Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_I18
(792 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC354.09c |||Tre1 family protein |Schizosaccharomyces pombe|ch... 30 0.33
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos... 28 1.3
SPAC17C9.10 |stm1||G-protein coupled receptor Stm1|Schizosacchar... 28 1.8
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 28 1.8
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 27 2.3
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 2.3
SPAC2E12.03c |||G-protein coupled receptor |Schizosaccharomyces ... 27 2.3
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 2.3
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 26 5.4
SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces po... 26 5.4
SPAC1952.09c |||acetyl-CoA hydrolase|Schizosaccharomyces pombe|c... 26 7.1
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 26 7.1
SPBC18H10.20c |||conserved fungal protein|Schizosaccharomyces po... 25 9.4
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 25 9.4
>SPBC354.09c |||Tre1 family protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 794
Score = 30.3 bits (65), Expect = 0.33
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 440 SIEIPGSNEPNKTVVISYDICAYGKSPGHSEVTFNVTPPGFVNLDTVY 583
S+ I G + + +++ SY + Y + TF +P GFVN VY
Sbjct: 197 SLSIDGDDSFHPSLIESYQVGGYDGVSIPTPATFGGSPSGFVNAPLVY 244
>SPBC8D2.01 |gsk31||serine/threonine protein kinase
Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 381
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 568 LRHSVPTYNRHALQR-NKHNIVHNGLDILRGLVSFVLPSNIHKLQ 699
+ HS+P H L+ HN N +D+L ++++V I ++
Sbjct: 258 VNHSLPNVRPHTLESVMPHNCTKNAMDLLHKMLTYVPSKRISAIE 302
>SPAC17C9.10 |stm1||G-protein coupled receptor
Stm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 605 SNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVXGLNFDFLALNIMG 754
+N + +S +G + W V PQ+ N+K +S ++ FL + ++G
Sbjct: 11 ANILTELSSFLGALSLGCWVVLLIPQLLENYKNQSGESISDLFLIIWLIG 60
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 586 TYNRHALQRNKHNIVHNGLDILRGLVSFVLPSNIHKLQ 699
+Y H L R +H+I+ N L+ + FV +N +Q
Sbjct: 539 SYGNHVLNRIQHDILENHFCCLKNVKDFVCGANTISMQ 576
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 27.5 bits (58), Expect = 2.3
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = +2
Query: 257 LILGIPSAHSQLDKMYVEVTDLNLLVEETRLLKLVQIGQYNTSLEVISNIQHPDIVQLVP 436
LILGIPS +Y + ++ E T + K S ++N P +
Sbjct: 792 LILGIPSLQLVRPDIYDSIREMIASNENTEVEK-----DKLDSFSALANPASPKAPEYTF 846
Query: 437 PSIEIPGSNEPNKTVVISYDIC 502
SI +P N PN I +C
Sbjct: 847 VSIHVPPLNVPNAEGEIEESVC 868
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 655 GLVSFVLPSNIHKLQKEKRXRSQLRFSGAKHN 750
G V++ SN+HK KEK SQ+R + K N
Sbjct: 643 GRVAYSRISNLHKSSKEKGKDSQVRVALHKEN 674
>SPAC2E12.03c |||G-protein coupled receptor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 635 MGWIYFAAWSVSFYPQIYINFKRKSVXGLNFDFLALNIMG--FTMYSL 772
MG + ++ F PQ F+ ++V G+++ FLA++ G F+ SL
Sbjct: 145 MGVLATVLVNIGFLPQYISIFRARAVTGISYLFLAIDSSGSLFSFLSL 192
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 659 WSVSFYPQIYINFKRKSVXGLNFDFLALNIMGFTMYSLXN 778
W V PQI N++ KS GL+ F+ ++ S+ N
Sbjct: 30 WCVQLIPQIIKNYRAKSTEGLDTLFILSWVVASIPLSVYN 69
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +1
Query: 493 RYMRVRKES-GTFGSDVQCY---TARFCQLR--HSVPTYNRHAL 606
RY VR GTFG +QCY T R C ++ ++P Y +L
Sbjct: 361 RYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASL 404
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 636 WVGYTSRPGQFRSTLKYT*TSKGKAXSVSTSI 731
W G+T PG +T +T + A ++S S+
Sbjct: 454 WQGFTQSPGSLETTNGFTLDERNLAFTLSNSV 485
>SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 432
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 317 DLNLLVEETRLLKLVQIGQYNTSLEVISNIQH 412
DLNL V +L LVQ GQ L I + H
Sbjct: 358 DLNLQVYHEKLRNLVQQGQAAECLNTIKRMSH 389
>SPAC1952.09c |||acetyl-CoA hydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 25.8 bits (54), Expect = 7.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 317 DLNLLVEETRLLKLVQIGQYNTSLEVISNIQHPDIVQLVPPSIEI 451
DL++LV E L L + + EVI HPD L+ +I
Sbjct: 439 DLDILVTEQGLADLRGLSPTERAREVIDKCAHPDYKPLLREYFDI 483
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 629 YIMGWIYFAAWSVSFYPQIYINFKRKSVXGL 721
Y++ W+ AAW + Y + Y ++R ++ GL
Sbjct: 102 YVLFWLSMAAWVLQLYARSY--WQRDTLLGL 130
>SPBC18H10.20c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 361
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 594 VIRRYTVSKLTKPGGVTLNVTSECPGLF 511
++R V LT P G+ ++ ECP +F
Sbjct: 323 ILRVSVVQPLTTPAGLGISWDEECPPVF 350
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 272 PSAHSQLDKMYVEVTDLNLLVEETR 346
P SQ+ + V ++DLN ++E TR
Sbjct: 256 PGRTSQIQQANVSISDLNAVLENTR 280
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,993,618
Number of Sequences: 5004
Number of extensions: 61230
Number of successful extensions: 161
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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