Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_J02
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0023 - 434250-434408,435614-435684,436053-436143,436208-43... 48 7e-06
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 48 9e-06
12_02_0419 + 18916995-18917090,18917703-18917851,18917873-189180... 46 2e-05
12_01_0287 - 2152179-2152424,2153300-2153339,2153612-2153831,215... 46 2e-05
02_04_0256 + 21331396-21332268 45 5e-05
01_07_0154 - 41532220-41533252,41533786-41533971,41534759-415350... 42 5e-04
05_01_0163 - 1125364-1125422,1126062-1126205,1126640-1126756,112... 41 8e-04
03_05_0444 + 24396375-24396584,24396968-24397021,24397426-243975... 39 0.004
04_01_0404 - 5297341-5297970,5298304-5299179 37 0.013
11_03_0176 - 11260900-11261286,11261459-11261593,11262971-112631... 36 0.040
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 35 0.069
01_06_1692 - 39232475-39232867,39233176-39233310,39233770-392339... 35 0.069
04_03_0313 + 14233049-14234362,14234558-14235523 31 0.64
07_01_1106 - 10187609-10190041,10190292-10191932 30 1.5
06_01_1090 - 8945909-8946125,8946607-8947562,8947733-8949835 30 1.5
09_04_0688 + 19475847-19477034,19477133-19477384,19477778-194778... 30 2.0
02_01_0406 - 2958933-2962076 30 2.0
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 29 2.6
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 29 3.4
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 29 3.4
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 3.4
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 29 3.4
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 29 3.4
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 4.5
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 29 4.5
06_03_0881 - 25623679-25623843,25624104-25624195,25624287-256244... 29 4.5
04_01_0411 + 5449769-5450662,5450753-5451382 29 4.5
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 29 4.5
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 4.5
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 4.5
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 4.5
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 4.5
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 28 6.0
02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642... 28 6.0
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 28 6.0
01_01_0270 - 2225250-2225263,2225549-2225732,2225817-2225972,222... 28 6.0
08_01_0645 - 5578162-5578810,5580205-5580353 28 7.9
01_01_0660 + 5029070-5029177,5029303-5029398,5029494-5029556,502... 28 7.9
01_01_0268 - 2214923-2215048,2215131-2215286,2215371-2215469,221... 28 7.9
>09_01_0023 -
434250-434408,435614-435684,436053-436143,436208-436321,
436523-436657,436832-436913,437095-437195,437425-437490
Length = 272
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIHNLPK---CSVYICTEDLF 615
+ TG +D +LGGG R G + EI G+S SGKTQ+ L ++ H + +Y+ T + F
Sbjct: 50 LPTGLQGVDALLGGGLRQGQLTEITGQSSSGKTQVCLCSASHVAARQLGVVMYLDTSNSF 109
Query: 616 PAKRFNQIMN 645
R +I++
Sbjct: 110 SPSRIARIVD 119
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 47.6 bits (108), Expect = 9e-06
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 280 AGISSTKEIMILSILDIKRLTRMHSKDIQLVKNIVSDHISAKSFTCRELLVKN---CKIS 450
AGI + +M+ + + + + + + +S T +LL+K +I+
Sbjct: 50 AGIYTCNGLMMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRIT 109
Query: 451 TGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
TG +D++LGGG T I E FGE SGKTQL
Sbjct: 110 TGSQALDELLGGGIETLCITEAFGEFRSGKTQL 142
>12_02_0419 +
18916995-18917090,18917703-18917851,18917873-18918063,
18918178-18918269,18918456-18918550,18918920-18919049,
18919178-18919219
Length = 264
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
+++TG ++D IL GG TG+I EI+GE SGKTQL
Sbjct: 132 QVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQL 167
>12_01_0287 -
2152179-2152424,2153300-2153339,2153612-2153831,
2153917-2153995,2154087-2154155,2154237-2154329,
2154411-2154477,2154579-2154640,2154729-2154774,
2155359-2155404,2155490-2155547,2155717-2155755,
2155849-2155920,2156067-2156158,2157036-2157135
Length = 442
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +1
Query: 280 AGISSTKEIMILSILDIKRLTRMHSKDIQLVKNIVSDHISAKSFTCRELLVKN---CKIS 450
AGI + +M+ + + + + + + +S T +LL+K +I+
Sbjct: 50 AGIYTCNGLMMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFITGSDLLIKRKSVVRIT 109
Query: 451 TGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
TG +D +LGGG T I E FGE SGKTQL
Sbjct: 110 TGSQALDKLLGGGIETLCITEAFGEFRSGKTQL 142
>02_04_0256 + 21331396-21332268
Length = 290
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI 567
K+S GC +D +L GG ++ EI GES SGKTQL L ++
Sbjct: 42 KLSLGCPVLDRLLSGGLPPASVTEIAGESASGKTQLCLQLAL 83
>01_07_0154 -
41532220-41533252,41533786-41533971,41534759-41535039,
41535184-41535318,41535427-41535573,41535841-41536010,
41536110-41536197,41536999-41537219,41537725-41537810,
41537916-41537962
Length = 797
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 445 ISTGCSKIDDILG-GGFRTGTINEIFGESGSGKTQLVLYTSIHNLPK--CSVYICTEDLF 615
ISTG K+D LG GG G + E+FG+ SGKT L L+ K C YI E+ F
Sbjct: 100 ISTGSLKLDIALGIGGLPKGRMVELFGKEASGKTTLALHVVKEAQKKGGCCAYIDAENAF 159
>05_01_0163 -
1125364-1125422,1126062-1126205,1126640-1126756,
1126835-1126926,1127942-1128022,1128323-1128378,
1128496-1128559,1128645-1128748,1129578-1129724,
1129876-1129989,1130070-1130153
Length = 353
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS-IHNLPKC-------SVYI 597
+++T +D+ L GG G + E+ G SG GKTQ L + + LP+C +YI
Sbjct: 81 RLATTLRGLDEALHGGIPAGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVLYI 140
Query: 598 CTEDLFPAKRFNQI 639
TE F ++R +I
Sbjct: 141 DTESKFSSRRMIEI 154
>03_05_0444 +
24396375-24396584,24396968-24397021,24397426-24397517,
24397610-24397685,24397838-24397900,24398002-24398094,
24398694-24398819,24398895-24398999,24399071-24399127,
24399149-24399274,24399348-24399424,24400312-24400384,
24400430-24400492
Length = 404
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 451 TGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLY 558
+GC +D LGGG G + E++G SGKT L L+
Sbjct: 124 SGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALH 159
>04_01_0404 - 5297341-5297970,5298304-5299179
Length = 501
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +1
Query: 427 LVKNCKISTGCSK---IDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIHNLPKCSVYI 597
LV+N + + G K + +L T T FG++ G+ Q T++ K S
Sbjct: 158 LVRNIEAAAGGKKPFTLATLLISCTNTFTAKAAFGQACGGELQEQFLTALDEALKFSNGF 217
Query: 598 CTEDLFPAKRFNQIMNSIKSR 660
C DLFP+ RF M ++SR
Sbjct: 218 CFGDLFPSLRFIDAMTGLRSR 238
>11_03_0176 -
11260900-11261286,11261459-11261593,11262971-11263117,
11263754-11263926,11264661-11264748,11265587-11265804,
11266367-11266424,11267133-11267219
Length = 430
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 445 ISTGCSKIDDILG-GGFRTGTINEIFGESGSGKTQLVLY 558
ISTG +D LG GG G + EI+G SGKT L L+
Sbjct: 103 ISTGSFALDMALGIGGLPKGRVVEIYGPEASGKTTLALH 141
>11_06_0395 +
23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 34.7 bits (76), Expect = 0.069
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1
Query: 484 GGFRTGTINEIFGESGSGKTQL 549
GG TG+I EI+GE SGKTQL
Sbjct: 95 GGIETGSITEIYGEFRSGKTQL 116
>01_06_1692 -
39232475-39232867,39233176-39233310,39233770-39233916,
39234131-39234303,39235201-39235288,39235508-39235725,
39235968-39236025,39236259-39236315,39237022-39237099
Length = 448
Score = 34.7 bits (76), Expect = 0.069
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 445 ISTGCSKIDDILG-GGFRTGTINEIFGESGSGKTQLVLY 558
+STG +D LG GG G + E++G SGKT L L+
Sbjct: 119 VSTGSFSLDLALGTGGLPKGRVIEVYGPEASGKTTLALH 157
>04_03_0313 + 14233049-14234362,14234558-14235523
Length = 759
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +1
Query: 502 TINEIFGESGSGKTQLVLY----TSIHNLPKCSVYICTEDLFPAKR-FNQIMNSIKSRD 663
+I IFG G GKT L Y + + + ++C DLF KR +I SI +D
Sbjct: 244 SILPIFGIGGVGKTTLAQYIYNDERVRSHFRMRTWVCVSDLFDKKRIIEEIFKSITKKD 302
>07_01_1106 - 10187609-10190041,10190292-10191932
Length = 1357
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 376 NIVSDHISAKSFTCRELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLV 552
N V + KS+ C + + N +S G + DI T IFGE G+GKT+L+
Sbjct: 538 NWVHTQCNLKSYRCHQQRIINSLLSDGSDE-GDITSEQSLTSIC--IFGERGTGKTELL 593
>06_01_1090 - 8945909-8946125,8946607-8947562,8947733-8949835
Length = 1091
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = +1
Query: 514 IFGESGSGKTQLVLYTSIHNLPKCS-------VYICTEDLFPAKRF-NQIMNSIKSRD 663
IFG G GKT L + I+N P+ V++C DLF KR N+I+ S +
Sbjct: 248 IFGIGGVGKTTLAQF--IYNDPRVQAHFGNRRVWVCVSDLFDKKRVTNEIIESFNREE 303
>09_04_0688 +
19475847-19477034,19477133-19477384,19477778-19477858,
19477907-19478072,19479009-19479445,19479781-19479837
Length = 726
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Frame = +1
Query: 409 FTCRELLV---KNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIHNLP 579
+T ELL+ K C+ C+ IDD GG + T + + L TS N
Sbjct: 551 YTIHELLISGCKGCRPGQNCNLIDDSEKGGRKNMTCCSMECDIRESNDSSSLETS-ENGS 609
Query: 580 KCSVYICTEDLFPAKRFNQIMNSIKSRD 663
+V C D FP S K D
Sbjct: 610 STNVCCCQSDTFPLGEKKYCCRSSKIND 637
>02_01_0406 - 2958933-2962076
Length = 1047
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = -3
Query: 362 MSLLCILVSLFISKIDNIIISLVLDIPALSIASNKFNGKI 243
+ +L I +LF + + I ++ ++ AL+++SNKF GKI
Sbjct: 154 LQVLNISSNLFTGQFPSSIWDVMKNLVALNVSSNKFTGKI 193
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
L G FR G + + G SG+GKT L+
Sbjct: 697 LSGSFRPGVLTALMGISGAGKTTLL 721
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 800 ISGSFRQGVLTALMGVSGAGKTTLL 824
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 820 ISGSFRPGVLTALMGVSGAGKTTLL 844
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 775 ISGSFRPGVLTALMGVSGAGKTTLM 799
>05_03_0359 - 12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 328 IKRLTRMHSKDIQLVKNIVSDHISAKSFT 414
I+RL HSKD+Q V +IV H S ++ T
Sbjct: 1113 IERLRLQHSKDLQKVVDIVLSHQSVRNKT 1141
>01_06_0556 + 30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 939 ISGAFRPGVLTALMGVSGAGKTTLM 963
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 922 VSGSFRPGVLTALMGVSGAGKTTLM 946
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 883 ISGAFRPGVLTALVGVSGAGKTTLM 907
>06_03_0881 -
25623679-25623843,25624104-25624195,25624287-25624446,
25624586-25624668,25624845-25624913,25625480-25625555,
25625645-25625895,25626387-25626537
Length = 348
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVL 555
+S+G +D ILGGGF G++ I +S + L+L
Sbjct: 42 VSSGIPDLDRILGGGFLIGSVVMIMEDSDAPHHLLLL 78
>04_01_0411 + 5449769-5450662,5450753-5451382
Length = 507
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 496 TGTINEIFGESGSGKTQLVLYTSIHNLPKCSVYICTEDLFPAKRFNQIMNSIKSR 660
T T FG++ + Q T++ K S C DLFP+ RF M ++SR
Sbjct: 190 TITAKAAFGQACGVELQEQFLTALDVGLKFSGGFCFGDLFPSLRFIDAMTGLRSR 244
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 877 VSGAFRPGVLTALMGVSGAGKTTLM 901
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 876 VSGSFRPGVLTALMGVSGAGKTTLM 900
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 891 VSGSFRPGVLTALMGVSGAGKTTLM 915
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 898 VSGSFRPGVLTALMGVSGAGKTTLM 922
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 921 VSGSFRPGVLTALMGVSGAGKTTLM 945
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 433 KNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLV 552
K+ + C I +GG G I + G SGSGKT L+
Sbjct: 79 KSTEDQGSCKHILKGIGGSVDPGEILALMGPSGSGKTTLL 118
>02_02_0654 -
12662931-12663200,12663296-12663550,12664097-12664268,
12664354-12664581,12664727-12664860,12665018-12665101,
12665332-12665538,12665641-12665973,12666175-12666281,
12666439-12666593,12666778-12666810,12666924-12666972,
12667152-12667312,12667413-12668313,12668391-12668481,
12668558-12668749
Length = 1123
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 581 ISGAFRPGLLTALVGVSGAGKTTLM 605
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 478 LGGGFRTGTINEIFGESGSGKTQLV 552
+ G FR G + + G SG+GKT L+
Sbjct: 1126 VSGAFRPGVLTALMGFSGAGKTTLM 1150
>01_01_0270 -
2225250-2225263,2225549-2225732,2225817-2225972,
2226276-2226374,2226489-2226563,2226682-2226750,
2226917-2227115,2227492-2227597,2228118-2228526
Length = 436
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 497 REQSMRYLVKVVQEKLN*SFIPQYIIYLNVLYTFALRICFQLKDLIK 637
+EQ++ Y+ + VQE +++ + +Y+N L F + ++ IK
Sbjct: 6 KEQAIEYVKQAVQEDNGGNYVKAFPLYMNALEYFKTHLKYEKDPKIK 52
>08_01_0645 - 5578162-5578810,5580205-5580353
Length = 265
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +2
Query: 131 SVYNEYLKA---NC-FLEFYNIAFCFNSYNTDTLKKTC 232
++ NE L+A NC LE +I CFN + DTL+ C
Sbjct: 147 TITNEGLEAILDNCPHLESLDIRHCFNVFMDDTLRAKC 184
>01_01_0660 +
5029070-5029177,5029303-5029398,5029494-5029556,
5029836-5029913,5030446-5030614,5030797-5031180,
5031959-5032042,5032143-5032288,5032810-5033070,
5033147-5033328,5033421-5033586,5033650-5033703,
5034702-5034965,5035088-5035303,5035388-5035540,
5035630-5035827
Length = 873
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -3
Query: 494 RNPPPNISSILEQPVLILQ 438
R+PPPNI+ +LE+ L+L+
Sbjct: 814 RHPPPNIAGVLERACLMLR 832
>01_01_0268 -
2214923-2215048,2215131-2215286,2215371-2215469,
2215557-2215631,2215732-2215800,2216515-2216713,
2220162-2220267,2221117-2221588
Length = 433
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 497 REQSMRYLVKVVQEKLN*SFIPQYIIYLNVLYTFALRICFQLKDLIK 637
+EQ++ Y+ + VQE +++ + +Y+N L F + ++ IK
Sbjct: 6 KEQAIEYVKQAVQEDNAGNYVKAFPLYMNALEYFKTHLKYEKNPKIK 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,657,396
Number of Sequences: 37544
Number of extensions: 300148
Number of successful extensions: 814
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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