Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_J09
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -3

Query: 498 YIPIRFLWRVF*LDACFQFFLSSYFQLCVFVFYANLLL 385
           Y  I F   +  L   + F +  +F LC++ FY   ++
Sbjct: 118 YAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 444 FFLSSYFQLCVFVFYANLLL 385
           F +   F LC++ FY  L++
Sbjct: 275 FTMHLLFLLCIYYFYCALII 294


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 140 LKFWVLWVLNNRMGLPR 190
           LKFW +W      GL +
Sbjct: 409 LKFWFMWKAKGTSGLEK 425


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 119 QLVANGPLKFWVLWVLNNRMGLPRASATYDV 211
           Q  A G     +LW +NN+   P+    Y +
Sbjct: 817 QCEAKGEKPIGILWNINNKRLEPKGDNRYTI 847


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 443 SFYLLISNFVYSFFT 399
           SFY  IS F Y F T
Sbjct: 238 SFYFFISTFFYFFTT 252


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 443 SFYLLISNFVYSFFT 399
           SFY  IS F Y F T
Sbjct: 234 SFYFFISTFFYFFTT 248


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 150 QNFRGPFATSCFAFRVANHWR 88
           ++F+ P+  SC+A   A  WR
Sbjct: 383 ESFKSPYKASCWAQFKAVLWR 403


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 150 QNFRGPFATSCFAFRVANHWR 88
           ++F+ P+  SC+A   A  WR
Sbjct: 383 ESFKSPYKASCWAQFKAVLWR 403


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 357 SPLNEETDMAGEDWRK 404
           +PLNE+ D+  +++RK
Sbjct: 73  TPLNEQFDVIKDNYRK 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,842
Number of Sequences: 336
Number of extensions: 3256
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)