Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_J12
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.41 
AF117752-1|AAD38338.1|  155|Anopheles gambiae serine protease 2A...    26   1.3  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.2  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    24   3.8  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    24   5.0  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   6.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.8  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +2

Query: 155 KMAKNTSKVGKKTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLR 313
           K + N  +  KK   E     +    E  Q+G KISE++  + +  + I+ ++
Sbjct: 726 KYSMNDLETSKKNINEYDRQLEDFTRELDQIGPKISEIERRMQQRDMKIQDIK 778


>AF117752-1|AAD38338.1|  155|Anopheles gambiae serine protease 2A
           protein.
          Length = 155

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 359 LVERTVAEV-LPELISNYEQLPKAIQSLEDQLTQKGEEIN 475
           L++ TV E+ L E +  +    + I   EDQL   GE++N
Sbjct: 100 LMKGTVYEIPLDECVQRFRDAKQRISLGEDQLCALGEKVN 139


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
 Frame = +2

Query: 164 KNTSKVGKKTNEEIFAGFQTLRNEQRQLGSKIS-ELQMELNEHKIVIETLRGVELTRKCF 340
           ++  K  KK  EE  A  ++L  ++ ++ +K++  L    +E K+++E     +L  +  
Sbjct: 417 QDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKDETKVLLEEKE--KLQTELI 474

Query: 341 RMFGGVLVERTVAEVLP-EL-ISNYEQLPKAIQSLEDQLTQKGEEINKYIEEHDIRIQRA 514
            +   V   ++   +   EL I  ++++ +  + LE  L    EE  K +EE   R+Q  
Sbjct: 475 ELKRAVDESKSALSIAESELKICQHDEVTER-RKLES-LRYSYEETEKDLEEKRARLQTL 532

Query: 515 DRTMPEPPPEQSTS 556
           +  +P    E  T+
Sbjct: 533 EEALPVTRTELETA 546


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 380 QLRCVRQARPQTSGNTYGSTPLPAKSQLRSY 288
           ++RC  + RP   G TYG       +QL+ Y
Sbjct: 65  RVRCGGRKRPVHKGCTYGKPKSHGVNQLKPY 95


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -1

Query: 240 RCSLRRVWK 214
           RCSLRR+WK
Sbjct: 5   RCSLRRMWK 13


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -2

Query: 632 QYTATAI*NERISIVNR*QLAH*TW*RWIALEVVQAWCDQ 513
           Q    A   ER+ + N+       W  +  LE + AW DQ
Sbjct: 104 QNVQRAFDEERVRLTNKRAKGPFDWNDYHTLEEIHAWLDQ 143


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 422 KAIQSLEDQLTQKGEEINKYIEEHDIRIQRADRTMPEPPPEQSTSTKS 565
           KA  SLE   T   EE+ + + E + R+ R    + EP  +  T   S
Sbjct: 211 KAFYSLEKMKTDSTEELARIVNEAN-RLVRGLERLNEPVDKWDTPLTS 257



 Score = 23.0 bits (47), Expect = 8.8
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -2

Query: 383  PQLRCVRQARP-QTSGNTYGSTPLPAKSQLRSYVRLTPFVILIFYSLIDVVHYEEFGN 213
            P+ R VRQARP   SG  Y   P+  K   R  V    ++ +    +   VH E   N
Sbjct: 1412 PEQR-VRQARPFSISGVDYAG-PIMVKGTHRRAVPTKGYISIFVCFVTKAVHIELVSN 1467


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,715
Number of Sequences: 2352
Number of extensions: 11538
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)