Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_J02
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   7.1  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 523 ESGSGKTQLVLYTSIHNL 576
           ++GSGKT   +   IHNL
Sbjct: 203 QTGSGKTAAFMLPIIHNL 220


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/57 (22%), Positives = 27/57 (47%)
 Frame = +3

Query: 36  LMLFLHVLFCKYY*IYLHM*FVIWFAFNNSAGQFIMNI*RLIVSLSFIILRFVLIHI 206
           ++  +H L C YY  Y  +  +  + F  +   F +++  L+    F++  F L+ I
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCI 146



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +3

Query: 24  VAL*LMLFLHVLFCKYY*IYLHM*FVIWFAFNNSAGQFIMNI*RLIVSLSFI 179
           V L  +L ++  FC +    +H+ F   F F N    F++ +    + L F+
Sbjct: 158 VHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFL 209



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 48  LHVLFCKYY*IYLHM*FVIWF 110
           L +L C YY  Y+H+ F   F
Sbjct: 252 LLLLVCIYYFYYMHLLFCCAF 272


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 682 HFYHSLDLCSLLNSLFD*IF*LETNPQCKCIQNI 581
           HF+ +L L S L S F  I  L    QC  +Q I
Sbjct: 90  HFFGTLKLWSQLFSTFAGIEVLHVVKQCYHLQKI 123


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 96  ITCVGIFSNIYKTTHGEITLIKVPPTYLC 10
           + C      IY+  +G+ T + V PT LC
Sbjct: 23  VVCYFTSWTIYRPDNGKFTALDVDPT-LC 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,594
Number of Sequences: 336
Number of extensions: 3630
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)