Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_J02
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complement... 73 1e-12
BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complement... 73 1e-12
BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complement... 73 1e-12
AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complement... 73 1e-12
AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein. 73 1e-12
AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair cross-comp... 73 1e-12
Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein. 48 3e-05
BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 48 3e-05
AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 48 3e-05
AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein. 48 3e-05
BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S. cer... 45 3e-04
AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S. cer... 45 3e-04
AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein. 45 3e-04
D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein. 44 5e-04
D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein. 44 5e-04
CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein. 44 5e-04
BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA hom... 44 5e-04
AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA hom... 44 5e-04
AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein. 44 5e-04
AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein. 44 5e-04
AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein. 41 0.005
D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein. 40 0.006
D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein. 40 0.006
CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein. 40 0.006
BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor ... 40 0.006
BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor ... 40 0.006
BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein. 40 0.006
AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor ... 40 0.006
AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor ... 40 0.006
AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein. 40 0.006
BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S. cer... 40 0.011
BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein. 40 0.011
BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein. 40 0.011
BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein. 40 0.011
AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protei... 40 0.011
AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens ... 33 1.3
>BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 72.9 bits (171), Expect = 1e-12
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Frame = +1
Query: 244 ILPLN--LFEAIDRAGISSTKEIMILSILDIKRLTRMHSKDIQLVKNIVSDHISAKSF-T 414
+L LN + AI +A + S KE++ S D+KRLT + S ++ + S H+ S T
Sbjct: 5 LLDLNPRIIAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILT 64
Query: 415 CRELL-------VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-- 567
+L ++ ++S GC +D +L GG I E+ G S +GKTQL L +
Sbjct: 65 ALQLHQQKERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAV 124
Query: 568 -----H-NLPKCSVYICTEDLFPAKRFNQIM 642
H L +VYICTED FP KR Q+M
Sbjct: 125 QFPRQHGGLEAGAVYICTEDAFPHKRLQQLM 155
>BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 72.9 bits (171), Expect = 1e-12
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Frame = +1
Query: 244 ILPLN--LFEAIDRAGISSTKEIMILSILDIKRLTRMHSKDIQLVKNIVSDHISAKSF-T 414
+L LN + AI +A + S KE++ S D+KRLT + S ++ + S H+ S T
Sbjct: 5 LLDLNPRIIAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILT 64
Query: 415 CRELL-------VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-- 567
+L ++ ++S GC +D +L GG I E+ G S +GKTQL L +
Sbjct: 65 ALQLHQQKERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAV 124
Query: 568 -----H-NLPKCSVYICTEDLFPAKRFNQIM 642
H L +VYICTED FP KR Q+M
Sbjct: 125 QFPRQHGGLEAGAVYICTEDAFPHKRLQQLM 155
>BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 72.9 bits (171), Expect = 1e-12
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Frame = +1
Query: 244 ILPLN--LFEAIDRAGISSTKEIMILSILDIKRLTRMHSKDIQLVKNIVSDHISAKSF-T 414
+L LN + AI +A + S KE++ S D+KRLT + S ++ + S H+ S T
Sbjct: 5 LLDLNPRIIAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILT 64
Query: 415 CRELL-------VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-- 567
+L ++ ++S GC +D +L GG I E+ G S +GKTQL L +
Sbjct: 65 ALQLHQQKERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAV 124
Query: 568 -----H-NLPKCSVYICTEDLFPAKRFNQIM 642
H L +VYICTED FP KR Q+M
Sbjct: 125 QFPRQHGGLEAGAVYICTEDAFPHKRLQQLM 155
>AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 72.9 bits (171), Expect = 1e-12
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Frame = +1
Query: 244 ILPLN--LFEAIDRAGISSTKEIMILSILDIKRLTRMHSKDIQLVKNIVSDHISAKSF-T 414
+L LN + AI +A + S KE++ S D+KRLT + S ++ + S H+ S T
Sbjct: 5 LLDLNPRIIAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILT 64
Query: 415 CRELL-------VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-- 567
+L ++ ++S GC +D +L GG I E+ G S +GKTQL L +
Sbjct: 65 ALQLHQQKERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAV 124
Query: 568 -----H-NLPKCSVYICTEDLFPAKRFNQIM 642
H L +VYICTED FP KR Q+M
Sbjct: 125 QFPRQHGGLEAGAVYICTEDAFPHKRLQQLM 155
>AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein.
Length = 346
Score = 72.9 bits (171), Expect = 1e-12
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Frame = +1
Query: 244 ILPLN--LFEAIDRAGISSTKEIMILSILDIKRLTRMHSKDIQLVKNIVSDHISAKSF-T 414
+L LN + AI +A + S KE++ S D+KRLT + S ++ + S H+ S T
Sbjct: 5 LLDLNPRIIAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILT 64
Query: 415 CRELL-------VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-- 567
+L ++ ++S GC +D +L GG I E+ G S +GKTQL L +
Sbjct: 65 ALQLHQQKERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAV 124
Query: 568 -----H-NLPKCSVYICTEDLFPAKRFNQIM 642
H L +VYICTED FP KR Q+M
Sbjct: 125 QFPRQHGGLEAGAVYICTEDAFPHKRLQQLM 155
>AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair
cross-complementing protein 3 protein.
Length = 346
Score = 72.9 bits (171), Expect = 1e-12
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Frame = +1
Query: 244 ILPLN--LFEAIDRAGISSTKEIMILSILDIKRLTRMHSKDIQLVKNIVSDHISAKSF-T 414
+L LN + AI +A + S KE++ S D+KRLT + S ++ + S H+ S T
Sbjct: 5 LLDLNPRIIAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILT 64
Query: 415 CRELL-------VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-- 567
+L ++ ++S GC +D +L GG I E+ G S +GKTQL L +
Sbjct: 65 ALQLHQQKERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAV 124
Query: 568 -----H-NLPKCSVYICTEDLFPAKRFNQIM 642
H L +VYICTED FP KR Q+M
Sbjct: 125 QFPRQHGGLEAGAVYICTEDAFPHKRLQQLM 155
>Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein.
Length = 328
Score = 48.0 bits (109), Expect = 3e-05
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 421 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 591
EL +STG +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 74 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 133
Query: 592 YICTEDLFPAKRFNQIMNSIKSRDQD 669
Y+ + A R Q++ + K++D++
Sbjct: 134 YVDSNGGLTASRLLQLLQA-KTQDEE 158
>BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 48.0 bits (109), Expect = 3e-05
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 421 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 591
EL +STG +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 74 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 133
Query: 592 YICTEDLFPAKRFNQIMNSIKSRDQD 669
Y+ + A R Q++ + K++D++
Sbjct: 134 YVDSNGGLTASRLLQLLQA-KTQDEE 158
>AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 48.0 bits (109), Expect = 3e-05
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 421 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 591
EL +STG +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 74 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 133
Query: 592 YICTEDLFPAKRFNQIMNSIKSRDQD 669
Y+ + A R Q++ + K++D++
Sbjct: 134 YVDSNGGLTASRLLQLLQA-KTQDEE 158
>AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein.
Length = 328
Score = 48.0 bits (109), Expect = 3e-05
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 421 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 591
EL +STG +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 74 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 133
Query: 592 YICTEDLFPAKRFNQIMNSIKSRDQD 669
Y+ + A R Q++ + K++D++
Sbjct: 134 YVDSNGGLTASRLLQLLQA-KTQDEE 158
>BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 44.8 bits (101), Expect = 3e-04
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 397 SAKSFTCRELLVKNCK---ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI 567
S K T ELL + I T CS +DDILGGG EI G G GKTQL + ++
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAV 140
Query: 568 H-NLPKCSVYICTEDLF 615
+P+C + E +F
Sbjct: 141 DVQIPECFGGVAGEAVF 157
>AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 44.8 bits (101), Expect = 3e-04
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 397 SAKSFTCRELLVKNCK---ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI 567
S K T ELL + I T CS +DDILGGG EI G G GKTQL + ++
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAV 140
Query: 568 H-NLPKCSVYICTEDLF 615
+P+C + E +F
Sbjct: 141 DVQIPECFGGVAGEAVF 157
>AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein.
Length = 376
Score = 44.8 bits (101), Expect = 3e-04
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 397 SAKSFTCRELLVKNCK---ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI 567
S K T ELL + I T CS +DDILGGG EI G G GKTQL + ++
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAV 140
Query: 568 H-NLPKCSVYICTEDLF 615
+P+C + E +F
Sbjct: 141 DVQIPECFGGVAGEAVF 157
>D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
+I+TG ++D +L GG TG+I E+FGE +GKTQ+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQI 136
>D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein.
Length = 339
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
+I+TG ++D +L GG TG+I E+FGE +GKTQ+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQI 136
>CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
+I+TG ++D +L GG TG+I E+FGE +GKTQ+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQI 136
>BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
+I+TG ++D +L GG TG+I E+FGE +GKTQ+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQI 136
>AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
+I+TG ++D +L GG TG+I E+FGE +GKTQ+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQI 136
>AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
+I+TG ++D +L GG TG+I E+FGE +GKTQ+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQI 136
>AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein.
Length = 339
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 442 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
+I+TG ++D +L GG TG+I E+FGE +GKTQ+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQI 136
>AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein.
Length = 95
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 421 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQ 546
EL +STG +D +L G TG + EI G GSGKTQ
Sbjct: 41 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQ 82
>D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein.
Length = 340
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein.
Length = 340
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein.
Length = 340
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein.
Length = 165
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 445 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein.
Length = 289
Score = 40.3 bits (90), Expect = 0.006
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 421 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 591
E + + C +S +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 37 EEVAQKCGLSY--KXLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 94
Query: 592 YICTEDLFPAKRFNQIMNSIKSRDQD 669
Y+ + A R Q++ + K++D++
Sbjct: 95 YVDSNGGLTASRLLQLLQA-KTQDEE 119
>BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.011
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 397 SAKSFTCRELLVKNCK---ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
S K T ELL + I T CS +DDILGGG EI G G GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.011
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 397 SAKSFTCRELLVKNCK---ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
S K T ELL + I T CS +DDILGGG EI G G GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.011
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 397 SAKSFTCRELLVKNCK---ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
S K T ELL + I T CS +DDILGGG EI G G GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.011
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 397 SAKSFTCRELLVKNCK---ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
S K T ELL + I T CS +DDILGGG EI G G GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protein
protein.
Length = 135
Score = 39.5 bits (88), Expect = 0.011
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 397 SAKSFTCRELLVKNCK---ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 549
S K T ELL + I T CS +DDILGGG EI G G GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ16262 fis, clone IMR322008651, highly similar
to DNA REPAIR PROTEIN RAD51. ).
Length = 340
Score = 32.7 bits (71), Expect = 1.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 484 GGFRTGTINEIFGESGSGKTQL 549
GG TG+I E+FGE +GKTQ+
Sbjct: 116 GGIETGSITEMFGEFRTGKTQI 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,945,773
Number of Sequences: 237096
Number of extensions: 1720126
Number of successful extensions: 3370
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3358
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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