Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I24
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.7  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
 Frame = +3

Query: 204 EHAQNQTVLSTPQWTVQMR-----YYSSLPSHIKV------NLPALSPTMESGSIVSWEK 350
           E+ + + ++ST + T+        Y+S L S+ K+      N P L+P ++  S+   ++
Sbjct: 17  ENPETELLVSTKRSTISQGCKACGYHSPLESNHKLVTFILKNPPNLNPAVQGSSLTEGKR 76

Query: 351 KEGDKLSEGD 380
            +  K   GD
Sbjct: 77  SKRSKRPNGD 86


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +3

Query: 237 PQWTVQMRYYSSLPSHIKVNLPALS---PTMESGSIVSWEKKEG 359
           PQWT Q         HIK  +P +S    +M  GS   W +  G
Sbjct: 54  PQWTWQCINQRCERRHIKGAIPVVSLSTCSMLCGSTQLWPQPTG 97


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 183 KVTNKLLEHAQNQTVLSTPQWTVQMRYYSSL 275
           K  NKL  H    T+L+   WT+   Y+ ++
Sbjct: 226 KKINKLYGHQLLLTILTYLIWTIYEMYHLAI 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,460
Number of Sequences: 336
Number of extensions: 3052
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)