Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I17
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    24   1.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   7.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.8  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -3

Query: 500 ASPVGHPPIESHSACKKGPAARCMAP--STPPPAFSLELAAFTIASISSLVMS 348
           +SP G  P  S S+    PAAR M P  S          AAF  A+  S+V S
Sbjct: 38  SSPSGSSPQHSSSSASTSPAAR-MYPYVSAAHHHHQAAAAAFGAAASGSMVPS 89


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -3

Query: 500 ASPVGHPPIESHSACKKGPAARCMAP--STPPPAFSLELAAFTIASISSLVMS 348
           +SP G  P  S S+    PAAR M P  S          AAF  A+  S+V S
Sbjct: 38  SSPSGSSPQHSSSSASTSPAAR-MYPYVSAAHHHHQAAAAAFGAAASGSMVPS 89


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 455 KKGPAARCMAPSTPPPAFSL 396
           KKG    C+AP   PPA+ +
Sbjct: 22  KKGRFWECLAPIPQPPAYPI 41


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 455 KKGPAARCMAPSTPPPAFSL 396
           KKG    C+AP   PPA+ +
Sbjct: 22  KKGRFWECLAPIPQPPAYPI 41


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 712 LYVALCVLRDDSENRKFQWIYTEKRSILFGI 620
           LY+A  V+     N      +  KRS LFGI
Sbjct: 326 LYMAAQVIEKSVANFTAAGFFDVKRSTLFGI 356


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +3

Query: 540 HPHCWAP 560
           +PHCW P
Sbjct: 489 NPHCWVP 495


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +1

Query: 484 CPTGDAKVTGGYNLPAKYIIHTVGPQDGSAEKLESCYEK 600
           CP    K T    L     +HT  P D + E++++   K
Sbjct: 197 CPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVK 235


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 271 LKEFEKIKINTEKNKSISERVSIFKGDITKLE 366
           L+EF++I +   K KSI  +    K  + K+E
Sbjct: 220 LREFDQIVVILSKVKSILNKKCCEKCGLKKIE 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,414
Number of Sequences: 336
Number of extensions: 3586
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)