Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_J01
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.59 
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              25   1.0  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              25   1.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   4.2  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    23   4.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.6  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 113 KNKIKQRAINANITKPFHERLRNV 42
           KN I+Q++  +++T PF    RN+
Sbjct: 539 KNTIEQKSTKSSVTIPFERTFRNL 562


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = +1

Query: 532 YDLEDQRLKKLCSLVMRLFKLVDMSG 609
           +D+ED++ ++    +++ F +VD SG
Sbjct: 52  FDVEDEKPQRYNECILKQFNIVDESG 77


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = +1

Query: 532 YDLEDQRLKKLCSLVMRLFKLVDMSG 609
           +D+ED++ ++    +++ F +VD SG
Sbjct: 52  FDVEDEKPQRYNECILKQFNIVDESG 77


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 154 PGPTPLPIVGNLLSV 198
           PGP  LP++GN L +
Sbjct: 45  PGPPALPLIGNALDL 59


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 371 PSGLPSNTSRFETSLMSSIPVT 306
           P  +  ++S+FE  LM+ +P T
Sbjct: 62  PGHINCDSSKFEEDLMNKLPTT 83


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -2

Query: 717 YFP*ILVKSVMYFLKFSKPDKPWYKMSQEW 628
           Y+  IL  ++ YF    + + PW   +  W
Sbjct: 76  YYIVILAWAIFYFFMSMRSELPWGSCNNYW 105


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 492 CNVEHLIDQDRLSSIGQTQLYEGFTFFAQFLS 397
           CN+ H+I  D     G+  + E +  F++  S
Sbjct: 274 CNLGHMISYDDTDGDGKLNVNEFYMAFSKLYS 305


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 688 NALHQYLREIIKEHQXNLQLGAPKDV 765
           NA + Y+RE++     + Q   PK++
Sbjct: 231 NAYYYYMREMLPYWMSSSQYHMPKEI 256


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 688 NALHQYLREIIKEHQXNLQLGAPKDV 765
           NA + Y+RE++     + Q   PK++
Sbjct: 231 NAYYYYMREMLPYWMSSSQYHMPKEI 256


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,932
Number of Sequences: 438
Number of extensions: 6116
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)