Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I16
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007070-1|AAP35733.1|   91|Homo sapiens ubiquinol-cytochrome c ...    59   1e-08
BC107703-1|AAI07704.1|   91|Homo sapiens ubiquinol-cytochrome c ...    59   1e-08
BC015177-1|AAH15177.1|   91|Homo sapiens ubiquinol-cytochrome c ...    59   1e-08
BC001934-1|AAH01934.1|   91|Homo sapiens ubiquinol-cytochrome c ...    59   1e-08
BC001426-1|AAH01426.1|   91|Homo sapiens ubiquinol-cytochrome c ...    59   1e-08
AL122001-4|CAI21963.1|   91|Homo sapiens ubiquinol-cytochrome c ...    59   1e-08
Y00764-1|CAA68733.1|   91|Homo sapiens protein ( Human mRNA for ...    56   8e-08
M36647-1|AAA36317.1|   91|Homo sapiens protein ( Homo sapiens mi...    56   8e-08
BC093060-1|AAH93060.1|   85|Homo sapiens UQCRH protein protein.        56   8e-08
Y08406-1|CAA69682.1|  121|Homo sapiens immunoglobulin protein.         31   3.4  

>BT007070-1|AAP35733.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = +1

Query: 121 LVXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 300
           LV P  ++R  C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 301 LFKRLK 318
           LF  LK
Sbjct: 86  LFNNLK 91


>BC107703-1|AAI07704.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = +1

Query: 121 LVXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 300
           LV P  ++R  C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 301 LFKRLK 318
           LF  LK
Sbjct: 86  LFNNLK 91


>BC015177-1|AAH15177.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = +1

Query: 121 LVXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 300
           LV P  ++R  C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 301 LFKRLK 318
           LF  LK
Sbjct: 86  LFNNLK 91


>BC001934-1|AAH01934.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = +1

Query: 121 LVXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 300
           LV P  ++R  C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 301 LFKRLK 318
           LF  LK
Sbjct: 86  LFNNLK 91


>BC001426-1|AAH01426.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = +1

Query: 121 LVXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 300
           LV P  ++R  C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 301 LFKRLK 318
           LF  LK
Sbjct: 86  LFNNLK 91


>AL122001-4|CAI21963.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = +1

Query: 121 LVXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 300
           LV P  ++R  C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 301 LFKRLK 318
           LF  LK
Sbjct: 86  LFNNLK 91


>Y00764-1|CAA68733.1|   91|Homo sapiens protein ( Human mRNA for
           mitochondrial hinge protein. ).
          Length = 91

 Score = 56.0 bits (129), Expect = 8e-08
 Identities = 26/66 (39%), Positives = 35/66 (53%)
 Frame = +1

Query: 121 LVXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 300
           LV P  ++R  C Q         + + C++R +SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERDSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 301 LFKRLK 318
           LF  LK
Sbjct: 86  LFNNLK 91


>M36647-1|AAA36317.1|   91|Homo sapiens protein ( Homo sapiens
           mitochondrial hinge protein precursor, mRNA, complete
           cds. ).
          Length = 91

 Score = 56.0 bits (129), Expect = 8e-08
 Identities = 26/66 (39%), Positives = 35/66 (53%)
 Frame = +1

Query: 121 LVXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 300
           LV P  ++R  C Q         + + C++R +SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERDSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 301 LFKRLK 318
           LF  LK
Sbjct: 86  LFNNLK 91


>BC093060-1|AAH93060.1|   85|Homo sapiens UQCRH protein protein.
          Length = 85

 Score = 56.0 bits (129), Expect = 8e-08
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +1

Query: 130 PQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDLFK 309
           P  ++R  C Q         + + C++RV+SRS T E C EEL D++H  D CV   LF 
Sbjct: 23  PLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHKLFN 82

Query: 310 RLK 318
            LK
Sbjct: 83  NLK 85


>Y08406-1|CAA69682.1|  121|Homo sapiens immunoglobulin protein.
          Length = 121

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 466 NYLYLQINSNNIGDSHILYINKFTKTTRPIKLRMW 362
           N LYLQ+NS  + D+ I Y  K +    P  L +W
Sbjct: 77  NTLYLQMNSLRVEDTAIYYCAKVSGVVAPAALDVW 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,279,066
Number of Sequences: 237096
Number of extensions: 1058568
Number of successful extensions: 10824
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10824
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)