Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_J11
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 183 6e-46
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 183 6e-46
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 183 6e-46
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 183 6e-46
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 183 6e-46
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 175 2e-43
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 175 2e-43
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 175 2e-43
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 175 2e-43
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 175 2e-43
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 175 2e-43
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 163 9e-40
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 147 4e-35
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 105 2e-22
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 100 2e-22
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 92 2e-18
M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 40 0.011
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 30 9.2
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 30 9.2
BC050444-1|AAH50444.1| 166|Homo sapiens GOLGA4 protein protein. 30 9.2
AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golg... 30 9.2
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 183 bits (446), Expect = 6e-46
Identities = 98/150 (65%), Positives = 106/150 (70%), Gaps = 10/150 (6%)
Frame = +1
Query: 175 KLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDG 354
KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMIK+DG
Sbjct: 5 KLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDG 64
Query: 355 TVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV---- 522
TVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 65 TVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
Query: 523 ---AAPKPL---EEDDEVPNLVGNFDEASK 594
APKP EEDD+VP+LV NFDEASK
Sbjct: 125 LDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 183 bits (446), Expect = 6e-46
Identities = 98/150 (65%), Positives = 106/150 (70%), Gaps = 10/150 (6%)
Frame = +1
Query: 175 KLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDG 354
KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMIK+DG
Sbjct: 5 KLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDG 64
Query: 355 TVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV---- 522
TVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 65 TVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
Query: 523 ---AAPKPL---EEDDEVPNLVGNFDEASK 594
APKP EEDD+VP+LV NFDEASK
Sbjct: 125 LDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 183 bits (446), Expect = 6e-46
Identities = 98/150 (65%), Positives = 106/150 (70%), Gaps = 10/150 (6%)
Frame = +1
Query: 175 KLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDG 354
KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMIK+DG
Sbjct: 5 KLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDG 64
Query: 355 TVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV---- 522
TVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 65 TVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
Query: 523 ---AAPKPL---EEDDEVPNLVGNFDEASK 594
APKP EEDD+VP+LV NFDEASK
Sbjct: 125 LDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 183 bits (446), Expect = 6e-46
Identities = 98/150 (65%), Positives = 106/150 (70%), Gaps = 10/150 (6%)
Frame = +1
Query: 175 KLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDG 354
KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMIK+DG
Sbjct: 5 KLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDG 64
Query: 355 TVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV---- 522
TVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 65 TVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
Query: 523 ---AAPKPL---EEDDEVPNLVGNFDEASK 594
APKP EEDD+VP+LV NFDEASK
Sbjct: 125 LDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 183 bits (446), Expect = 6e-46
Identities = 98/150 (65%), Positives = 106/150 (70%), Gaps = 10/150 (6%)
Frame = +1
Query: 175 KLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDG 354
KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMIK+DG
Sbjct: 5 KLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDG 64
Query: 355 TVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV---- 522
TVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 65 TVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
Query: 523 ---AAPKPL---EEDDEVPNLVGNFDEASK 594
APKP EEDD+VP+LV NFDEASK
Sbjct: 125 LDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 175 bits (425), Expect = 2e-43
Identities = 95/158 (60%), Positives = 103/158 (65%), Gaps = 9/158 (5%)
Frame = +1
Query: 148 LKNXXXXXXKLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 327
+K KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 328 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 507
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 508 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 594
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 175 bits (425), Expect = 2e-43
Identities = 95/158 (60%), Positives = 103/158 (65%), Gaps = 9/158 (5%)
Frame = +1
Query: 148 LKNXXXXXXKLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 327
+K KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 328 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 507
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 508 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 594
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 175 bits (425), Expect = 2e-43
Identities = 95/158 (60%), Positives = 103/158 (65%), Gaps = 9/158 (5%)
Frame = +1
Query: 148 LKNXXXXXXKLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 327
+K KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 104
Query: 328 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 507
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 105 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 164
Query: 508 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 594
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 165 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 202
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 175 bits (425), Expect = 2e-43
Identities = 95/158 (60%), Positives = 103/158 (65%), Gaps = 9/158 (5%)
Frame = +1
Query: 148 LKNXXXXXXKLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 327
+K KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 328 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 507
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 508 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 594
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 175 bits (425), Expect = 2e-43
Identities = 95/158 (60%), Positives = 103/158 (65%), Gaps = 9/158 (5%)
Frame = +1
Query: 148 LKNXXXXXXKLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 327
+K KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 328 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 507
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 508 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 594
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 175 bits (425), Expect = 2e-43
Identities = 95/158 (60%), Positives = 103/158 (65%), Gaps = 9/158 (5%)
Frame = +1
Query: 148 LKNXXXXXXKLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 327
+K KL LQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 328 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 507
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 508 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 594
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 163 bits (395), Expect = 9e-40
Identities = 87/137 (63%), Positives = 95/137 (69%), Gaps = 10/137 (7%)
Frame = +1
Query: 214 KGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 393
+GT RRKKKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QAS
Sbjct: 13 QGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQAS 72
Query: 394 LAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV-------AAPKPL---E 543
L+ANTFAITGH E K TEMLPGILSQLG D L L+++A APKP E
Sbjct: 73 LSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDE 132
Query: 544 EDDEVPNLVGNFDEASK 594
EDD+VP+LV NFDEASK
Sbjct: 133 EDDDVPDLVENFDEASK 149
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 147 bits (357), Expect = 4e-35
Identities = 79/147 (53%), Positives = 90/147 (61%)
Frame = +1
Query: 145 TLKNXXXXXXKLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGI 324
T ++ KL LQ+QVRIGGKGT RKKKV H TA DD VN I GI
Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGI 89
Query: 325 EEVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLK 504
E+VNM GTVIHFNNPK QASLA NTF ITGH E KQ TEMLP +LSQLG D L L+
Sbjct: 90 EKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLR 149
Query: 505 RIASSVAAPKPLEEDDEVPNLVGNFDE 585
R+A V +P+ D + P G D+
Sbjct: 150 RLA-EVLPKQPV--DGKAPLATGGDDD 173
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 105 bits (253), Expect = 2e-22
Identities = 57/97 (58%), Positives = 62/97 (63%)
Frame = +1
Query: 175 KLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDG 354
KL Q++V G KGT RKK VVH TA +D VN IPGIEEVNM G
Sbjct: 9 KLTKRQAEVHTGRKGTAHRKK-VVHTTA--EDKKFQFSLKKLGVNNIPGIEEVNMFTHQG 65
Query: 355 TVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGI 465
TVIHFNNP+ QASLAANTF +TGH E KQ TEML I
Sbjct: 66 TVIHFNNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 100 bits (239), Expect(2) = 2e-22
Identities = 56/95 (58%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
Frame = +1
Query: 328 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 507
+VNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 126
Query: 508 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 585
+A SV PL ++DDEVP G F E
Sbjct: 127 LAEALPKQSVDGKAPLATGEDDDDEVP---GGFQE 158
Score = 25.8 bits (54), Expect(2) = 2e-22
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 148 LKNXXXXXXKLKXLQSQVRIGGK 216
+K KL LQ+QVRIGGK
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 92.3 bits (219), Expect = 2e-18
Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 10/98 (10%)
Frame = +1
Query: 331 VNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRI 510
+N K T+IHFNNP+ QA LA NTF ITGHGE KQ TEML +L+QL L L+R+
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHGETKQLTEMLRSVLNQLAAVSLTSLRRL 60
Query: 511 A-----SSVAAPKPL-----EEDDEVPNLVGNFDEASK 594
A SV PL ++DDEVP ++ NFDEASK
Sbjct: 61 AEALPKQSVDGKAPLATGEDDDDDEVPGIMENFDEASK 98
>M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein.
Length = 67
Score = 39.9 bits (89), Expect = 0.011
Identities = 27/72 (37%), Positives = 34/72 (47%)
Frame = +1
Query: 148 LKNXXXXXXKLKXLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 327
+K KL LQ++V IGG +KKVVH TA +D ++ GIE
Sbjct: 1 MKETIMNQEKLAKLQAKVPIGGTA---HRKKVVHRTATANDKKRQFSLKKLEIS---GIE 54
Query: 328 EVNMIKEDGTVI 363
EVNM TVI
Sbjct: 55 EVNMFTNQATVI 66
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 484 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 597
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 484 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 597
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>BC050444-1|AAH50444.1| 166|Homo sapiens GOLGA4 protein protein.
Length = 166
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 484 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 597
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golgin
subfamily a, 4 variant protein.
Length = 1310
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 484 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 597
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 131 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,780,937
Number of Sequences: 237096
Number of extensions: 2065492
Number of successful extensions: 10105
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10090
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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