Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I19
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    31   0.042
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   2.7  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   6.3  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 30.7 bits (66), Expect = 0.042
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 33  AAKWLCIENVYQKFHRPNY-YDIGGTYY 113
           +A WL I N  Q+ + P Y YDI G Y+
Sbjct: 556 SASWLAIANALQRINTPKYLYDIIGDYF 583


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 429 LYIAIAFPSPKILNLNVFDKLLTVHTF 509
           LY+A+   S K  N+ V   LLTV T+
Sbjct: 283 LYVAVTGLSTKAANVGVLFILLTVETY 309


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -2

Query: 403 SRLEKLYVLTYSKQPSSGSPSICVE*LFSLVFSNLYSFSDFVNRTIF 263
           + +EK++++T +K P      + VE +   V S L    D + + +F
Sbjct: 68  AHIEKIFLITLNKNPQKNKQFVYVEDVAQGVDSGLLDL-DVLEQALF 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,805
Number of Sequences: 2352
Number of extensions: 14647
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)