSAT+IIA+P
Sbjct: 279 AIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIP 315
Score = 99 bits (238), Expect = 6e-20
Identities = 57/125 (45%), Positives = 66/125 (52%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+
Sbjct: 96 RMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGV 155
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + Q PLFV +V +TA A IT+LLTDRNL
Sbjct: 156 SSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNL 215
Query: 463 NTSFF 477
NT+FF
Sbjct: 216 NTTFF 220
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 137 bits (332), Expect = 2e-31
Identities = 84/188 (44%), Positives = 102/188 (54%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGI
Sbjct: 93 RMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGI 152
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS SFDQ+PLFV AVGITAF AGAIT+LLTDRNL
Sbjct: 153 SSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNL 212
Query: 463 NTSFF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNL 642
NTSFF P + + F+ L F+F++ +F F +K +K L ++
Sbjct: 213 NTSFFDPAGGGDP-ILYQHLFWFFGHPKLMFSFSQDLVSFHMLFPKKVEKSK--LLVVSV 269
Query: 643 CYTSNWVI 666
+ +W++
Sbjct: 270 SFMQSWLL 277
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 135 bits (327), Expect = 1e-30
Identities = 62/97 (63%), Positives = 73/97 (75%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 196 FFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGMVYAMI 255
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V AHH+FTVG+D+DTRAY T+AT+IIAVP
Sbjct: 256 AIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVP 292
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 135 bits (327), Expect = 1e-30
Identities = 65/97 (67%), Positives = 72/97 (74%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K F
Sbjct: 222 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMI 280
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V AHH+FTVG+D+DTRAY T+AT+IIAVP
Sbjct: 281 SIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVP 317
Score = 100 bits (240), Expect = 3e-20
Identities = 59/141 (41%), Positives = 71/141 (50%)
Frame = +1
Query: 55 NXFVXXXXXXXXXXXXRINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHR 234
N FV R+N SF VE G+GTG TVYPPLS +H
Sbjct: 83 NWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHS 142
Query: 235 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 414
G +VDLAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 143 GGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSL 202
Query: 415 XXXAGAITILLTDRNLNTSFF 477
AGAIT+LLTDRN NT+FF
Sbjct: 203 PVLAGAITMLLTDRNFNTTFF 223
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 131 bits (317), Expect = 2e-29
Identities = 74/158 (46%), Positives = 90/158 (56%)
Frame = -3
Query: 476 KNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXX 297
K +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 15 KKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTA 74
Query: 296 XXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTXLLEINNIREGGRXQKL 117
I+E PAKC+EKI STD P CAI SGG TVHPVP P ST L + ++EGG Q L
Sbjct: 75 PKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNL 134
Query: 116 XXLMXXXXXXXXXXXXGTXQFPKPPMRRGITIKKMRIK 3
+ GT QFP PP+ G+T+KK+ K
Sbjct: 135 MLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITK 172
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 129 bits (311), Expect = 8e-29
Identities = 71/125 (56%), Positives = 75/125 (60%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGI
Sbjct: 69 RMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGI 128
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS SFDQ+PLF+ AVGITA AGAIT+LLTDRNL
Sbjct: 129 SSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNL 188
Query: 463 NTSFF 477
NTSFF
Sbjct: 189 NTSFF 193
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILI 559
FFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 192 FFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 128 bits (309), Expect = 1e-28
Identities = 61/97 (62%), Positives = 71/97 (73%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F
Sbjct: 227 FFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMV 285
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV AHH++TVG+D+DTRAY T+AT+IIAVP
Sbjct: 286 SIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVP 322
Score = 98.3 bits (234), Expect = 2e-19
Identities = 56/125 (44%), Positives = 67/125 (53%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 104 RLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGA 163
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS S ++PLFV ++ +TAF AGAIT+LLTDRN
Sbjct: 164 SSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNF 223
Query: 463 NTSFF 477
NTSFF
Sbjct: 224 NTSFF 228
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 127 bits (307), Expect = 3e-28
Identities = 58/97 (59%), Positives = 71/97 (73%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F
Sbjct: 219 FYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMF 277
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V +HH++ VG+D+DTRAY T+AT+IIAVP
Sbjct: 278 SIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVP 314
Score = 102 bits (244), Expect = 1e-20
Identities = 58/125 (46%), Positives = 67/125 (53%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GI
Sbjct: 96 RLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGI 155
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV A+ +TA AGAIT+LLTDRN
Sbjct: 156 SSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNF 215
Query: 463 NTSFF 477
NTSF+
Sbjct: 216 NTSFY 220
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 122 bits (294), Expect = 1e-26
Identities = 56/97 (57%), Positives = 69/97 (71%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK F
Sbjct: 220 FFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMA 278
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V +HH++ VG+D DTRAY TSAT+IIA+P
Sbjct: 279 SIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIP 315
Score = 96.7 bits (230), Expect = 6e-19
Identities = 56/125 (44%), Positives = 65/125 (52%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
RIN +F VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL I
Sbjct: 97 RINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSI 156
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV ++ ITAF + IT+LL DRN
Sbjct: 157 SSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNF 216
Query: 463 NTSFF 477
NTSFF
Sbjct: 217 NTSFF 221
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 121 bits (292), Expect = 2e-26
Identities = 58/97 (59%), Positives = 68/97 (70%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K F
Sbjct: 220 FFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMC 278
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V +HH++TVG+D+DTRAY T+AT+IIAVP
Sbjct: 279 SIGILGFVVWSHHMYTVGLDVDTRAYFTAATLIIAVP 315
Score = 91.9 bits (218), Expect = 2e-17
Identities = 53/125 (42%), Positives = 62/125 (49%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N S+ +ENG GTG T+YPPLS +H G SVDLAIF LHL+GI
Sbjct: 97 RLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGI 156
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS +L LF AV ITA AG IT++LTDRN
Sbjct: 157 SSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNF 216
Query: 463 NTSFF 477
NTSFF
Sbjct: 217 NTSFF 221
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 121 bits (291), Expect = 2e-26
Identities = 56/97 (57%), Positives = 67/97 (69%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK F
Sbjct: 220 FFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMA 278
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V +HH++ VG+D DTRAY TSAT+IIA+P
Sbjct: 279 SIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIP 315
Score = 99.5 bits (237), Expect = 8e-20
Identities = 58/125 (46%), Positives = 64/125 (51%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
RIN F VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL I
Sbjct: 97 RINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSI 156
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS S ++PLFV A+ ITAF + IT+LL DRN
Sbjct: 157 SSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNF 216
Query: 463 NTSFF 477
NTSFF
Sbjct: 217 NTSFF 221
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 119 bits (287), Expect = 7e-26
Identities = 54/97 (55%), Positives = 65/97 (67%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K F
Sbjct: 222 FYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASM 281
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V HH+F G+DIDTRAY T+AT++IAVP
Sbjct: 282 GIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVP 318
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +1
Query: 178 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 357
G G G T+YPPLS++ G +DLA+FSLH+AG+SS F
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMS 182
Query: 358 L-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
L P+ + + T+ A +T+LL DR+ +TSF+
Sbjct: 183 LNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFY 223
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 118 bits (285), Expect = 1e-25
Identities = 55/97 (56%), Positives = 67/97 (69%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK F
Sbjct: 223 FYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAML 281
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV AHH++T GID T+AY T+AT++IA+P
Sbjct: 282 MIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIP 318
Score = 89.8 bits (213), Expect = 6e-17
Identities = 55/141 (39%), Positives = 62/141 (43%)
Frame = +1
Query: 55 NXFVXXXXXXXXXXXXRINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHR 234
N FV R+N SF E G GTG TVYPPLSS +H
Sbjct: 84 NYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHS 143
Query: 235 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 414
G SVDL IFS HL GI S LPLFV +V +T+F
Sbjct: 144 GASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAI 203
Query: 415 XXXAGAITILLTDRNLNTSFF 477
A AIT+LL DRN NTSF+
Sbjct: 204 PVLAAAITLLLFDRNFNTSFY 224
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 118 bits (285), Expect = 1e-25
Identities = 56/97 (57%), Positives = 68/97 (70%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F
Sbjct: 246 FYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMM 304
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV +HH++TVG+D+DTRAY T+AT+IIA+P
Sbjct: 305 SIGLLGFIVWSHHMYTVGLDVDTRAYFTAATLIIAIP 341
Score = 87.0 bits (206), Expect = 4e-16
Identities = 51/125 (40%), Positives = 60/125 (48%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N S+ +ENG GTG T+YPPLS +H VDL IF LHL+GI
Sbjct: 123 RLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGI 182
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS +L LF AV ITA A AIT+LLTDRNL
Sbjct: 183 SSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNL 242
Query: 463 NTSFF 477
NTSF+
Sbjct: 243 NTSFY 247
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 118 bits (284), Expect = 2e-25
Identities = 51/75 (68%), Positives = 57/75 (76%)
Frame = +1
Query: 475 F*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTS 654
F S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +NLCY S
Sbjct: 13 FWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYIS 72
Query: 655 NWVIRIHCLSSSYIH 699
NW+I I+CLSSSYI+
Sbjct: 73 NWIISIYCLSSSYIY 87
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 111 bits (268), Expect = 1e-23
Identities = 52/97 (53%), Positives = 66/97 (68%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F
Sbjct: 325 FFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALV 383
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V AHH++TVG+ + +AY AT++IAVP
Sbjct: 384 AIGGLGFVVWAHHMYTVGMTLTQQAYFMVATMVIAVP 420
Score = 78.6 bits (185), Expect = 2e-13
Identities = 42/125 (33%), Positives = 61/125 (48%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N S+ ++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNF 321
Query: 463 NTSFF 477
T+FF
Sbjct: 322 GTTFF 326
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 111 bits (268), Expect = 1e-23
Identities = 52/97 (53%), Positives = 65/97 (67%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F
Sbjct: 262 FYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMV 320
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V AHH+FT G+ ++ + Y T+AT++IAVP
Sbjct: 321 AIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVP 357
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/101 (43%), Positives = 57/101 (56%)
Frame = +1
Query: 175 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 354
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 355 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
++PLFV +V +TAF A AIT+LLTDRN T+F+
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFY 263
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 110 bits (264), Expect = 4e-23
Identities = 51/97 (52%), Positives = 63/97 (64%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS + F
Sbjct: 225 FFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAMG 283
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+V HH++T G+++DTRAY TS TI+I++P
Sbjct: 284 CIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIP 320
Score = 47.6 bits (108), Expect = 3e-04
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAG 279
RIN S E G GTG T+YPPLS+++ +VD+ IF L ++G
Sbjct: 101 RINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSG 160
Query: 280 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 459
++S + L + ++ IT+ G + +LL+D +
Sbjct: 161 VASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLH 220
Query: 460 LNTSFF 477
NT FF
Sbjct: 221 FNTLFF 226
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 106 bits (255), Expect = 5e-22
Identities = 49/97 (50%), Positives = 65/97 (67%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 237 FFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMA 295
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F V +HH+FTVG+D D+RAY + A++IIA+P
Sbjct: 296 SIGFLGFCVWSHHMFTVGLDADSRAYFSGASLIIAIP 332
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/125 (37%), Positives = 64/125 (51%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
RIN +F ++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+
Sbjct: 114 RINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGL 173
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV +V ITA A +T+LL DRN
Sbjct: 174 SSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNF 233
Query: 463 NTSFF 477
NTSFF
Sbjct: 234 NTSFF 238
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 106 bits (254), Expect = 7e-22
Identities = 60/125 (48%), Positives = 67/125 (53%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+
Sbjct: 79 RLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGV 138
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + + LFV +V ITA AGAIT+LLTDRN
Sbjct: 139 SSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNF 198
Query: 463 NTSFF 477
NTSFF
Sbjct: 199 NTSFF 203
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF 523
FFDPAGGGDPILYQHLF
Sbjct: 202 FFDPAGGGDPILYQHLF 218
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 105 bits (251), Expect = 2e-21
Identities = 49/79 (62%), Positives = 57/79 (72%)
Frame = +2
Query: 527 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 706
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 707 IDIDTRAYXTSATIIIAVP 763
+D+DTRAY TSAT+IIA+P
Sbjct: 62 MDVDTRAYFTSATMIIAIP 80
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 104 bits (249), Expect = 3e-21
Identities = 62/125 (49%), Positives = 68/125 (54%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGI
Sbjct: 97 RMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGI 156
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS S Q PLFV +V ITA A IT+LLTDRNL
Sbjct: 157 SSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNL 216
Query: 463 NTSFF 477
NT+FF
Sbjct: 217 NTTFF 221
Score = 96.7 bits (230), Expect = 6e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 622
FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 220 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 104 bits (249), Expect = 3e-21
Identities = 56/103 (54%), Positives = 64/103 (62%)
Frame = +1
Query: 169 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 348
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 349 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
++PLFV AV ITA AGAIT+LLTDRN+NTSFF
Sbjct: 97 PXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFF 139
Score = 49.6 bits (113), Expect = 8e-05
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGH 538
FFDPAGGGDPILYQHLF F GH
Sbjct: 138 FFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 103 bits (247), Expect = 5e-21
Identities = 48/97 (49%), Positives = 59/97 (60%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +F
Sbjct: 309 FFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMA 368
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+V HH+F VG D T + +S T+II VP
Sbjct: 369 SIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVP 405
Score = 48.0 bits (109), Expect = 3e-04
Identities = 37/100 (37%), Positives = 45/100 (45%)
Frame = +1
Query: 178 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 357
G G G T+YPPLS G VD +FSLHLAG+SS SF+
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS----LIGSVNFISTIFSRLSFN- 270
Query: 358 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
+ V A T+ A IT+LL DRN T+FF
Sbjct: 271 CSIIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFF 310
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 102 bits (245), Expect = 8e-21
Identities = 60/125 (48%), Positives = 66/125 (52%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGI
Sbjct: 85 RMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGI 144
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS S Q PLFV AV ITA A IT+LLTDRNL
Sbjct: 145 SSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNL 204
Query: 463 NTSFF 477
NT+FF
Sbjct: 205 NTTFF 209
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 102 bits (244), Expect = 1e-20
Identities = 58/125 (46%), Positives = 67/125 (53%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GI
Sbjct: 96 RLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGI 155
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV A+ +TA AGAIT+LLTDRN
Sbjct: 156 SSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNF 215
Query: 463 NTSFF 477
NTSF+
Sbjct: 216 NTSFY 220
Score = 42.3 bits (95), Expect = 0.013
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF 523
F+DPAGGGDPILYQHLF
Sbjct: 219 FYDPAGGGDPILYQHLF 235
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 99 bits (238), Expect = 6e-20
Identities = 48/74 (64%), Positives = 54/74 (72%)
Frame = +2
Query: 542 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 721
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 722 RAYXTSATIIIAVP 763
RAY TSAT+IIAVP
Sbjct: 215 RAYFTSATMIIAVP 228
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 99 bits (238), Expect = 6e-20
Identities = 46/97 (47%), Positives = 59/97 (60%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 229 FYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASI 288
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
V HH++T G+DIDTR Y ++AT+IIA+P
Sbjct: 289 WIAVLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIP 325
Score = 60.1 bits (139), Expect = 6e-08
Identities = 37/125 (29%), Positives = 49/125 (39%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF + G G+ T YPPLS S+D I LH GI
Sbjct: 107 RVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGI 165
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
S + DQ+ +FV +T+F AG++ LL DRN
Sbjct: 166 GSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNF 225
Query: 463 NTSFF 477
NTSF+
Sbjct: 226 NTSFY 230
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 99.5 bits (237), Expect = 8e-20
Identities = 60/141 (42%), Positives = 70/141 (49%)
Frame = +1
Query: 55 NXFVXXXXXXXXXXXXRINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHR 234
N FV R+N SF VE GAGTG TVYPPL+S AH
Sbjct: 81 NWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHS 140
Query: 235 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 414
G SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 141 GGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSL 200
Query: 415 XXXAGAITILLTDRNLNTSFF 477
AGAIT+LLTDR NT+FF
Sbjct: 201 PVLAGAITMLLTDRYFNTTFF 221
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFG 535
FFDPAGGGDPILYQHLF FFG
Sbjct: 220 FFDPAGGGDPILYQHLFWFFG 240
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +2
Query: 671 FIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV A H++ VG+D+DTRAY T+AT+IIAVP
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVP 280
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/97 (49%), Positives = 60/97 (61%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I Q
Sbjct: 203 FYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMA 261
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+V AHH++T G+DIDTR+Y T+AT+IIAVP
Sbjct: 262 SIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVP 298
Score = 46.8 bits (106), Expect = 6e-04
Identities = 32/99 (32%), Positives = 46/99 (46%)
Frame = +1
Query: 181 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 360
A G T YPPLSS SV+ ++FSLHLAGI+S + L
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSL 165
Query: 361 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
LF ++ + + A IT++LTD++L T F+
Sbjct: 166 SLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFY 204
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 96.7 bits (230), Expect = 6e-19
Identities = 56/125 (44%), Positives = 65/125 (52%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
RIN +F VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL I
Sbjct: 97 RINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSI 156
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV ++ ITAF + IT+LL DRN
Sbjct: 157 SSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNF 216
Query: 463 NTSFF 477
NTSFF
Sbjct: 217 NTSFF 221
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILIL 562
FF+ +GGGDPILY+HLF FFG I++L
Sbjct: 220 FFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 93.5 bits (222), Expect = 5e-18
Identities = 44/97 (45%), Positives = 60/97 (61%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+ + G + F
Sbjct: 222 FYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMI 280
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
V AHH+F VG+D+D+RAY +I+I +P
Sbjct: 281 LIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLP 317
Score = 63.3 bits (147), Expect = 6e-09
Identities = 40/125 (32%), Positives = 51/125 (40%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF E G G G T+YP L H + D +F++HL GI
Sbjct: 99 RLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGI 158
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS SF LF+ A ITA AG +T++L DRN
Sbjct: 159 SSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNF 218
Query: 463 NTSFF 477
NTSF+
Sbjct: 219 NTSFY 223
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 91.9 bits (218), Expect = 2e-17
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = +2
Query: 494 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 673
GDP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F +
Sbjct: 236 GDPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGY 294
Query: 674 IV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
V AHH+FTVG+DID+R+Y + AT II++P
Sbjct: 295 FVWAHHMFTVGLDIDSRSYFSIATSIISIP 324
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +1
Query: 187 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 363
+G T+YPPLS+ A G ++DL++ +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 364 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
++ ++ +T+ AIT LL DRN+N++ +
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIY 232
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 91.9 bits (218), Expect = 2e-17
Identities = 53/125 (42%), Positives = 63/125 (50%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
RIN F VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ I
Sbjct: 97 RINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSI 156
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV A+ ITA + +T+LL DRN
Sbjct: 157 SSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNF 216
Query: 463 NTSFF 477
NTSFF
Sbjct: 217 NTSFF 221
Score = 42.7 bits (96), Expect = 0.010
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFG 535
FF+ AGGGDPILY+HLF FFG
Sbjct: 220 FFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 89.8 bits (213), Expect = 6e-17
Identities = 42/84 (50%), Positives = 53/84 (63%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 237 FFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMA 295
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTR 724
F V +HH+FTVG+D D R
Sbjct: 296 SIGFLGFCVWSHHMFTVGLDADKR 319
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/125 (37%), Positives = 64/125 (51%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
RIN +F ++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+
Sbjct: 114 RINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGL 173
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV +V ITA A +T+LL DRN
Sbjct: 174 SSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNF 233
Query: 463 NTSFF 477
NTSFF
Sbjct: 234 NTSFF 238
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 89.4 bits (212), Expect = 8e-17
Identities = 43/97 (44%), Positives = 56/97 (57%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I +K F
Sbjct: 230 FFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGYRAIAYSSL 288
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
IV AHH+FT G R + + T++IAVP
Sbjct: 289 AISFLGLIVWAHHMFTSGTPGWLRMFFMATTMLIAVP 325
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/125 (37%), Positives = 64/125 (51%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
RIN +F ++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+
Sbjct: 114 RINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGL 173
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV +V ITA A +T+LL DRN
Sbjct: 174 SSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNF 233
Query: 463 NTSFF 477
NTSFF
Sbjct: 234 NTSFF 238
Score = 39.9 bits (89), Expect = 0.067
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGH--PEVYILIL 562
FF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 237 FFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/125 (37%), Positives = 64/125 (51%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
RIN +F ++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+
Sbjct: 114 RINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGL 173
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS + +LPLFV +V ITA A +T+LL DRN
Sbjct: 174 SSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNF 233
Query: 463 NTSFF 477
NTSFF
Sbjct: 234 NTSFF 238
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/97 (45%), Positives = 56/97 (57%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 237 FFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGV 295
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V AHH+F VG+ A+ +A+ +IAVP
Sbjct: 296 AIGFLGFLVWAHHMFAVGLGPLANAFFGAASFLIAVP 332
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Frame = +2
Query: 470 HFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXX 634
HFF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I Q ++ +
Sbjct: 223 HFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTA 281
Query: 635 XXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F V HH+FT D R AT+ +A+P
Sbjct: 282 IAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIP 324
Score = 33.5 bits (73), Expect = 5.8
Identities = 25/102 (24%), Positives = 39/102 (38%)
Frame = +1
Query: 172 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 351
++G G T+YPPLS+ + VDL + + +AG SS
Sbjct: 126 QHGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKM 183
Query: 352 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
+ LF +V + A +LL +R+L FF
Sbjct: 184 LDMSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFF 225
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/96 (42%), Positives = 55/96 (57%)
Frame = +2
Query: 476 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 655
F GGDPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+K F
Sbjct: 274 FFTVAGGDPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLA 332
Query: 656 XXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F V AHH+FT GID R+ + ++ I++P
Sbjct: 333 IGVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIP 368
Score = 36.7 bits (81), Expect = 0.63
Identities = 25/99 (25%), Positives = 40/99 (40%)
Frame = +1
Query: 181 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 360
A T T+Y PLS ++ +VD+ + LHL G+S+ + L
Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDL 236
Query: 361 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
+F + + A+ +LL DRN T+FF
Sbjct: 237 DIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFF 275
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/97 (40%), Positives = 54/97 (55%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I +K +
Sbjct: 238 FFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYTFVAASSV 296
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+ V AHH+F VG+ + + +++IA+P
Sbjct: 297 AIVLLGYGVWAHHMFAVGLGMYADIFFAVGSLLIAIP 333
Score = 37.5 bits (83), Expect = 0.36
Identities = 33/141 (23%), Positives = 45/141 (31%)
Frame = +1
Query: 55 NXFVXXXXXXXXXXXXRINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHR 234
N FV R+N F + G Y PLSS
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158
Query: 235 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 414
+ VD I L + GI S S ++PLFV + + A
Sbjct: 159 LQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILAL 218
Query: 415 XXXAGAITILLTDRNLNTSFF 477
A+ +LL DR L ++FF
Sbjct: 219 PALNSALAMLLIDRWLGSAFF 239
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 81.4 bits (192), Expect = 2e-14
Identities = 48/125 (38%), Positives = 59/125 (47%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGF 161
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
SS ++ +PLF AV TA A +T+ + DRN
Sbjct: 162 SSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNF 221
Query: 463 NTSFF 477
NTSFF
Sbjct: 222 NTSFF 226
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILIL 562
FF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 225 FFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/92 (42%), Positives = 53/92 (57%)
Frame = +2
Query: 488 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 667
GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F
Sbjct: 264 GGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGAL 322
Query: 668 XFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V AHH++ G+ + + T+IIA+P
Sbjct: 323 SFVVWAHHMYVSGMYPYFGFFFATTTLIIAIP 354
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/98 (38%), Positives = 57/98 (58%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HFF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++ ++ F
Sbjct: 234 HFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMAL 292
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + HH+F G+ ++ T++++ IAVP
Sbjct: 293 IATGVLAFGLWVHHMFVAGLPRLGESFFTASSMAIAVP 330
Score = 38.7 bits (86), Expect = 0.16
Identities = 29/125 (23%), Positives = 45/125 (36%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N S+ V+ G G Y PLS G+ D+ + +
Sbjct: 112 RLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEV 171
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
S+ S D++PLFV ++ +T+F A T L+ DR +
Sbjct: 172 SALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLV 231
Query: 463 NTSFF 477
T FF
Sbjct: 232 GTHFF 236
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 80.6 bits (190), Expect = 4e-14
Identities = 39/97 (40%), Positives = 57/97 (58%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 380 FFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIY 438
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
++V HH++ VG+D +R ++ TI+I++P
Sbjct: 439 VMAYMGYLVWGHHMYLVGLDHRSRTMYSTITIMISMP 475
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 80.2 bits (189), Expect = 5e-14
Identities = 40/98 (40%), Positives = 54/98 (55%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K F
Sbjct: 227 NFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYSSMVFAI 285
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V HH+FT G+ A AT+ IA+P
Sbjct: 286 VLIGFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIP 323
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 79.4 bits (187), Expect = 9e-14
Identities = 39/98 (39%), Positives = 55/98 (56%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HFF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F
Sbjct: 263 HFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYAS 321
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V HH FT+G + A+ AT+II++P
Sbjct: 322 GAISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIP 359
Score = 34.7 bits (76), Expect = 2.5
Identities = 28/124 (22%), Positives = 40/124 (32%)
Frame = +1
Query: 106 INXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 285
+N SF V N A TG YPPL+ VD I++L ++GI
Sbjct: 142 LNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIG 201
Query: 286 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 465
+ +P+F GA+ +L DR L+
Sbjct: 202 TTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLD 261
Query: 466 TSFF 477
FF
Sbjct: 262 FHFF 265
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 610
FF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 245 FFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 65.7 bits (153), Expect = 1e-09
Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLH 270
R+N SF +E G GTG T+ YPPLS +H G SVDLAIF+LH
Sbjct: 125 RLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALH 184
Query: 271 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 450
L+G+SS +L LF + IT++LT
Sbjct: 185 LSGVSSLLGSINFITTVANMRTPGIKLHKLALF-------GWATWSSRSRYFLGITMVLT 237
Query: 451 DRNLNTSFF 477
DRN NTSFF
Sbjct: 238 DRNFNTSFF 246
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = +2
Query: 686 HHIFTVGIDIDTRAYXTSATIIIAVP 763
HH++TVG+D+DTRAY T+AT+IIAVP
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVP 374
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/93 (44%), Positives = 54/93 (58%)
Frame = +2
Query: 485 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 664
AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F
Sbjct: 308 AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGV 366
Query: 665 XXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F V AHH+F G+D RA + ++ IAVP
Sbjct: 367 LSFGVWAHHMFATGLDPRLRASFMAVSLAIAVP 399
Score = 42.3 bits (95), Expect = 0.013
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +1
Query: 181 AGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 345
A TG T+Y PLS N A+ G VDL + LHL+G+S+
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNV 263
Query: 346 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
S+ L +F + + AI +LL DRN TSFF
Sbjct: 264 SWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF 307
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/98 (38%), Positives = 53/98 (54%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HFF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F
Sbjct: 258 HFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSI 316
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V HH FT+G ++ + T+ I++P
Sbjct: 317 IAISVLSFLVWTHHFFTMGNSASVNSFFSITTMAISIP 354
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 77.4 bits (182), Expect = 4e-13
Identities = 41/98 (41%), Positives = 52/98 (53%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
+FF+ GG + YQHLF FGHPEVYILILP GIIS +I +K F
Sbjct: 238 NFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLFGYSVMVFST 296
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F V +HH+FTVG+ + + T+ IAVP
Sbjct: 297 ALIGFMGFTVWSHHMFTVGMGPVVNSIFSLTTMAIAVP 334
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/97 (39%), Positives = 54/97 (55%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
F +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS G K +
Sbjct: 229 FLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAKRYILTAFL 285
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V HH+F G +I TR + + TI+I++P
Sbjct: 286 IATIISFVVWMHHMFITGTNIYTRLFYSITTILISIP 322
Score = 41.1 bits (92), Expect = 0.029
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 1/126 (0%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 279
R+N S+ E+GA G T+Y PL++ I G +DLA ++ L
Sbjct: 104 RLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFLFS 163
Query: 280 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 459
+S + ++P+F ++ T +LL DRN
Sbjct: 164 LSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRN 223
Query: 460 LNTSFF 477
L T FF
Sbjct: 224 LGTEFF 229
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/97 (39%), Positives = 49/97 (50%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +K F
Sbjct: 245 FFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIASF 303
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
IV AHH+F G R T++IA+P
Sbjct: 304 GITFLSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIP 340
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/98 (36%), Positives = 53/98 (54%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II ++ F
Sbjct: 174 NFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII-PVFARRPLFGYTSMVFAV 232
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + HH+F G+ TR + T++IAVP
Sbjct: 233 WAITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVP 270
Score = 37.1 bits (82), Expect = 0.47
Identities = 27/94 (28%), Positives = 37/94 (39%)
Frame = +1
Query: 196 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 375
T YPP S N + L +F +HL G SS +F + LFV
Sbjct: 85 TGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVH 142
Query: 376 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
+ AGA+T+L D+ L T+FF
Sbjct: 143 TLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFF 176
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/91 (40%), Positives = 50/91 (54%)
Frame = +2
Query: 491 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 670
GG P+L+QHLF F GHPEVYI+++P GI S +I+ +K F
Sbjct: 287 GGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLS 345
Query: 671 FIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV AHH+F G++ + T+IIAVP
Sbjct: 346 FIVWAHHMFVTGMNPFLGSVFMFLTLIIAVP 376
Score = 37.9 bits (84), Expect = 0.27
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +1
Query: 169 VENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 336
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 166 LETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRV 225
Query: 337 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 226 KGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFF 272
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/97 (38%), Positives = 55/97 (56%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K F
Sbjct: 261 FFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVV 319
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + AHH+F G+ I + + ++A+ ++AVP
Sbjct: 320 TMSFLSFGLWAHHMFATGLPILSLSLFSAASTMVAVP 356
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
H F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+ F
Sbjct: 262 HIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYAS 320
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F V HH FT+G + AT++I++P
Sbjct: 321 GAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIP 358
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/109 (41%), Positives = 52/109 (47%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GI
Sbjct: 96 RLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGI 155
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 429
SS + +LPLFV A+ +TA AG
Sbjct: 156 SSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 74.1 bits (174), Expect = 3e-12
Identities = 40/97 (41%), Positives = 50/97 (51%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S KE F
Sbjct: 225 FFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLSTYT-TKEMFGNQTMILAMG 283
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+ Y T+ TI+IA+P
Sbjct: 284 FNSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALP 320
Score = 52.8 bits (121), Expect = 9e-06
Identities = 46/199 (23%), Positives = 76/199 (38%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N S +E G+GTG T+YPPLS+++++ G +D IF L AGI
Sbjct: 104 RVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGI 161
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
+S D++ ++ +T+F ++ DR+
Sbjct: 162 ASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHY 221
Query: 463 NTSFF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNL 642
NT FF S P + + F+ +Y + S + K F L
Sbjct: 222 NTMFFESSNSGDP-VLYQHLFWFFGHPEVYIMILPGFGIISLLLSTYTTKEMFGNQTMIL 280
Query: 643 CYTSNWVIRIHCLSSSYIH 699
N +R+ L +SY+H
Sbjct: 281 AMGFNSFVRLFGLGTSYVH 299
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/95 (35%), Positives = 48/95 (50%)
Frame = +2
Query: 476 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 655
FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++ +K F
Sbjct: 246 FDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLG 304
Query: 656 XXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAV 760
F HH+F G T+I+ V
Sbjct: 305 IAFVGFFAWGHHMFVSGQSTFAGGLFGVLTMIVGV 339
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.3 bits (172), Expect = 6e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +1
Query: 514 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 684
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 72.9 bits (171), Expect = 8e-12
Identities = 35/94 (37%), Positives = 50/94 (53%)
Frame = +2
Query: 482 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 661
P GGG +L+QHLF FFGHPEVYI ILP GI+SHI+ ++
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIG 328
Query: 662 XXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
++V HH+F G++ + + T+II +P
Sbjct: 329 FLSYVVWGHHMFVSGMNPLSSLVFSFPTLIITIP 362
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 208 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 387
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 388 TAFXXXXXXXXXAGAITILLTDR 456
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 217 FFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIFGYTAIALSSI 275
Query: 653 XXXXXXFI-V*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+ V HH+FT + + ++ T+ IA+P
Sbjct: 276 AIAFLSALGVWMHHMFTAIDNTLVQIVSSATTMAIAIP 313
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 72.5 bits (170), Expect = 1e-11
Identities = 40/98 (40%), Positives = 52/98 (53%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
H +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 244 HLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFAT 301
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
V AHH+F G + + + T +I+VP
Sbjct: 302 LSIGALSMAVWAHHMFVTGAVL--LPFFSFMTFLISVP 337
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/98 (38%), Positives = 54/98 (55%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HFF A GDPIL+QHLF FFGHPEVYI+ +P G++S II ++ F
Sbjct: 241 HFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSI 298
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + HH+FT G+ + T+++ +IA+P
Sbjct: 299 VAIGFIGFGLWVHHMFTAGLPQLGSNFFTASSAMIAIP 336
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/97 (36%), Positives = 52/97 (53%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 245 FFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALI 303
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + HH+FT GI + + ++A++ +A+P
Sbjct: 304 GTGFFSFGLWVHHMFTTGIPSLSLGFFSAASMAVAIP 340
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/98 (39%), Positives = 51/98 (52%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HF+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 257 HFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYAT 315
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V HH FT+G + + + +T+IIA+P
Sbjct: 316 ISITVLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIP 353
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/97 (39%), Positives = 50/97 (51%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ + E
Sbjct: 235 FFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAI 293
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + HH+FT GI A ++A+ ++AVP
Sbjct: 294 SLAVLSFGLWVHHMFTTGIPHMGLALFSAASTLVAVP 330
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +2
Query: 527 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 706
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 707 IDIDTRAYXTSATIIIAVP 763
D+ T + +S T++I +P
Sbjct: 61 YDVHTAVFFSSVTMVIGIP 79
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/97 (38%), Positives = 50/97 (51%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ +
Sbjct: 235 FFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAV 293
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + HH+FT GI A+ ++A+ ++AVP
Sbjct: 294 ALGVLSFGLWVHHMFTTGIPHLGLAFFSAASTLVAVP 330
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/97 (36%), Positives = 51/97 (52%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 304 FFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALV 362
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + HH+FT GI + ++ +A+ +A+P
Sbjct: 363 GTAFLSFGLWVHHMFTTGIPQLSLSFFQAASTAVAIP 399
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/77 (38%), Positives = 40/77 (51%)
Frame = +2
Query: 476 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 655
FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +K F
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLG 297
Query: 656 XXXXXFIV*AHHIFTVG 706
F HH+FT G
Sbjct: 298 IAFVGFFTWGHHMFTSG 314
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/93 (38%), Positives = 51/93 (54%)
Frame = +2
Query: 485 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 664
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++ +K F
Sbjct: 272 AGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAG 330
Query: 665 XXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV HH+F G++ AT++IA+P
Sbjct: 331 LGFIVWGHHMFVSGMNPGLGMTFMVATMMIALP 363
Score = 37.5 bits (83), Expect = 0.36
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = +1
Query: 175 NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 345
+GA G T YPPLS ++ G + L + + G+SS
Sbjct: 155 HGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGM 214
Query: 346 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
+ +LPL + A+ ITA A ++L DR + T FF
Sbjct: 215 TMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFF 258
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/98 (37%), Positives = 49/98 (50%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HFF GG+ + + ++F FGHPEVYILILP FG+ S I S G K F
Sbjct: 282 HFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWAT 340
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V HH FT+G A A+++I +P
Sbjct: 341 ISIAFLSFLVWLHHFFTMGQSGHINAVFGIASMLIGIP 378
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/98 (34%), Positives = 51/98 (52%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HFFD A GG P+L+QHLF F HP VY+++LP GI+S + ++
Sbjct: 254 HFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDAL-PTFCRRPLVAYEAVAVST 312
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F V HH+F GI A+ +A+++I++P
Sbjct: 313 VATMLIGFEVWVHHMFATGIAPLALAFFGAASMLISIP 350
Score = 33.1 bits (72), Expect = 7.7
Identities = 23/92 (25%), Positives = 34/92 (36%)
Frame = +1
Query: 202 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 381
Y PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 382 GITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
+ + A +L DRN T FF
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFF 256
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HFF GG+ +LY +LF +GHPEVY ++LP FG IS II +K F
Sbjct: 281 HFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMVIAT 339
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+ V HH FT+G + ++AT+++ +P
Sbjct: 340 FAIGGISWGVWLHHFFTMGAGPGINIFFSTATMLVGIP 377
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/97 (32%), Positives = 50/97 (51%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 261 FFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAV 319
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F + HH+FT G+ + + ++A+ + +P
Sbjct: 320 GTGFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIP 356
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/92 (36%), Positives = 51/92 (55%)
Frame = +2
Query: 488 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 667
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASL 334
Query: 668 XFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
FIV HH+FT G++ +T++IA+P
Sbjct: 335 GFIVWGHHMFTSGMNPAVGMAFMVSTMMIALP 366
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 66.5 bits (155), Expect = 7e-10
Identities = 35/97 (36%), Positives = 51/97 (52%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +K F
Sbjct: 229 WFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQM 287
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+V AHH+FTVG + T +IAVP
Sbjct: 288 GIVVLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVP 324
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = +2
Query: 488 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 667
GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S K +
Sbjct: 262 GGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLSFFARKPHHWYRGTVWAMVLVTVLS 321
Query: 668 XFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+ HH+F G+ T++I++P
Sbjct: 322 AMVY-GHHMFMTGMSPLLGEGFMLFTLLISIP 352
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/99 (27%), Positives = 42/99 (42%)
Frame = +1
Query: 181 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 360
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 361 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
PL + + +TA A +LL DR+ T FF
Sbjct: 215 PLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFF 253
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/97 (34%), Positives = 48/97 (49%)
Frame = +2
Query: 473 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 652
FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++ + +K +
Sbjct: 221 FFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYNSGLFAFV 279
Query: 653 XXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F AHH+F G+ + T + AVP
Sbjct: 280 LLTIVGFSSWAHHMFATGMSFTEKTVFMLGT-LAAVP 315
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/96 (35%), Positives = 48/96 (50%)
Frame = +2
Query: 476 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 655
F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 238 FNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLA 296
Query: 656 XXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
IV HH+F VGI + +T+I+AVP
Sbjct: 297 IVLVSCIVWLHHMFAVGIPEAWQIAFMISTLIVAVP 332
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 62.9 bits (146), Expect = 8e-09
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +2
Query: 545 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 724
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 725 AYXTSATIIIAVP 763
Y +SAT++IA+P
Sbjct: 60 VYFSSATLLIALP 72
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 62.5 bits (145), Expect = 1e-08
Identities = 46/145 (31%), Positives = 59/145 (40%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 282
R+N SF VENGAGTG TVYPPLSS AH G SVDLAI+S I
Sbjct: 12 RMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS---TVI 68
Query: 283 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 462
+ +F + + F + I+ ++
Sbjct: 69 NMRSAGITLDRFFFTFSSNFLNFSITFICMICCNYCYFITSFFTCFSSSHYYIINWPKSK 128
Query: 463 NTSFF*SCWRRRPNFISTFILIFWT 537
F+ + W P +STFILIFWT
Sbjct: 129 YFIFWPN-WSSSPYSLSTFILIFWT 152
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 369 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 476
CM C +Y TCFS S+Y IIN K KY IF
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIF 132
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 169 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 288
VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 58.4 bits (135), Expect = 2e-07
Identities = 42/114 (36%), Positives = 47/114 (41%)
Frame = +1
Query: 178 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 357
G G VYPP SS +AH +VDL IF LHLAGISS ++
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGN 170
Query: 358 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF*SCWRRRPNFISTF 519
LF A AIT+L R N SFF P TF
Sbjct: 171 FSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTF 224
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/95 (30%), Positives = 45/95 (47%)
Frame = +2
Query: 479 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXX 658
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLV 301
Query: 659 XXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
F+V HH+F GI++ + + TI I++P
Sbjct: 302 ALQSFVVWMHHMFLTGINLPIKTIFMATTIGISLP 336
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/98 (28%), Positives = 45/98 (45%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HFFD A GGD + YQ+LF F+ HP VY++ LP ++ I++ +
Sbjct: 218 HFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVATFARNRVFNYKMVVYGGI 277
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
V HH++ G+ R T++I++P
Sbjct: 278 GGIVLLSGEVWIHHLYVTGMPDWLRVGQMVTTVLISIP 315
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 372 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 476
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.4 bits (105), Expect = 8e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 514 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSY 693
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 694 IH 699
+H
Sbjct: 61 VH 62
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 494 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 673
G +++++LF +FGHPEVY+L+LPG G + +S + +
Sbjct: 255 GGALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSV 313
Query: 674 IV*AHHIFTVGI 709
+V HH F GI
Sbjct: 314 MVFLHHTFMTGI 325
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 42.7 bits (96), Expect = 0.010
Identities = 35/152 (23%), Positives = 47/152 (30%)
Frame = +3
Query: 12 HFFYRYPSSHWRLWKLXXXXXXXXXXXXIPTHQXXKLLXPTPLPYIINFKQXCRKWCRNR 191
+F Y + + KL P ++ K+L TPL Y N C K C +
Sbjct: 50 NFLYSNTYYNSGIRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHS 109
Query: 192 MNSLPPTFI*YRT*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXC 371
+NSLP Y T R +F T C
Sbjct: 110 VNSLPAPCCKYLTLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVC 169
Query: 372 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKY 467
M +YS + S+YNI K KY
Sbjct: 170 MKSNNYSCTSTSFSPSIGSSHYNITYWPKPKY 201
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 527 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 706
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYI-PIYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 707 IDIDTRAYXTSATIIIA 757
+ +D RA+ T +T+++A
Sbjct: 61 LPVDLRAWITVSTLVLA 77
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 40.7 bits (91), Expect = 0.038
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +2
Query: 683 AHHIFTVGIDIDTRAYXTSATIIIAVP 763
AHH+ TVG++ DTRAY ++ TI+IA+P
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIP 28
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.051
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 235 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 414
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 415 XXXAGAITILLTDRNLNT 468
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 39.9 bits (89), Expect = 0.067
Identities = 28/98 (28%), Positives = 38/98 (38%)
Frame = +2
Query: 470 HFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 649
HF+ G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 312 HFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGL 369
Query: 650 XXXXXXXFIV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+ HH FT D + T T +++P
Sbjct: 370 VGVSMSGAMSGVHHYFTAVSDARMPIFMT-ITETVSIP 406
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 39.9 bits (89), Expect = 0.067
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +2
Query: 692 IFTVGIDIDTRAYXTSATIIIAVP 763
++ VG+D+DTRAY T+AT+IIAVP
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVP 24
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 38.3 bits (85), Expect = 0.21
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 686 HHIFTVGIDIDTRAYXTSATIIIAVP 763
HH+FTVG+D++T + +S T+II VP
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVP 78
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 37.9 bits (84), Expect = 0.27
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +2
Query: 503 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 682
+L+ LF F+GHP VY + P FG + + I Q G + + V
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAG-RSLYSEKWARWNIYLLAIGTMGVW 282
Query: 683 AHHIFTVGIDIDTRAYXTSATIIIA 757
HH+ T + I R + +T+I+A
Sbjct: 283 VHHLQTWPLPIVLREWVNLSTLILA 307
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 35.9 bits (79), Expect = 1.1
Identities = 12/24 (50%), Positives = 21/24 (87%)
Frame = +2
Query: 692 IFTVGIDIDTRAYXTSATIIIAVP 763
++T G+++DTRA+ TS TI+I++P
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIP 24
>UniRef50_Q22LV7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 761
Score = 35.9 bits (79), Expect = 1.1
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = -3
Query: 536 VQKIKINVDIKLGLLLQQDQKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN 357
+QK + +++ L L +QQ+Q+N + KF++ +NI I+ S+NNN N+ + NK N
Sbjct: 70 LQKHREELEL-LELQIQQEQRNGLNKFQNSSNINIS-----SNNNNFNSNNNNNNGNKNN 123
Query: 356 *SNDILFNR 330
N IL R
Sbjct: 124 DKNSILEER 132
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 491 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 607
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 674 IV*AHHIFTVGIDIDTRAYXTSATIIIAVP 763
+V HH+F VG D+ T + +S T+II VP
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVP 55
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 352 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 477
DQ+ LF ++ IT AG IT+LL+DRN N FF
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFF 53
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 710 DIDTRAYXTSATIIIAVP 763
D+DTRAY TSAT+IIAVP
Sbjct: 1 DVDTRAYFTSATMIIAVP 18
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 539 PEVYILILPGFGIISHIISQERGKK 613
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 497 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 610
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
Bohadschia argus|Rep: Cytochrome oxidase subunit I -
Bohadschia argus
Length = 247
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +3
Query: 48 LWKLXXXXXXXXXXXXIPTHQXXKLLXPTPLPYIINFKQXCRKWCRNRMNSLPPTFI*YR 227
LW L IP ++ +LL L + K CRNRMN+LP
Sbjct: 28 LWNLTYTFNDSSPWYGIPPNEQNELLVSPSLFHSTPSISSSGKSCRNRMNNLPTLIQNNS 87
Query: 228 T*RKIRRSCYFFTTFS 275
R + YFF+T S
Sbjct: 88 PRRSVSSPRYFFSTSS 103
>UniRef50_Q4HP18 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 285
Score = 33.9 bits (74), Expect = 4.4
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 533 QKIKINVDIKLGLLLQQDQKNDVFKFRSVNNIVIAPAKTGSDNNN 399
++I+ ++DI G + D+K +VF ++ NI + PA + +N N
Sbjct: 241 KEIRESIDILAGFGIHYDEKKEVFYYQGNKNINVIPAVSKGENKN 285
>UniRef50_UPI000065DB35 Cluster: UPI000065DB35 related cluster; n=1;
Takifugu rubripes|Rep: UPI000065DB35 UniRef100 entry -
Takifugu rubripes
Length = 110
Score = 33.5 bits (73), Expect = 5.8
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 442 LLTDRNLNTS--FF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIW-YNFSYYFTRKRKK 612
L T R L TS + SCW ++ T ++ TS LY T W Y + +T
Sbjct: 12 LYTSRWLYTSDWLYTSCWLYTSGWLYTSYWLY-TSRWLY---TSCWLYTSHWLYTSCWLF 67
Query: 613 RNFWLFRNNLCYTSNWVIRIHCLSSS 690
++WL+ + YTS W+ H L +S
Sbjct: 68 TSYWLYTSRWLYTSCWLYTSHWLYTS 93
>UniRef50_Q54IP4 Cluster: SH2 domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: SH2 domain-containing
protein - Dictyostelium discoideum AX4
Length = 653
Score = 33.5 bits (73), Expect = 5.8
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -3
Query: 581 KLY-QILVKLKYKLQDVQKI-KINVDIKLGLLLQQDQKNDVFKFRSVNNIVIAPAKTGSD 408
KL+ + L+ LK K + +Q + + +I LL++Q Q ND + + I+ + +
Sbjct: 55 KLFTESLIDLKLKAEKIQTLERYRQEIITNLLVEQKQPNDTSIISAWEQLKISSFRINPN 114
Query: 407 NNNKNAVIPTAHTNKGN*SNDIL 339
NNN N+ + + N S+ IL
Sbjct: 115 NNNNNSNNTNSSDSNQNYSSVIL 137
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 33.1 bits (72), Expect = 7.7
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +1
Query: 103 RINXXSFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLS 216
R+N SF VE GAGTG TVYPPL+
Sbjct: 97 RMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 33.1 bits (72), Expect = 7.7
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 490 RRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIR 669
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 670 IHCLSSS 690
+ LSS+
Sbjct: 94 CNVLSSN 100
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 33.1 bits (72), Expect = 7.7
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 517 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSS 690
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 691 YIH 699
+H
Sbjct: 618 NVH 620
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 7.7
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 235 GRSVDLAIFSLHLAGISS 288
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A0DGU6 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_5,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 155
Score = 33.1 bits (72), Expect = 7.7
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = -3
Query: 566 LVKLKYKLQDVQKIKINVDIKLGLLLQQDQKNDVFKFRSVNNIVIAPAKTG 414
L +L YK+QD+QK+ + +D K L Q K DV ++ I+P++ G
Sbjct: 59 LEELNYKIQDIQKLNLQLDEKSNKLFGQ-IKQDVSNLQTAITQNISPSERG 108
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,488,685
Number of Sequences: 1657284
Number of extensions: 8638937
Number of successful extensions: 22093
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 20108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21843
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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