Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I24
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    27   0.48 
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   3.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.8  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    23   7.8  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 329 TTLHGWRKSWKVDLYM*W*TRIIPHLN 249
           TT+  W++ W   ++  W  R+IP +N
Sbjct: 849 TTMERWQREWDESVHGRWTYRLIPDVN 875


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 294 NLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDK 407
           ++ A+  T +  + V W+K  G+ L    +  +I TDK
Sbjct: 81  DIAAIGITNQRETTVVWDKNTGEPLYNAIVWNDIRTDK 118


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 314 WRKSWKVDLY 285
           WRKSW V +Y
Sbjct: 597 WRKSWMVPIY 606


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = -3

Query: 283 CDGRL--E*YLI*TVHCGVDRTVW 218
           C G L  E Y+I   HC VD+  W
Sbjct: 137 CGGALISERYVITAAHCTVDKPNW 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,167
Number of Sequences: 2352
Number of extensions: 12452
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)