Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_I15
(712 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 299 6e-80
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 260 2e-68
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 241 1e-62
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 241 1e-62
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 227 2e-58
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 224 2e-57
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 216 5e-55
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 203 4e-51
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 199 6e-50
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 196 3e-49
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 189 5e-47
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 189 5e-47
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 174 2e-42
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 171 2e-41
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 150 4e-35
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 93 6e-18
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 88 2e-16
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 87 4e-16
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 87 4e-16
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 85 1e-15
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 85 2e-15
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 84 3e-15
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 84 4e-15
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 83 7e-15
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 82 2e-14
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 79 1e-13
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 79 1e-13
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 78 2e-13
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 78 2e-13
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 77 4e-13
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 76 1e-12
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 75 2e-12
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 73 5e-12
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 73 5e-12
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 72 2e-11
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 71 4e-11
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 70 5e-11
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 69 2e-10
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 68 3e-10
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 68 3e-10
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 67 3e-10
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 66 6e-10
UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;... 66 6e-10
UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome... 66 8e-10
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 66 1e-09
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 65 1e-09
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 65 2e-09
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 64 3e-09
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 64 4e-09
UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;... 63 7e-09
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 63 7e-09
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 62 1e-08
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 62 2e-08
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 62 2e-08
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 61 3e-08
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 60 7e-08
UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precurso... 59 9e-08
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 59 9e-08
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 58 2e-07
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 56 7e-07
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 56 7e-07
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 56 9e-07
UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precurso... 56 9e-07
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 56 1e-06
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 56 1e-06
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 56 1e-06
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 54 3e-06
UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2; Caen... 54 3e-06
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 54 3e-06
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 54 5e-06
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 52 1e-05
UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome s... 51 3e-05
UniRef50_P22141 Cluster: Proteasome component C11; n=36; Ascomyc... 51 3e-05
UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giar... 50 6e-05
UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precurso... 50 6e-05
UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n... 49 1e-04
UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1; En... 48 2e-04
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 48 2e-04
UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8; Magno... 47 5e-04
UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5; Plas... 47 5e-04
UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1; Tric... 47 5e-04
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 47 5e-04
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 46 7e-04
UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5; Oligohymenop... 46 7e-04
UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4... 46 7e-04
UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2; Caen... 46 0.001
UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1; Para... 46 0.001
UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit bet... 44 0.003
UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2; ... 44 0.003
UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2... 44 0.004
UniRef50_A3EPC3 Cluster: Putative proteasome A-type and B-type; ... 44 0.005
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 43 0.006
UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1; Usti... 43 0.009
UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4; Endo... 42 0.011
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 42 0.015
UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lambli... 42 0.015
UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-... 42 0.015
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 42 0.020
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 41 0.026
UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=... 41 0.035
UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giar... 40 0.060
UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family pro... 40 0.060
UniRef50_A5LHX3 Cluster: Proteasome subunit beta type-11 precurs... 39 0.11
UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1; Ajellom... 39 0.14
UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10, mitoc... 38 0.32
UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;... 36 0.74
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 36 0.74
UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome... 36 0.98
UniRef50_Q09544 Cluster: ATP synthase delta chain, mitochondrial... 36 0.98
UniRef50_A2QVK6 Cluster: Catalytic activity: PRE2 has a chymotry... 36 1.3
UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40; F... 36 1.3
UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 35 2.3
UniRef50_Q6CGU2 Cluster: Yarrowia lipolytica chromosome A of str... 35 2.3
UniRef50_Q4SM94 Cluster: Chromosome 3 SCAF14553, whole genome sh... 34 3.0
UniRef50_UPI0000F2C314 Cluster: PREDICTED: hypothetical protein;... 33 5.2
UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;... 33 6.9
UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome... 33 9.2
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 299 bits (733), Expect = 6e-80
Identities = 132/195 (67%), Positives = 165/195 (84%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GGAV+AM G+ CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV QR
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
LKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P++C++DL
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
IGCP +DFVVSGTC+EQ+YGMCE+LWEPN+ PD LFETISQA++NA DRDA+SG G +
Sbjct: 127 IGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVI 186
Query: 664 VYIIEKDKITXKHVK 708
V+IIEKDKIT + +K
Sbjct: 187 VHIIEKDKITTRTLK 201
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 260 bits (638), Expect = 2e-68
Identities = 116/178 (65%), Positives = 142/178 (79%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+G AV+ M G+ C AIA D RFG+ QT+ST+F KV+ +GP LYVG PGLATD QTVFQR
Sbjct: 7 NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQTVFQR 66
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L+FR N+YEL+ENR ++P+T + MLSNLLYERRFGPYF+EPV+AG+D ++PYV MDL
Sbjct: 67 LQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMDL 126
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWG 657
IGC E DFVVSGTC+EQ+YGMCE LWE N+ ELFE ISQ ++NA +RDAISG G
Sbjct: 127 IGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAISGLG 184
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 241 bits (590), Expect = 1e-62
Identities = 109/195 (55%), Positives = 151/195 (77%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GGA++AM G+ VAIA D+ FGIQAQ V+T+F ++F MG LY+GL GLATD Q V Q
Sbjct: 7 NGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDVQRVAQC 66
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
LKF++NLYELKE + ++P TF++M++N LYE+ FGPY+ +PVIAGLD +P+ C++DL
Sbjct: 67 LKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPFSCSLDL 126
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
IG P +DFVV+G+ +EQ+YGMCE+LWEPN+ P+ FETIS A++NA D A SG G +
Sbjct: 127 IGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAGSGMGVI 186
Query: 664 VYIIEKDKITXKHVK 708
++I +KDKIT + +K
Sbjct: 187 IHITKKDKITTRTLK 201
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 241 bits (590), Expect = 1e-62
Identities = 107/189 (56%), Positives = 148/189 (78%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+G AVVAM G+ C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD QT++QR
Sbjct: 7 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 66
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L FR LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL DN+P++C MD
Sbjct: 67 LVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPFICTMDC 125
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
IG +DFVVSGT SE LYG CE++++PN++P+ELFETISQAL ++ DRD +SGWG
Sbjct: 126 IGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLSGWGGF 185
Query: 664 VYIIEKDKI 690
V ++ ++
Sbjct: 186 VLLVTPTEV 194
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 227 bits (556), Expect = 2e-58
Identities = 102/197 (51%), Positives = 145/197 (73%), Gaps = 1/197 (0%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQ-TVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 300
+GGA+VAM G+ CVAIA DKR G+ Q TVS+NFPK F++ + + GLATD QT+
Sbjct: 22 NGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQTLKD 81
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
+ F++N+Y+L+ ++ M KT S M+ ++LY RRFGP+F++ VIAGLD D+ PY+ D
Sbjct: 82 EIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDT-DSSPYITCFD 140
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGA 660
L+G P P DFVV+GTCSEQLYG+CEAL++P + P++LFET+SQ L+ DRD +SGWGA
Sbjct: 141 LVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCLSGWGA 200
Query: 661 VVYIIEKDKITXKHVKT 711
V++I D++ + +KT
Sbjct: 201 EVHVITPDRVISRSLKT 217
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 224 bits (547), Expect = 2e-57
Identities = 101/194 (52%), Positives = 134/194 (69%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
GG VVAM G CV IA+D R G Q T++T+ KV ++ +YVGL G +D +TV +++
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
FR NLYEL+ENR ++P+ S M+SNL Y+ RFG YF EP++AGLD N+PY+C MD I
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDD-TNKPYICCMDTI 126
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
GC + P DFV GT E L G+CE W N+KPDELFE +Q++++ +RDA SGWGAVV
Sbjct: 127 GCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVV 186
Query: 667 YIIEKDKITXKHVK 708
Y I KDK+ +K
Sbjct: 187 YTITKDKVNVSTIK 200
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 216 bits (527), Expect = 5e-55
Identities = 93/194 (47%), Positives = 137/194 (70%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
GG+ +AM G+ C + +D R G Q +T+S PK+ + + +GL GL TD QT Q++
Sbjct: 8 GGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQQTFAQKV 67
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
FR +Y+L+E R + K F+A++S++LYE RFGP+F+EPVI +D + Y+C DLI
Sbjct: 68 NFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLI 127
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G P EPED+V +GTC+E L+GMCEALW P L+P+ELFE +QA+++A DRD++SG+GAV
Sbjct: 128 GAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSLSGYGAVA 187
Query: 667 YIIEKDKITXKHVK 708
I+ KDK+ + +K
Sbjct: 188 AIVTKDKLVTRLIK 201
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 203 bits (495), Expect = 4e-51
Identities = 91/176 (51%), Positives = 127/176 (72%), Gaps = 1/176 (0%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 300
+G A+VAM G CV IA+D R+G+ Q QTV K FQ+ +VG+ GLATD QT+ Q
Sbjct: 8 NGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQTMAQ 67
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
L FR+ L+ L+E R M+P+T ++S++LYE+RFGPYF EPV+AGLD D+ P++C D
Sbjct: 68 LLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDK-DHNPFLCAFD 126
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAIS 648
IG ++ +DFVVSGT SEQL+G+CE+ W P + DELFET++Q L++A DRD ++
Sbjct: 127 FIGAMSKAQDFVVSGTSSEQLFGVCESFWRPKMNKDELFETLAQCLLSAVDRDCLA 182
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 199 bits (485), Expect = 6e-50
Identities = 89/197 (45%), Positives = 132/197 (67%), Gaps = 1/197 (0%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 300
+GGA++AM G+ CVA ATD R G +T+ST+F KV + +G GLATD T+
Sbjct: 6 NGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDIHTLTN 65
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
+KF+ NLY L+E R + K S M +++LY +RF PYF+EP++AGLD +N P++ D
Sbjct: 66 LIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDN-NNVPFIAGYD 124
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGA 660
LIGC + +F +SGT QL+G+CE+ + P+L+PDEL E +SQ +++ DRDA SGWG
Sbjct: 125 LIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAFSGWGC 184
Query: 661 VVYIIEKDKITXKHVKT 711
VY++ +K+ K +K+
Sbjct: 185 KVYLLTPEKLVTKTLKS 201
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 196 bits (479), Expect = 3e-49
Identities = 101/207 (48%), Positives = 134/207 (64%), Gaps = 12/207 (5%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 300
+GG V+ M G CVAIA D R G TVSTNF K+F+M +YVGL GLATD QT+++
Sbjct: 8 NGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDIQTLYE 67
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAG------LDPYDN-- 456
L++R+NLYE+++ M F+ MLS++LY RF PYF+ P++ G LD
Sbjct: 68 LLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKV 127
Query: 457 ---QPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNA 627
+PY+ DLIG E +DFVV+G SEQLYGMCE+L+ + D LFETISQ L++A
Sbjct: 128 CSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQCLLSA 187
Query: 628 ADRDAISGWGAVVYIIEKDKITXKHVK 708
DRD +SGWGA VY++ D I K +K
Sbjct: 188 LDRDCLSGWGAEVYVLTPDTIMKKKLK 214
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 189 bits (461), Expect = 5e-47
Identities = 88/183 (48%), Positives = 128/183 (69%), Gaps = 1/183 (0%)
Frame = +1
Query: 139 VAMXGQACVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 315
VAM G+ CVAIA+D R GI Q QT + ++ K+ ++ L++GL GL D T+ Q+L+F+
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 316 MNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCP 495
++YEL+ENR+M PK F++++S LYE+RF PY+ EPV+AGLD D +PY+ +MDLIG
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDK-DGKPYITSMDLIGAD 128
Query: 496 NEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYII 675
+DFVV+G E L+G+CE+ + +L+PDELF I L +RD +SGWG +V +I
Sbjct: 129 ASADDFVVAGDNVESLFGVCESFYRKDLEPDELFNVIGNCLNAGVNRDCLSGWGGIVTLI 188
Query: 676 EKD 684
KD
Sbjct: 189 TKD 191
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 189 bits (461), Expect = 5e-47
Identities = 87/195 (44%), Positives = 126/195 (64%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG+++AM VAI DKR G+ + TVS +F ++ ++GP LYVGLP DTQ + ++
Sbjct: 8 YGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPDTQVLLRK 67
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
++ NL+ L+ R M P+ S+M+S LLY +R PY P++AGL D +PY+ MD
Sbjct: 68 IRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTS-DGKPYISGMDC 126
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
IG P DFV GT + L G+CEAL+ P++ + LF T QA +NA DRDA+SGWGA
Sbjct: 127 IGSIASPGDFVAVGTADKNLMGICEALYRPDMDEENLFVTCVQAFLNAIDRDALSGWGAD 186
Query: 664 VYIIEKDKITXKHVK 708
Y+I K+K+T + +K
Sbjct: 187 CYVIGKNKVTKRSIK 201
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 174 bits (424), Expect = 2e-42
Identities = 82/194 (42%), Positives = 123/194 (63%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
GGAVV M G+ CVAIA D R+G++ Q S NF KVFQ+ G GL +D QT+ +++
Sbjct: 10 GGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEKV 69
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
K+ NLY L+E + P+ +++LY++RF PY++ P+IAG+D N YVC+ D I
Sbjct: 70 KYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS-YVCSYDYI 128
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G P E GT S +L GMC++ ++ ++P+EL E + Q L+ A +RDA SGWG V
Sbjct: 129 GSP-EISQVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAFSGWGVEV 187
Query: 667 YIIEKDKITXKHVK 708
Y++ +D +T ++K
Sbjct: 188 YLLTRDNLTIYNMK 201
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 171 bits (415), Expect = 2e-41
Identities = 77/191 (40%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDTQTVFQ 300
+G A++ + G CVA+A DKR G QT++ N ++F++ + +GL GL TD T ++
Sbjct: 8 NGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYR 67
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
+++ + NLY L+E+R +RP+ + M+S+ LY+ RFGPYFI P+IAG + D +PY+ MD
Sbjct: 68 QIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEA-DGKPYLGAMD 126
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGA 660
IGC ++ +F ++GT S+ L G+CE +P++ DE+ + Q + +A +RDA SGWGA
Sbjct: 127 TIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWGA 186
Query: 661 VVYIIEKDKIT 693
V ++ +D T
Sbjct: 187 HVVVLRRDGTT 197
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 150 bits (363), Expect = 4e-35
Identities = 75/167 (44%), Positives = 112/167 (67%)
Frame = +1
Query: 208 VSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNL 387
++T+ K+F MG L + L GLAT+ QT Q LKF++NL EL E ++P T ++++NL
Sbjct: 2 LTTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANL 61
Query: 388 LYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALW 567
LY+++FGP + EPVIA LD P++C++DLI CP +DFVVS TC+EQ+ GMCE+L
Sbjct: 62 LYKKQFGPCYTEPVIAWLDLKTFTPFLCSLDLISCPVVTDDFVVSSTCAEQMCGMCESLG 121
Query: 568 EPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITXKHVK 708
+ L ET+SQA++NA D DA + + ++ E+DK T + +K
Sbjct: 122 AHHA---HLLETVSQAMLNAVDGDA-ARCKSHFHLAEEDKTTTRILK 164
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 93.1 bits (221), Expect = 6e-18
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
GG VVA+ G+ + IA+D G + K+F++ + +G+ GL D + L
Sbjct: 5 GGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEIL 64
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
++ +++ KE + M P +++S LLY++RF PY +E ++AG + +P++ +D I
Sbjct: 65 EYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTE-NGKPFLGTVDCI 123
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G + ++ G E ++ + + LW P + EL +S+++ R+ S + V
Sbjct: 124 GAISYISNYACIGNLCENIFPLIQFLWRPGMDLKELIILVSKSMKVGNRRNCYSSKNSTV 183
Query: 667 YIIE-KDKITXK 699
I K KI K
Sbjct: 184 MIYNIKYKICKK 195
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 88.2 bits (209), Expect = 2e-16
Identities = 53/194 (27%), Positives = 99/194 (51%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + + V +A +KR T+S+ KVF + L + G+ D QT+ + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
K YEL+ R + + +LS +++ RRF P+F E ++ G+D + P++ MD +
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGID--EEGPHLIVMDPL 125
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E +++ GT ++ + + + P++ +E + QAL A +RD +SG G +
Sbjct: 126 GSLIE-DNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSGGGIDL 184
Query: 667 YIIEKDKITXKHVK 708
I++K+ + V+
Sbjct: 185 AIVDKNGAREEEVR 198
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 87.0 bits (206), Expect = 4e-16
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + V +A D+R + K+F++ + V G D Q + +
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLM 69
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
+ LYEL+ NRM+ + + M+S++L+ + F PY ++ ++ G + D+ P + N+D
Sbjct: 70 RAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFN--DDDPALYNLD 127
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGA 660
G E ED+ +G+ S YG+ EA +E + D+ E +A+ +A +RD +G G
Sbjct: 128 PSGSIIE-EDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEGV 186
Query: 661 VVYIIEKDK 687
V I +++
Sbjct: 187 TVVTITREE 195
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 87.0 bits (206), Expect = 4e-16
Identities = 55/187 (29%), Positives = 92/187 (49%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + + V +AT+KR + S K++Q+ + + G D Q + + +
Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARII 70
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
K NLYE++ R + + + SNLL R+ PY ++ +I G+D Y ++D I
Sbjct: 71 KIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIY--SIDPI 128
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E +D V +G+ S YG+ E + P + DE E +A+ +A RD+ SG G V
Sbjct: 129 GGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDV 188
Query: 667 YIIEKDK 687
I +D+
Sbjct: 189 VKITEDE 195
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 294
+GGAV+AM G+ CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV
Sbjct: 31 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 87
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +1
Query: 532 SEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITXKHVK 708
S+ + CE+ +P+ LFETISQA++NA DRDA+SG G VV++IEK+KIT + +K
Sbjct: 122 SQSPHARCES---SRREPEHLFETISQAMLNAVDRDAVSGMGVVVHVIEKNKITTRTLK 177
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 84.6 bits (200), Expect = 2e-15
Identities = 56/184 (30%), Positives = 94/184 (51%)
Frame = +1
Query: 130 GAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLK 309
G V + V +A +KR +S + KV+++ + + GL D QT+ + ++
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 310 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 489
M LYEL N + T + +LS +LYERR PY+ E V+ GLD + Y ++D IG
Sbjct: 66 AEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSHLY--SLDPIG 123
Query: 490 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 669
E +D+V G+ ++ + E+ ++ ++ DE +++ A RDA SG G V
Sbjct: 124 AIIE-DDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASGDGVDVL 182
Query: 670 IIEK 681
+I K
Sbjct: 183 VIGK 186
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 84.2 bits (199), Expect = 3e-15
Identities = 50/186 (26%), Positives = 92/186 (49%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + V A++KR VS K F + P + GL D Q + ++
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ +++ R + P T + M+SN++YERR+ P + ++ G+ ++P + +D +
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYTLDPL 123
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G P+++ GT +E G+ + ++PN+ DE + +A+ A+ RD+ SG G V
Sbjct: 124 GSV-LPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGVDV 182
Query: 667 YIIEKD 684
+I KD
Sbjct: 183 LVITKD 188
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 83.8 bits (198), Expect = 4e-15
Identities = 49/188 (26%), Positives = 92/188 (48%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + V +ATDKR + K++++ + + + G D Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
LY+++ R + P + +LSN+L+ R P+ + +I G D + + ++D +
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAK-LFSLDPL 124
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G NE + F +G+ S YG+ EA ++ ++ +E + AL +A +RD SG G +
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISL 184
Query: 667 YIIEKDKI 690
+I KD +
Sbjct: 185 AVITKDGV 192
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 83.0 bits (196), Expect = 7e-15
Identities = 51/183 (27%), Positives = 88/183 (48%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + V +A DKR S K+ + + + + GL D Q + L
Sbjct: 25 GTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDVL 84
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ + LYE+ + +++LSN+L+ +F PY ++ ++ G YD QP + +DL
Sbjct: 85 REEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGG---YDTQPRLYTLDLF 141
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E + + +G+ S YG+ E + +L +E + + A+ +A RDA SG GA V
Sbjct: 142 GSITE-DKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDGADV 200
Query: 667 YII 675
+I
Sbjct: 201 VVI 203
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 81.8 bits (193), Expect = 2e-14
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG V+A+ G+ +A+D R S + PK +++ T +G G D T+ +
Sbjct: 33 NGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKI 92
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 93 IEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDE-EGRGAVYSFDP 151
Query: 484 IGCPNEPEDFVVSGTCSEQL---------YGMCEALWEPNLKPDELFETISQALVNAADR 636
+G + + + G+ S L + E + + L ++ + + ++AA+R
Sbjct: 152 VG-SYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAER 210
Query: 637 DAISGWGAVVYIIEKDKI 690
D +G + II K+ I
Sbjct: 211 DVYTGDALKICIITKEGI 228
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 79.0 bits (186), Expect = 1e-13
Identities = 48/183 (26%), Positives = 93/183 (50%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G + + + V +A DKR +S NF K+F + + + GL D + + +
Sbjct: 5 GATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIV 64
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ +M L L+ + + + LS+LLY +F P+ +E ++ G+DP +P + +D +
Sbjct: 65 EGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDP-GGEPKLYVLDPL 123
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E ED+V +GT + +G+ E +++ + +E + +AL + RDA +G G V
Sbjct: 124 GSIIE-EDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDAGTGDGIDV 182
Query: 667 YII 675
++
Sbjct: 183 LVL 185
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/186 (27%), Positives = 86/186 (46%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + + V +A D+R K+ ++ + + GL D Q + + L
Sbjct: 15 GTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLAEWL 74
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ YE+ R M + LS +L+ +F PY ++ ++ G YD QP + N+D
Sbjct: 75 ANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGG---YDTQPRLYNIDWF 131
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E E +V +G+ S G+ E + PNL +E E +A+ ++ RD +G G V
Sbjct: 132 GSVTE-EKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTGNGVDV 190
Query: 667 YIIEKD 684
+I KD
Sbjct: 191 VVIGKD 196
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 78.2 bits (184), Expect = 2e-13
Identities = 48/182 (26%), Positives = 90/182 (49%)
Frame = +1
Query: 163 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 342
V +ATD R + S + KV ++ P + + G + Q + LK +LYE +
Sbjct: 61 VVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTLKAETSLYETRRG 120
Query: 343 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 522
+ M + S + NLL F Y ++P++ G+D D ++ ++D +G E E++ V+
Sbjct: 121 KDMSMEALSTLTGNLLRSGAF--YIVQPILGGVD--DEGSHIYSIDALGGTTE-EEYTVT 175
Query: 523 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITXKH 702
G+ S+ G+ E ++ ++ DE ++A+ +A +RD SG G V ++ D +
Sbjct: 176 GSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLASGNGINVAVVTDDGVDITR 235
Query: 703 VK 708
K
Sbjct: 236 YK 237
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 77.8 bits (183), Expect = 2e-13
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG ++A+ G+ +A+D R + + PK +++ +G G D T+ +
Sbjct: 36 NGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKI 95
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 96 IEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFDP 154
Query: 484 IGCPNEPEDFVVSGTCSEQL---------YGMCEALWEPNLKPDELFETISQALVNAADR 636
+G + + F G+ S L + + + L D + ++AA+R
Sbjct: 155 VG-SYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
Query: 637 DAISGWGAVVYIIEKDKITXKHV 705
D +G + I+ K+ I + V
Sbjct: 214 DVYTGDALRICIVTKEGIREETV 236
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 77.0 bits (181), Expect = 4e-13
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 12/201 (5%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG++VA+ G IA D R S K+F++ P +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGS 87
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
+K RM YE R M + + MLS +Y RRF PY++ ++AG+D + + V + D
Sbjct: 88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGID-NEGKGVVYSYDP 146
Query: 484 IG-CPNEPEDFVVSGTCSEQLYGMCE-ALWEPN----------LKPDELFETISQALVNA 627
IG C E + GT L + + + N L + S ++A
Sbjct: 147 IGHC--EKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISA 204
Query: 628 ADRDAISGWGAVVYIIEKDKI 690
A+RD +G ++ II KD I
Sbjct: 205 AERDIYTGDSVLINIITKDGI 225
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 75.8 bits (178), Expect = 1e-12
Identities = 53/185 (28%), Positives = 86/185 (46%)
Frame = +1
Query: 130 GAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLK 309
G V+ + V IA +KR +S N KV + + +G GL D Q + + L+
Sbjct: 18 GTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALR 77
Query: 310 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 489
YEL+ R +R + + +LS +LY + P E V+ G D Q YV +D +G
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQIYV--LDPVG 135
Query: 490 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 669
E + +V G+ G+ E + ++ DE + A+ A +RDA+SG G V
Sbjct: 136 SLIE-DKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSGDGVDVL 194
Query: 670 IIEKD 684
I ++
Sbjct: 195 RITEE 199
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 74.9 bits (176), Expect = 2e-12
Identities = 47/185 (25%), Positives = 95/185 (51%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + + V +AT++R ++ + N K+FQ+ + + GL D Q + + +
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
K + LY L+ M + + +LSN+L + ++ PY ++ ++ G+ D P+V ++D
Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI---DTAPHVFSIDAA 124
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E + + +G+ S +YG+ E+ + + DE + + +A+ A RD+ SG V
Sbjct: 125 GGSVE-DIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDV 183
Query: 667 YIIEK 681
+I +
Sbjct: 184 AVITR 188
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 73.3 bits (172), Expect = 5e-12
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQ 300
+GG V+A IA D R Q + T F K+F++ +G G+ D +
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQS 72
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
L+ ++ LY NR + +LS +LY RRF PY+ ++ G+D + VC D
Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDE-QGKGVVCGYD 131
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPN---LKP-----DELFETISQALVNAADR 636
+G N E + GT S + + + L N +KP ++L + A+V+A +R
Sbjct: 132 AVGNYNY-EKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVER 190
Query: 637 DAISGWGAVVYIIE 678
D +G A + I +
Sbjct: 191 DICTGDSAELVICD 204
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 73.3 bits (172), Expect = 5e-12
Identities = 44/184 (23%), Positives = 88/184 (47%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + V +A++KR VS N K FQ+ P + GL D Q + ++
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ ++ R + P + + M+SN++YERRF P + ++ G+ +P + +D +
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV---VGEPAIYTLDSL 119
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G P+++ GT +E G+ + ++ + + + + + +AA RD+ SG G +
Sbjct: 120 GSV-LPDEYAAVGTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFSGDGLDI 178
Query: 667 YIIE 678
++
Sbjct: 179 LALD 182
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 71.7 bits (168), Expect = 2e-11
Identities = 46/191 (24%), Positives = 92/191 (48%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + G V +A +KR +S KV+++ L + L GL D Q + + L
Sbjct: 8 GATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKIL 67
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ + Y + R + + + +L+ +LY ++ P+ E ++ GL+ D + MD +
Sbjct: 68 RAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEA-DGTAKLYVMDPL 126
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E +D+ G+ + G+ E + ++ D+ + A+ A +RDA+SG G +
Sbjct: 127 GSLIE-DDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAMSGDGIDL 185
Query: 667 YIIEKDKITXK 699
+I +++ + K
Sbjct: 186 LVIRREEDSIK 196
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 70.5 bits (165), Expect = 4e-11
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
G +V + Q V +A+D R + + +S N KV ++ P + + G Q+ +
Sbjct: 60 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 119
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYF-IEPVIAGLDPYDNQPYVCNMD 480
L+ NLYE + M S M SNLL R GP+F + P++ G+D D+ +V ++D
Sbjct: 120 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVD--DDGGHVFSLD 174
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGA 660
G + + + G+ G+ E + +L + + + A+ +A++RD SG G
Sbjct: 175 PAG-SSMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGNGI 233
Query: 661 VVYIIEKDKIT 693
+ I D +T
Sbjct: 234 HITKITHDGLT 244
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 70.1 bits (164), Expect = 5e-11
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG ++A+ G IA D R +S N KVF + + G+ D Q + +
Sbjct: 54 NGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKH 113
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
+K Y LK + + + F +LS ++Y RR P++ ++AG+D + + V + D+
Sbjct: 114 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDS-EGRGAVYSYDV 172
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMC-EALWEPN---LKPDELFETISQALVNAADRDAISG 651
IG + +GT + + + EA+ N + + FE I A + A+RD +G
Sbjct: 173 IGSTLRTR-YGSAGTGNAMICPILDEAILSKNEAEITREFAFELIQSAFRSCAERDIYTG 231
Query: 652 WGAVVYIIEKDKI 690
V I D I
Sbjct: 232 DSVVAMCISADGI 244
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 68.5 bits (160), Expect = 2e-10
Identities = 46/175 (26%), Positives = 83/175 (47%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G ++A+ V I D R + A S K+ Q+ ++V G + DTQ + L
Sbjct: 10 GTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYL 69
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ +++Y E+ + + + +A+ S ++YE P + +I YD++P V N+ L
Sbjct: 70 RMYLSMYSQLEDSIPQVQRAAALASKIIYE---NPSLLAGLIVA--GYDDKPRVFNISLG 124
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 651
G E D+ + G+ S +YG C+ W + +E + A+ A +RD SG
Sbjct: 125 GSLTE-RDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDNASG 178
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 67.7 bits (158), Expect = 3e-10
Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG V+ + G+ V +A D R + + + PK+ ++ +G G+ +D +T+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
LK ++ L+ L+ + +L +LY RRF PY+ ++AG+ D++ + N D
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVS-NDSKGVLYNYDA 155
Query: 484 IGCPNE-PEDFVVSGTC------SEQLYGMCEALWEPNLKPDELFETISQALVNAADRDA 642
IG E V SG+ ++ + + N + + + A+ +A +RD
Sbjct: 156 IGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLNFNLRDDLDFVKDAITSATERDI 215
Query: 643 ISGWGAVVYIIEK 681
+G +YII++
Sbjct: 216 YTGDSTEIYIIDQ 228
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 67.7 bits (158), Expect = 3e-10
Identities = 44/173 (25%), Positives = 88/173 (50%)
Frame = +1
Query: 163 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 342
+ +A+++R +S KV+++ L G G+ D QT+ + + + YE+
Sbjct: 17 IVLASERRLSYGGYVLSKQAKKVYKINKFLMAGA-GIYGDLQTLTRIMNVEIKYYEVSTG 75
Query: 343 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 522
+ + + +LS +LY+ + P+ E + G+D Q YV +D IG E +++
Sbjct: 76 KPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYV--LDPIGSLIE-DNYAAV 132
Query: 523 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 681
G+ + G+ E+ ++PN+ D + I++A+ + +RD SG G + II+K
Sbjct: 133 GSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSGDGIDLAIIDK 185
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/186 (23%), Positives = 94/186 (50%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + + V A+++R + K+F++ + + G D Q + + +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ ++LY+++ N + K +++ +N+L R GP +++ ++ G+D ++P + ++D
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMD--GDKPSLYSLDPA 122
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E + ++ +G+ S YG+ E + + DE E +A+ A++RD SG G +V
Sbjct: 123 GGMIE-DTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLV 181
Query: 667 YIIEKD 684
+ KD
Sbjct: 182 AKVTKD 187
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 66.5 bits (155), Expect = 6e-10
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Frame = +1
Query: 136 VVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 315
++ + + V +A+DK+ + K+ + + + G D Q + + LK
Sbjct: 4 IIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKTE 63
Query: 316 MNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY-VCNMDLIGC 492
+ L EL R M + +LS+LLY+ RF + +IAG P +++ + + ++D IG
Sbjct: 64 LKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAG--PINSKEFGIYSLDGIGA 121
Query: 493 PNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYI 672
+E +D+ G+ G EA + P++ + + +AL ++ RD SG+G +Y
Sbjct: 122 ISEIKDYFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGYGIEIYT 181
Query: 673 IEK 681
I K
Sbjct: 182 ITK 184
>UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;
Sulfolobaceae|Rep: Proteasome subunit beta precursor -
Sulfolobus solfataricus
Length = 208
Score = 66.5 bits (155), Expect = 6e-10
Identities = 43/168 (25%), Positives = 81/168 (48%)
Frame = +1
Query: 163 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 342
V +A D+R + KV + + + G D Q ++ LK + + +
Sbjct: 26 VILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVLKNIYHYNSITKY 85
Query: 343 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 522
+ K + L+N+L ++ PY ++ +I G YD+QP + N+D +G E E++V +
Sbjct: 86 GPISIKGIATRLANVLSATKYFPYIVQILIGG---YDDQPRLFNLDYLGDITE-ENYVAT 141
Query: 523 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G+ S G+ E + P + DE + +A+ +A RD+ +G G +V
Sbjct: 142 GSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIV 189
>UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Proteasome (prosome, macropain) subunit, beta type, 3,
partial - Ornithorhynchus anatinus
Length = 104
Score = 66.1 bits (154), Expect = 8e-10
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1
Query: 400 RFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVV 519
RFGPY+ EPVIAGLDP +P++C++DLIGCP +DFVV
Sbjct: 65 RFGPYYTEPVIAGLDPTTFEPFICSLDLIGCPMVTDDFVV 104
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 65.7 bits (153), Expect = 1e-09
Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTN-FPKVFQMGPTLYVGLPGLATDTQTVFQ 300
+GG V+A+ G+ IA D R + T + K+FQ+ + G+ DT + +
Sbjct: 29 NGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQK 88
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
RLK + +E + + M + LSN LY +RF PY+ ++AG+D + ++ D
Sbjct: 89 RLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDE-QGEGWIWTYD 147
Query: 481 LIGCPNEPE-------DFVVSGTCSEQLYGMCEALWEPN--LKPDELFETISQALVNAAD 633
+G + + +V Q+ + + E N + +++ + ++ +A +
Sbjct: 148 AVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDVSCEQVVSFVKDSITSAGE 207
Query: 634 RDAISGWGAVVYIIEKDKI 690
RD +G A + +++K+ +
Sbjct: 208 RDIYTGDFADIVVVDKNGV 226
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 65.3 bits (152), Expect = 1e-09
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG+ VA+ G V IA D R + S + K Q+ + G+ D + +
Sbjct: 43 NGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKT 102
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L ++ LYE + N+ + +LS +LY +RF PY+ +++GLD + V D
Sbjct: 103 LLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDE-QGKGVVYGYDA 161
Query: 484 IGCPNEPEDFVVSGT--------CSEQLYGMCEALWEPNLKPDELFETISQALVNAADRD 639
+G ++ FV G+ Q+ G + +E ++ + + ++ +A++RD
Sbjct: 162 VGSFDQ-HKFVALGSGGSLITSILDNQISGNNQTSFE-SIDKVGIINIVKDSITSASERD 219
Query: 640 AISGWGAVVYIIEKDKITXKHVK 708
+G A V +I+ I+ ++
Sbjct: 220 VHTGDSAEVIVIDSSGISVSSLR 242
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 64.9 bits (151), Expect = 2e-09
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Frame = +1
Query: 130 GAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLK 309
G V + G+ V IA+D R ++ N K++ + G+ D + + ++K
Sbjct: 29 GTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQIK 88
Query: 310 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 489
+ Y+ + + M ++ + +LSN LY RF PY+ ++AG++ + N D +G
Sbjct: 89 AHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINS-KGKAVTYNYDAVG 147
Query: 490 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKP---DELFETISQALVNAADRDAISGWGA 660
E + SG+ E Y + ++L + +P E + +A +RD +G
Sbjct: 148 -SFEERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTGDNV 206
Query: 661 VVYIIEKDKI 690
+ I+ + I
Sbjct: 207 EIVILNSNGI 216
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 64.1 bits (149), Expect = 3e-09
Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+ G V A+ V +A DKR VS + K+ ++ +++ G+ D + ++
Sbjct: 42 NAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSKQ 101
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L R+++Y+ + + +++LS LY +RF PY+ ++AG D + V N D
Sbjct: 102 LSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDD-KGEGLVINYDA 160
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWE--PNLKPDELF---ETIS---QALVNAADRD 639
+G + + + V G+ ++ + + + +E +K ++L E IS +A +RD
Sbjct: 161 VG-SGDFKKYAVLGSGAQLITPVFDQYFEGYNKIKKEQLHTVEEFISFIVDCFESATERD 219
Query: 640 AISGWGAVVYIIEKDK 687
+G + I+ KDK
Sbjct: 220 IYTGDQLEIVILRKDK 235
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQ 300
+GG+++A+ G+ IA D R + ++ T + KV+Q+ + + G A D +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
R+K R+ YE N+ M K+ + M+ +LY +RF PY++ ++ G++ D V + D
Sbjct: 89 RVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE-DGSGAVYSFD 147
Query: 481 LIG 489
+G
Sbjct: 148 PVG 150
>UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;
Eukaryota|Rep: Proteasomal subunit beta type III - Mus
musculus (Mouse)
Length = 48
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 172 ATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 294
A D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV
Sbjct: 8 AADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 48
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 62.9 bits (146), Expect = 7e-09
Identities = 42/174 (24%), Positives = 84/174 (48%)
Frame = +1
Query: 163 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 342
V +A D+R + + N K+ ++ L + G D + + L+ LY +
Sbjct: 22 VVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSG 81
Query: 343 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 522
+ M K + +L+N+L R PY ++ G +D +P + ++D++G E + +V +
Sbjct: 82 KRMSVKALATLLANMLNGARMLPYLAWFLVGG---FDEKPRLYSVDMMGGITE-DKYVAA 137
Query: 523 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 684
G+ E Y + ++ + +LK E + +A+ +A RD SG G +V I ++
Sbjct: 138 GSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEE 191
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/122 (28%), Positives = 59/122 (48%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG VA+ G IA D R +S ++ K+ ++ + G D + + +
Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
LK R +Y+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 74 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKGCVFTYDA 132
Query: 484 IG 489
+G
Sbjct: 133 VG 134
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQ 300
+GG ++ + G+ +A D R I ++++ + PKVF G + + G A D + +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVK 85
Query: 301 RLKFRMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNM 477
R K + Y N + + + + + +LLY +RF PY++ +IAGLD D + V +
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDE-DGKGAVYSF 144
Query: 478 DLIG 489
D +G
Sbjct: 145 DPVG 148
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 61.7 bits (143), Expect = 2e-08
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRF-GIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 300
+GG + A+ G V + D R G ++ K+F++ +++ G+ D + Q
Sbjct: 51 NGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQ 110
Query: 301 RLKFRMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVC-N 474
LK+R+ Y+ ++ K + + S +LY+RRF PY+ +I G+D + VC +
Sbjct: 111 MLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGID--EKGAGVCYS 168
Query: 475 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALW---------EPNLKPDELFETISQALVNA 627
D +G EP + G+ S + + + L +L +E + A A
Sbjct: 169 YDPVG-STEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGA 227
Query: 628 ADRDAISGWGAVVYIIEKDKI 690
A+RD +G +II D +
Sbjct: 228 AERDIFTGDTVCFHIITADGV 248
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Frame = +1
Query: 223 PKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERR 402
PKVF +G + V G + D + + +K + LY + N+ ++ ++ + + ++LY +R
Sbjct: 66 PKVFDVGDNILVTANGFSADGDALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKR 125
Query: 403 FGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWE---- 570
F PY++ +IAGLD + + V + D +G E E G+ + + ++
Sbjct: 126 FFPYYVHTIIAGLDE-EGKGAVYSYDPVG-SYEREFCRAGGSAASLVMPFLDSQVNKKNQ 183
Query: 571 -----PNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKI 690
P L +E + + A +A +R G G + I+ K+ +
Sbjct: 184 QVENPPPLTLEEALKVVKDAFSSATERHIHVGDGLEILIVTKEGV 228
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 59.7 bits (138), Expect = 7e-08
Identities = 47/181 (25%), Positives = 84/181 (46%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +A + V +A D R + S + K+ ++ P + + G A D Q + L
Sbjct: 57 GTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 116
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ L+EL R + S +L+N+LY R + +IAG D + P + +D
Sbjct: 117 GIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWD--ETGPGLYYVDNE 174
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G + + F V G+ S YG+ ++ ++ ++ +E E +++ +A RD SG A V
Sbjct: 175 GGRLKGDRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASV 233
Query: 667 Y 669
Y
Sbjct: 234 Y 234
>UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precursor;
n=93; Metazoa|Rep: Proteasome subunit beta type-8
precursor - Homo sapiens (Human)
Length = 276
Score = 59.3 bits (137), Expect = 9e-08
Identities = 48/187 (25%), Positives = 82/187 (43%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG +A Q V A D R + + KV ++ P L + G A D Q +
Sbjct: 71 HGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERL 130
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L LY L+ + S +LSN++ + R + +I G D P + +D
Sbjct: 131 LAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDK--KGPGLYYVDE 188
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
G F +G+ + YG+ ++ + PNL P+E ++ +A+ A RD+ SG
Sbjct: 189 HGTRLSGNMFS-TGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVN 247
Query: 664 VYIIEKD 684
+Y +++D
Sbjct: 248 MYHMKED 254
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 59.3 bits (137), Expect = 9e-08
Identities = 33/122 (27%), Positives = 58/122 (47%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG VA+ G +A D R + ++ + K+ ++ + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L R LY+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS-EGKGCVFTYDA 130
Query: 484 IG 489
+G
Sbjct: 131 VG 132
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 58.0 bits (134), Expect = 2e-07
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G V + + V +A D + + + N K+ + + + G D Q + + L
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ Y+ R M + + +LSN+L E ++ PY ++ +I G Y ++P + N+D +
Sbjct: 66 EAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGG---YVDEPTIANLDPL 122
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV- 663
G +D+ +G+ + + E + NL ++ E +A+ A RD +G +
Sbjct: 123 G-GLIFDDYTATGSGTPFAIAILEEGYRKNLGIEKAKELAIKAVKAAGARDVYTGSKKIQ 181
Query: 664 VYIIEKDKITXKHV 705
V I KD + + V
Sbjct: 182 VVTITKDGMKEEFV 195
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 56.4 bits (130), Expect = 7e-07
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNF-PKVFQMGP----TLYVGLPGLATDTQ 288
+GGA + + G +A D R ++T + PKVF + ++ + + G A D +
Sbjct: 13 NGGATLGVSGPDFAILAGDTR-STAGYNINTRYEPKVFTIQDARDRSIVISVIGFAADGR 71
Query: 289 TVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYV 468
+ +RL + +Y+ + + + + + +S +LYE+RF PY ++ ++AG+D D Q +
Sbjct: 72 ALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDA-DGQGAI 130
Query: 469 CNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNA 627
D GC E +G S + ++ P L+P L +T Q + +A
Sbjct: 131 YYYDPAGC-IEKRSHCAAGEASSLMLPFLDS-QAPRLQPLSL-QTAQQLVRDA 180
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 56.4 bits (130), Expect = 7e-07
Identities = 33/131 (25%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNF-PKVFQMGPT--------LYVGLPGLA 276
+GG+ + + G+ +A D R + ++T + PK+F++G L + + G A
Sbjct: 40 NGGSTLGIAGKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEGDECGEGAHLVLSVVGFA 98
Query: 277 TDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN 456
D + + +RL + +Y+ K + M + L+ +LY +RF PY++ ++AG+D D
Sbjct: 99 ADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDE-DG 157
Query: 457 QPYVCNMDLIG 489
+ + + D +G
Sbjct: 158 KGALYSYDPVG 168
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 56.0 bits (129), Expect = 9e-07
Identities = 40/189 (21%), Positives = 80/189 (42%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G ++ + V + D R + K+ Q+ +YV G A D+Q V +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
++ ++ + ++ + K + ++ L Y + ++ G D Y+ + + L
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNK-NMLQTGLIVGGWDKYEGGK-IYGIPLG 129
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E + F + G+ S LYG + W+ N+ +E + + +A+ A RD SG
Sbjct: 130 GTVVE-QPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRT 188
Query: 667 YIIEKDKIT 693
II + +T
Sbjct: 189 VIINSEGVT 197
>UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precursor;
n=48; Eukaryota|Rep: Proteasome subunit beta type-5
precursor - Homo sapiens (Human)
Length = 208
Score = 56.0 bits (129), Expect = 9e-07
Identities = 46/187 (24%), Positives = 82/187 (43%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG +A + V +A D R A S KV ++ P L + G A D +
Sbjct: 3 HGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERL 62
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L + +YEL+ + S +L+N++Y+ + + +I G D P + +D
Sbjct: 63 LARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDK--RGPGLYYVDS 120
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
G F V G+ S YG+ + + +L+ ++ ++ +A+ A RDA SG
Sbjct: 121 EGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVN 179
Query: 664 VYIIEKD 684
+Y + +D
Sbjct: 180 LYHVRED 186
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 55.6 bits (128), Expect = 1e-06
Identities = 41/189 (21%), Positives = 82/189 (43%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +++A+ V + D R + KV + +Y G A DTQT+ +
Sbjct: 25 GTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTLCSYV 84
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
++ ++++ ++ R KT + + SNL+Y+ + ++AG+D +
Sbjct: 85 RYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQ-DNLSAAVIVAGIDDNEGPSIYACQPSG 143
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
C + + G+ S ++ +A + PN+ + + + AL +A RD SG +
Sbjct: 144 SCIK--QQVAIGGSGSGFIFSYVDANFRPNMDLESAKKLVKTALAHAMSRDGSSGGIIRL 201
Query: 667 YIIEKDKIT 693
I KD +T
Sbjct: 202 VNITKDNVT 210
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/107 (25%), Positives = 49/107 (45%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HGG + + G V I D R + S + ++F+M + G D R
Sbjct: 19 HGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFITR 78
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 444
++ + YE + M ++ + +SN LY +RF PY+I ++ G++
Sbjct: 79 MRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGIN 125
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 55.6 bits (128), Expect = 1e-06
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+ G + + + +A D R S K+FQ+G L G G DT V+ +
Sbjct: 89 NSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTGT-GFYADTHEVYVK 147
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
+ + + YE+ ++ + + + +LS +LY +RF PY+ V++G + +PYV + D
Sbjct: 148 MVYEIRQYEVDDS--INIHSAANLLSKILYSKRFFPYYSFCVLSGFE--KGKPYVYSYDP 203
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEAL-----W----EPNLKPDELFETISQALVNAADR 636
IG V SG+ + + ++ W E L ++ + +A +AA+R
Sbjct: 204 IGSFGS-VTCVCSGSGRSMIQPLLDSFIDKKNWNNAEETQLSQEDCIRLVVKAFNSAAER 262
Query: 637 DAISGWGAVVYIIEKDKI 690
D + V ++ ++++
Sbjct: 263 DVKTKDNLEVCVMRENQV 280
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +V+ + + V +A D + N +VF++ + +G G D Q++ + +
Sbjct: 57 GTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNI 116
Query: 307 KFRMNLYEL-KENRMMRPKTFSAMLSNLLYER--RFGPYFIEPVIAGLDPYDNQPYVCNM 477
+M + +N M+PK+ ++ ++ +LY R R P +I+ V+ G+D + PY+ N+
Sbjct: 117 DQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVD-NEGTPYLANV 175
Query: 478 DLIGCPNEPEDFVVS 522
DL G ED+VV+
Sbjct: 176 DLRG--RSYEDYVVA 188
>UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 239
Score = 54.0 bits (124), Expect = 3e-06
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 1/186 (0%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G ++AM V + TD R + S K+ + + V G A DTQ +
Sbjct: 23 GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIA 82
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD-PYDNQPYVCNMDL 483
K+ +++Y + EN+ + S + LY R ++AG D Q Y
Sbjct: 83 KYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR-EQLSASVLVAGWDEELGGQVYAIP--- 138
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
IG + SG+ S + G ++ W PNL +E + QA+ A RD SG
Sbjct: 139 IGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSSGGVVR 198
Query: 664 VYIIEK 681
+ +I K
Sbjct: 199 LAVINK 204
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 54.0 bits (124), Expect = 3e-06
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G ++A+ V + +D R V+ F K+ + +Y L G A D Q V
Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMA 79
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN-QPYVCNMDL 483
+++ L+ ++ + ++ N+ Y+ R ++AG D + Q Y
Sbjct: 80 AYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQVY----GT 134
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
+G + F + G+ S +YG +A ++P + P+E + A+ A RD S G V
Sbjct: 135 LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSS--GGV 192
Query: 664 VYII 675
+Y++
Sbjct: 193 IYLV 196
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 53.6 bits (123), Expect = 5e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+ G V+A+ V +A D R +S + K+ Q+ + G D + +
Sbjct: 35 NSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYADFIALRKF 94
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L+ R+ LYE + +T + +LS LY RRF PY+ ++AGLD +N V D
Sbjct: 95 LQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDE-NNHGVVYGYDA 153
Query: 484 IG 489
IG
Sbjct: 154 IG 155
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 52.0 bits (119), Expect = 1e-05
Identities = 51/193 (26%), Positives = 83/193 (43%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G + Q V +A D R + S K+ Q+ L + G A D + L
Sbjct: 79 GTTTLGFIYQGGVILAVDSRASQGSYIASQEVKKIIQINDFLLGTMAGGAADCSYWERVL 138
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
LYEL+ + S M++N+ + R +IAG D + P++ +D
Sbjct: 139 SKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFD--KDGPHLYYVDNE 196
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G + F V G+ S YG+ ++ + +L +E + +A+V A +RD SG V
Sbjct: 197 GSRVKDCKFSV-GSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLVRV 255
Query: 667 YIIEKDKITXKHV 705
Y I K+ + KHV
Sbjct: 256 YQINKNGV-IKHV 267
>UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=3; Coelomata|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 268
Score = 50.8 bits (116), Expect = 3e-05
Identities = 46/187 (24%), Positives = 80/187 (42%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG +A Q V +A D R + S KV ++ P L + G A D +
Sbjct: 67 HGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERL 126
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L + +YEL+ + S +L+N++Y+ + + ++ G D P + +D
Sbjct: 127 LARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDK--RGPGLYYVDS 184
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
G + F V G+ S YG+ ++ +L +E E +A+ A RDA SG
Sbjct: 185 EGNRVCGDLFAV-GSGSMYAYGVMDSGLRHDLSVEEACELGRRAIYQATYRDAYSGGQVN 243
Query: 664 VYIIEKD 684
+Y + +
Sbjct: 244 LYHVHSE 250
>UniRef50_P22141 Cluster: Proteasome component C11; n=36;
Ascomycota|Rep: Proteasome component C11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 198
Score = 50.8 bits (116), Expect = 3e-05
Identities = 38/187 (20%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Frame = +1
Query: 136 VVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 315
++ + Q V +A+ K + + K Q+ P + G A DT + ++
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQAN 63
Query: 316 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 489
+ LY ++E+ + P+ S+ + L + R PY + +I G D N+P + +D +G
Sbjct: 64 IQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLG 123
Query: 490 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 669
E + G + + + + P++ +E + + + R + G +V
Sbjct: 124 TKVE-LPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVK 182
Query: 670 IIEKDKI 690
I++KD I
Sbjct: 183 IVDKDGI 189
>UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 294
Score = 50.0 bits (114), Expect = 6e-05
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQ 300
HG +A + + +A D R Q Q VS+ KV ++ P + + G+A D Q +
Sbjct: 81 HGTTTIAFCFRGGILLAVDSR-STQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWER 139
Query: 301 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 480
L + LYEL+ + + S + + L+ + + +I+G D N P + D
Sbjct: 140 DLGRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDS-TNHPCIYYCD 198
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGA 660
G +G+ S +G+ + ++ + ++ +A+ +A RDA+SG
Sbjct: 199 SEG-TRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGML 257
Query: 661 VVYII 675
VY+I
Sbjct: 258 NVYVI 262
>UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precursor;
n=43; Bilateria|Rep: Proteasome subunit beta type-6
precursor - Homo sapiens (Human)
Length = 239
Score = 50.0 bits (114), Expect = 6e-05
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 1/176 (0%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G ++A+ V + D R + + K+ + ++ G A DTQ V +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAV 93
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN-QPYVCNMDL 483
+++ + ++ N T +++ + Y R +IAG DP + Q Y M
Sbjct: 94 TYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPM-- 150
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 651
G + F + G+ S +YG +A + + +E + + AL A +RD SG
Sbjct: 151 -GGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSG 205
>UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative 20S proteasome
beta-subunit - Arthrobacter aurescens (strain TC1)
Length = 324
Score = 49.2 bits (112), Expect = 1e-04
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 4/180 (2%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
H +VA+ V +A D+R + S + KVF +G+ G A + +
Sbjct: 100 HATTIVALTYAGGVLMAGDRRATMGNIIASRHIEKVFPADEYSVLGIAGTAGLAIDITRL 159
Query: 304 LKFRMNLYELKENRMM----RPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVC 471
+ + YE E ++ + AM+ L G I P+ AG D +
Sbjct: 160 FQVELEHYEKIEGTLLSLVGKANRLGAMIRGNLPMAMQGMAVI-PLFAGFDQVAGVGRLF 218
Query: 472 NMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 651
+ D+ G E + G+ S G + LW+PNL ++ +AL +AAD D+ +G
Sbjct: 219 SYDVTGGRYEELEHHSVGSGSVFARGALKKLWKPNLSEEDAISVAVEALYDAADDDSATG 278
>UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 252
Score = 48.4 bits (110), Expect = 2e-04
Identities = 43/187 (22%), Positives = 79/187 (42%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG ++M + + +A D R A S + K + + + G A D +
Sbjct: 37 HGTTTLSMIIKEGIIVAVDSRATRGAFISSGSVQKYIPITSHIIGTMAGGAADCAYWERE 96
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L + L+EL+ + S ML+N+LY+ R + +I G D P++ ++
Sbjct: 97 LTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICGYD--KTGPHIFYVE- 153
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
G P G+ S + ++ ++ N+ ++ E +A+ +A RD SG
Sbjct: 154 DGGVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASGGNVN 213
Query: 664 VYIIEKD 684
V I+KD
Sbjct: 214 VIFIDKD 220
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 48.4 bits (110), Expect = 2e-04
Identities = 46/194 (23%), Positives = 79/194 (40%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +V + CV + D R + K+ ++ ++ G A D V +
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAADLDHVTSLI 100
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ + L +L+ NR R +MLS+ LY+ + G ++AG D N +V +
Sbjct: 101 EGNLELQKLQMNRKPRVAHAVSMLSDHLYKYQ-GYIGAHLIVAGSDSTGN--FVFQVSAN 157
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
GC + F G+ S + EA + L E E +S A+ D SG +
Sbjct: 158 GCIMQ-LPFTSMGSGSLCARSILEARYRDGLTESECVELVSDAIRAGIYNDLYSGSNVNI 216
Query: 667 YIIEKDKITXKHVK 708
II+ + + KH +
Sbjct: 217 LIIKNNYV--KHFR 228
>UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8;
Magnoliophyta|Rep: 20S proteasome beta subunit - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 238
Score = 46.8 bits (106), Expect = 5e-04
Identities = 38/135 (28%), Positives = 65/135 (48%)
Frame = +1
Query: 271 LATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPY 450
+A D Q + L + L+EL R + S +L+N+LY R + +IAG D
Sbjct: 69 VAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-- 126
Query: 451 DNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAA 630
+ P + +D G + F V G+ S YG+ ++ ++ ++ +E E +A+ +A
Sbjct: 127 ETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHAT 185
Query: 631 DRDAISGWGAVVYII 675
RD SG A VY +
Sbjct: 186 FRDGASGGVASVYYV 200
>UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium yoelii yoelii
Length = 287
Score = 46.8 bits (106), Expect = 5e-04
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +A + + +A D R + + S N K+ ++ + + G A D + L
Sbjct: 59 GTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKYILGTMAGGAADCFYWEKYL 118
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ +YEL+ N + + S +LSN+LY+ + +++G YD+ + NM I
Sbjct: 119 GQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSG---YDHTGF--NMFYI 173
Query: 487 GCPNEPED--FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGA 660
+ + G+ S Y + ++ ++ NL ++ E A+ +A RD SG
Sbjct: 174 DDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSGGKV 233
Query: 661 VVYIIEKD 684
V+ I K+
Sbjct: 234 RVFYIHKN 241
>UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 256
Score = 46.8 bits (106), Expect = 5e-04
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG ++ + +A D R S K+ + P + + G A D Q +
Sbjct: 52 HGTTTLSFIYNGGIVVAVDSRATGGQFIFSQTVMKILPLAPNMIGTMAGGAADCQYWLRN 111
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQ-PYVCNMD 480
L + L++ + + + S +L N LY + I +I G YDN P++ +D
Sbjct: 112 LSRLIQLHKFRYQQPLTVAAASKILVNELYRYKGYNLSIGSMICG---YDNTGPHIFYID 168
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWG- 657
G + F V G+ S YG+ + + ++ +E E +A+ +A RD+ SG
Sbjct: 169 NHGSRIAGKRFSV-GSGSTHAYGVLDTCYREDMTKEEACELGRRAIYHATYRDSGSGGRV 227
Query: 658 AVVYIIE 678
+VV+I +
Sbjct: 228 SVVHITQ 234
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQ-MGPTLYVGLPGLATDTQTVFQR 303
GG+ A+ G+ +A+D R + T + Q + + + G D + +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L+ R++ Y M + +LS LY RRF PY+ ++AG+D + + V + D
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEH-GKGAVFSYDP 169
Query: 484 IGC 492
IGC
Sbjct: 170 IGC 172
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 46.4 bits (105), Expect = 7e-04
Identities = 35/165 (21%), Positives = 70/165 (42%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG V+A+ G +A+D R + S ++ ++ +G G+ +D + Q+
Sbjct: 36 NGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRILKISNLCLLGSSGMISDINILHQK 95
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L+ + + N + + S+LLY RRF P++ ++ G++ D
Sbjct: 96 LRNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINELGKASNY-TYDA 154
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQAL 618
IG + V G C + + + E + D ++TI Q +
Sbjct: 155 IGSFDCNHASTV-GNCQSSAQCIMDYIEERKIPNDRNYKTILQVV 198
>UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5;
Oligohymenophorea|Rep: Proteasome, putative -
Tetrahymena thermophila SB210
Length = 297
Score = 46.4 bits (105), Expect = 7e-04
Identities = 47/181 (25%), Positives = 72/181 (39%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +A Q V +A D R + S K+ ++ L + G A D Q Q L
Sbjct: 74 GTTTLAFKFQGGVIVAVDSRASQGSFDASETVRKIIEINDQLLGTMAGGAADCQFWEQYL 133
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
Y+L+ + S +L N+LY R + ++ G D Q Y + D
Sbjct: 134 AIECRKYQLQNREKVSVAAASRILINILYSYRNHGLSMGCMLTGWDHEGAQLYYLDND-- 191
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G + F G+ S YG+ + + NL E E +A+ +A RDA SG +
Sbjct: 192 GQRIKGNIF-SCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAIYHATHRDAGSGGVVRI 250
Query: 667 Y 669
Y
Sbjct: 251 Y 251
>UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4;
n=17; Ascomycota|Rep: Probable proteasome subunit beta
type-4 - Schizosaccharomyces pombe (Fission yeast)
Length = 262
Score = 46.4 bits (105), Expect = 7e-04
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +V+A+ V IA D + + ++ ++G VG G +D Q + QRL
Sbjct: 43 GSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQI-QRL 101
Query: 307 KFRMNLYE--LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCN 474
++ + E + ++P LS +LY RR PY+ + ++AG+D + +PYV
Sbjct: 102 LEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAF 161
Query: 475 MDLIG 489
DL G
Sbjct: 162 ADLRG 166
>UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 284
Score = 46.0 bits (104), Expect = 0.001
Identities = 40/163 (24%), Positives = 71/163 (43%)
Frame = +1
Query: 163 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 342
+ +A D R S + K+ +G + + G A D Q + + LYEL+E
Sbjct: 83 IIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREK 142
Query: 343 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 522
+ S +N LY R + ++AG D P + +D G + + V
Sbjct: 143 TSITVSAASKYFANTLYGYRGQGLSVGSMVAGYD--KKGPQIFKVDSEGDRCQLKVCSV- 199
Query: 523 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 651
G+ S YG+ + ++P + DE + +A+++A RD+ SG
Sbjct: 200 GSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSGSG 242
>UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 206
Score = 45.6 bits (103), Expect = 0.001
Identities = 37/175 (21%), Positives = 75/175 (42%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G ++A+ + I D R K+ + ++ G A DTQ + + +
Sbjct: 17 GTTIMAVIYDGGLIIGADSRTSSGQFVADRCADKIDYIHDRIFCLRSGAAADTQIITKHV 76
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
++ ++ + + R+ T + + N LYE + ++AG DPY P + + L
Sbjct: 77 RYYVDAHAQELGRLPAVATAANLFRNFLYEYK-DSMSASIIVAGWDPYKG-PQIFTLPLG 134
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 651
G E + + + G+ S ++G C++ ++ L + A+ +A RD SG
Sbjct: 135 GSVIE-QKWSIGGSGSTFIWGFCDSNYQSMLNQIMSRTFVLHAVAHAMFRDGSSG 188
>UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit beta
type 6, NTN hydrolase fold; n=3; Cryptosporidium|Rep:
Pre3p/proteasome regulatory subunit beta type 6, NTN
hydrolase fold - Cryptosporidium parvum Iowa II
Length = 248
Score = 44.4 bits (100), Expect = 0.003
Identities = 40/188 (21%), Positives = 85/188 (45%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +VA+ + + +A D R K+ Q+ +++ G A DTQ + + +
Sbjct: 51 GTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQITDKVFMCRSGSAADTQIISRYV 110
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ + +EL+ + K+ +++ + Y+ + + +IAG+DP + + V + L
Sbjct: 111 RRIVQDHELETGEDTKVKSVASVARLISYQNK-EHLLADMIIAGMDP-NGEFKVFRIPLG 168
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G E + +SG+ S +Y M ++ + + DE + +A RD+ SG +
Sbjct: 169 GTLIEGS-YAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSGGIIRI 227
Query: 667 YIIEKDKI 690
+I K +
Sbjct: 228 IVINKSGV 235
>UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 124
Score = 44.4 bits (100), Expect = 0.003
Identities = 34/92 (36%), Positives = 39/92 (42%)
Frame = -3
Query: 461 GWLS*GSRPAMTGSIK*GPKRRSYNKFDNIAENVLGRIILFSFNSYKFILNFSL*NTVWV 282
G LS PA G GP SYN NV G I+ S N YK +LN +
Sbjct: 3 GLLSLLLNPATMGLTNQGPNLLSYNDELTKFANVDGSILRSSRNLYKLVLNLNNSFKEIT 62
Query: 281 SVARPGRPTYNVGPIWNTFGKLVDTV*ACIPN 186
SVA P P + P F KL+ T C PN
Sbjct: 63 SVANPVNPKKVLSPTSKIFSKLLLTPSDCCPN 94
>UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2;
n=2; Filobasidiella neoformans|Rep: Probable proteasome
subunit beta type-2 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 224
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +1
Query: 145 MXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 324
+ G+ V +A+D G + ++ K+ +GP L + G DT + ++ M L
Sbjct: 7 ITGKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRL 66
Query: 325 YELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 489
Y ++ + + P SA + L E R PY + ++ G D ++P++ +D +G
Sbjct: 67 YNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLG 123
>UniRef50_A3EPC3 Cluster: Putative proteasome A-type and B-type;
n=1; Leptospirillum sp. Group II UBA|Rep: Putative
proteasome A-type and B-type - Leptospirillum sp. Group
II UBA
Length = 280
Score = 43.6 bits (98), Expect = 0.005
Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 3/179 (1%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG V+A+ + V +A D++ Q K+F + T V + G A + +
Sbjct: 57 HGTTVLALTTRTGVVMAADRQASEGYQVADRAIQKIFPVDRTSAVAIAGAAGPAIEMARL 116
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYER---RFGPYFIEPVIAGLDPYDNQPYVCN 474
+ + YE E + + L ++ + + P+ AG D +
Sbjct: 117 FRVEIEHYEKLEGVALSLLGKANKLGQMVRDHLPLALQGLLVVPLYAGYDTRSGTGRIFK 176
Query: 475 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 651
D G E + F +G+ + + L+ P ++ E T +AL AAD D +G
Sbjct: 177 YDAAGGRYEEDTFHSNGSGGLFARNVLKMLYRPGMEEAEAVSTALRALYEAADDDLATG 235
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 43.2 bits (97), Expect = 0.006
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV--- 294
+GG V+ + G V +A D R + + N PK+ ++ +G G+ +D +T+
Sbjct: 38 NGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 295 ---------------------FQR-LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFG 408
F + L+ ++ L+ L+ + + +L LY RRF
Sbjct: 98 LQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFF 157
Query: 409 PYFIEPVIAGLDPYDNQPYVCNMDLIG--------CPNEPEDFV--VSGTCSEQLYGMCE 558
PY+ ++AG+D + + + + D IG C + + EQ + +
Sbjct: 158 PYYTFNILAGIDE-NGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLIK 216
Query: 559 ALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIE 678
+ + NL+ D F + A+ +A +RD +G A +YII+
Sbjct: 217 NM-DFNLRDDINF--VKDAMTSATERDIYTGDKAEIYIID 253
>UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1;
Ustilago maydis|Rep: Proteasome subunit beta type -
Ustilago maydis (Smut fungus)
Length = 266
Score = 42.7 bits (96), Expect = 0.009
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +V+ + + + +ATD + + ++ Q G +G G +D Q V L
Sbjct: 48 GTSVLGIKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASGDMSDWQYVQHML 107
Query: 307 KFRMNLYELK-ENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNM 477
+ ++ + + P A L+ ++Y+RR P + V+ G+DP D P++ +
Sbjct: 108 NKLITSEDVAADGHNLTPTQIYAYLARVMYQRRSKINPLWNSFVLGGVDPKDGTPFLGYV 167
Query: 478 DLIG 489
DL+G
Sbjct: 168 DLLG 171
>UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4;
Endopterygota|Rep: Proteasome subunit beta type -
Anopheles gambiae str. PEST
Length = 271
Score = 42.3 bits (95), Expect = 0.011
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +VV + + V IA DK + + +V+++ +G+ G D Q + + +
Sbjct: 58 GTSVVGLMFKDGVIIAADKLISYGSLARFHDVDRVYRINDKTVLGIGGDFADFQYIKRHI 117
Query: 307 KFRMNLYE-LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNM 477
++ + L + M+P++F L+ ++Y RR F P +++ VI G+ D +P++ ++
Sbjct: 118 DQKVIDDQCLDDKNEMKPRSFYNWLTRVMYNRRSEFQPLYLDLVIGGMQ--DGEPFLGHV 175
Query: 478 DLIG 489
+L G
Sbjct: 176 NLRG 179
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 41.9 bits (94), Expect = 0.015
Identities = 34/112 (30%), Positives = 54/112 (48%)
Frame = +1
Query: 349 MRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGT 528
M +AMLS +LY RRF PY+ ++AGLD P + + IG N+ E +V
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGELPTISSG--IGGKNQ-EGWVK--- 54
Query: 529 CSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 684
EP + D+ + ++AA+RD +G G V++++ KD
Sbjct: 55 -------------EP-IPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKD 92
>UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_66910_67563 - Giardia lamblia
ATCC 50803
Length = 217
Score = 41.9 bits (94), Expect = 0.015
Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 2/182 (1%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
GG VVA+ + V +A D + + N+ ++ +G +G G D + L
Sbjct: 7 GGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTGDEADFKDSLYTL 66
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNMD 480
K + L+ Y R P + +I G +P ++ PY+ +D
Sbjct: 67 KSMHREARCHGTPPPSTREIHGFLATRNYSSRLEMDPIYNGYIIGGCEPGES-PYIGVVD 125
Query: 481 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGA 660
L G F +G + W+P + DE + ++L A DA +G
Sbjct: 126 LRG-TQFTASFFATGMGRHYALPVLREGWKPGISKDEAVALLLESLKTLAFNDAAAGSSF 184
Query: 661 VV 666
++
Sbjct: 185 II 186
>UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-7;
n=3; Ascomycota|Rep: Probable proteasome subunit alpha
type-7 - Schizosaccharomyces pombe (Fission yeast)
Length = 259
Score = 41.9 bits (94), Expect = 0.015
Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +A+ G C+ I +++ + Q VS NF K+ + + + GL D + + +
Sbjct: 30 GTTAIALRGNECIVIGVERKNVPKLQNVS-NFQKIAMVDNHVCLAFAGLNADARILIDKA 88
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 474
+ ++L + + + ++ + Y + G P+ + +IAG D DN P V
Sbjct: 89 RVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQ 148
Query: 475 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALV 621
+ G N + + G S+ E W+ L DE +L+
Sbjct: 149 TEPAGIYNAWKATAI-GRASKAAREYLEKNWKEGLSRDETIHLAVSSLL 196
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 41.5 bits (93), Expect = 0.020
Identities = 41/185 (22%), Positives = 74/185 (40%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +V + + V + D R N K+ M P +Y G A DT+ V +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 98
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
++ L+ + R R T +L L+ + G V+ G+D P++ +
Sbjct: 99 SSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQ-GHVSAALVLGGVD--ITGPHLHTIYPH 155
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G + F G+ S + EA ++ L DE + +++A+ + D SG +
Sbjct: 156 G-STDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDI 214
Query: 667 YIIEK 681
+I K
Sbjct: 215 CVITK 219
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 41.1 bits (92), Expect = 0.026
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +1
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
LK R +Y+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 3 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKGCVFTYDA 61
Query: 484 IG 489
+G
Sbjct: 62 VG 63
>UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beta 2 subunit, putative -
Babesia bovis
Length = 218
Score = 40.7 bits (91), Expect = 0.035
Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 2/193 (1%)
Frame = +1
Query: 136 VVAMXGQACVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQRLKF 312
++ + G VAIA D T+ + K+ ++G + + L G D + +K
Sbjct: 5 LIGIKGPDFVAIACDTYEKYSIITIKNDDESKIMKIGDSKVMMLAGPLGDRSQFSKMIKA 64
Query: 313 RMNLYELKENRMMRPKTFSAMLSNLLYER-RFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 489
++ ++ K ++ + + + L E R PY ++ +IAG+D + P + +D +
Sbjct: 65 TLDYHKYKNSKELSTNAAAHFVRLELAEYLRQSPYQVDMLIAGID--QDGPKLFWIDYLA 122
Query: 490 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 669
+ D V G L G+ + ++PN+ +E + + +R IS
Sbjct: 123 SCTQA-DTAVHGYGGFLLRGLLDKEYKPNMTREEAIALLKKCRHEVQNRFLISQSNFAAK 181
Query: 670 IIEKDKITXKHVK 708
II+KD + +K
Sbjct: 182 IIDKDGVHDVDIK 194
>UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 191
Score = 39.9 bits (89), Expect = 0.060
Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 3/177 (1%)
Frame = +1
Query: 163 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRM--NLYELK 336
V ++ D R + V PKV + +Y + G + Q + ++ + +L
Sbjct: 7 VLLSADTRATMGNLVVDRFIPKVLPITDKIYTCIAGSVSHAQFLVNEVRAHLMTQQMDLH 66
Query: 337 EN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 513
N M P +A +Y ++ + I G DN + C +IG ED+
Sbjct: 67 ANLNGMDPMVATAANIISIYLHKYREFLHAAFILG--GVDNTGFHCINSMIGGSVLEEDY 124
Query: 514 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 684
+SG+ + G+ + L+ P L E + L A D SG +E+D
Sbjct: 125 AISGSGGVFIKGLMKELYRPELTRTEAINLAHKLLKTAISLDTKSGGFMRFVAVEQD 181
>UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family
protein; n=2; Alveolata|Rep: Proteasome A-type and
B-type family protein - Tetrahymena thermophila SB210
Length = 282
Score = 39.9 bits (89), Expect = 0.060
Identities = 40/186 (21%), Positives = 71/186 (38%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +V + + V + D R + K+ + P +Y G A DTQ V RL
Sbjct: 40 GTTIVGLVYKDGVVLGADTRATAGTIVAEKSCSKIHYIAPNMYCCGAGTAADTQWVTDRL 99
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
+ L L NR R A L LY+ + G ++ G D P + ++
Sbjct: 100 SSELELMRLNTNRQSRIAGAIARLREHLYQYQ-GHVGAHLILGGFD--CQGPQLVSVAAH 156
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G + + C + E+ + +L E + ++ ++ + D SG V
Sbjct: 157 GSFSYLPYATMGSGCLAAI-ATLESRYRDDLTEQEAIDLVTASIESGIVHDLGSGSNVDV 215
Query: 667 YIIEKD 684
+I++D
Sbjct: 216 CVIKRD 221
>UniRef50_A5LHX3 Cluster: Proteasome subunit beta type-11 precursor;
n=17; Euteleostomi|Rep: Proteasome subunit beta type-11
precursor - Homo sapiens (Human)
Length = 300
Score = 39.1 bits (87), Expect = 0.11
Identities = 39/176 (22%), Positives = 72/176 (40%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG +A + V A D R + KV + L G + D T ++
Sbjct: 48 HGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRV 107
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L+ + L EL+E ++ + + +LS ++ + R + + G D + + D
Sbjct: 108 LQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSD- 166
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 651
G + + F V G+ S YG+ + + ++ E + A+ +A RDA SG
Sbjct: 167 -GTRLQGDIFSV-GSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSG 220
>UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1;
Ajellomyces capsulatus NAm1|Rep: Proteasome component
PRE3 - Ajellomyces capsulatus NAm1
Length = 174
Score = 38.7 bits (86), Expect = 0.14
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +1
Query: 427 VIAGLDP-YDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFET 603
+IAG D + Q Y ++ L G ++ + + + G+ S +YG C+A W + +E E
Sbjct: 72 IIAGYDARHGGQVY--SIPLGGSLHK-QSYAIGGSGSTYIYGYCDANWREGMTEEEGIEF 128
Query: 604 ISQALVNAADRDAISGWGAVVYIIEKDKITXKHV 705
+ +L A D SG G + ++ +K +H+
Sbjct: 129 VKNSLQEAIKWDGSSG-GVIRMVVLTEKGAVRHL 161
>UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Coenzyme Q-binding protein COQ10,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 207
Score = 37.5 bits (83), Expect = 0.32
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 313 RMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGC 492
R Y L++ P T A +S + + F PY ++ + +P DN+P + + +G
Sbjct: 42 REQRYVLRKAINAPPSTVYAAVSEVAQYKEFIPYCVDSFVDKRNPVDNKPLIAGL-RVGF 100
Query: 493 PNEPEDFVVSGTCSE 537
E+F+ + TC +
Sbjct: 101 KQYDEEFICNVTCKD 115
>UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 36.3 bits (80), Expect = 0.74
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG + + V IA D R S + KV ++ P L + G A D +
Sbjct: 69 HGTTTLGFKFEHGVVIAVDSRATAGPYIASQSVKKVIEINPYLLGTMAGGAADCAFWERV 128
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLY 393
L + +YEL+ + S +L+N+LY
Sbjct: 129 LAEQCRIYELRNKERISVAAASKLLANMLY 158
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 36.3 bits (80), Expect = 0.74
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +1
Query: 427 VIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETI 606
+IAG D P V + L G E F V G+ S +YG C+ + N+ +E +
Sbjct: 157 IIAGYDRKLG-PQVYGIPLGGAMME-NPFTVGGSGSAYIYGWCDDTFRENMSKEEAQAWV 214
Query: 607 SQALVNAADRDAISG 651
+A+ A RDA SG
Sbjct: 215 KRAISLAIARDASSG 229
>UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome
subunit beta type 4 precursor (Proteasome beta chain)
(Macropain beta chain) (Multicatalytic endopeptidase
complex beta chain) (Proteasome chain 3); n=1; Apis
mellifera|Rep: PREDICTED: similar to Proteasome subunit
beta type 4 precursor (Proteasome beta chain) (Macropain
beta chain) (Multicatalytic endopeptidase complex beta
chain) (Proteasome chain 3) - Apis mellifera
Length = 256
Score = 35.9 bits (79), Expect = 0.98
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +VV + + + IATD + N +V ++ + +G G D Q + +
Sbjct: 49 GTSVVGIQFKNGILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDYADYQCLKSHI 108
Query: 307 KFRMNLYE-LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLD 444
+ ++ E L + ++PK L+ +LY RR F P++ +I GL+
Sbjct: 109 ERKILEEECLDDGLSLKPKALHCWLTRVLYNRRSQFDPFWNNFIIGGLE 157
>UniRef50_Q09544 Cluster: ATP synthase delta chain, mitochondrial
precursor; n=2; Caenorhabditis|Rep: ATP synthase delta
chain, mitochondrial precursor - Caenorhabditis elegans
Length = 163
Score = 35.9 bits (79), Expect = 0.98
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 511 FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
FV SGT S + G C+ L E LK +E+ E+ ++A ++AA R SG G+ V
Sbjct: 91 FVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQR--ASGEGSEV 140
>UniRef50_A2QVK6 Cluster: Catalytic activity: PRE2 has a
chymotrypsin-like proteolytic activity; n=7;
Trichocomaceae|Rep: Catalytic activity: PRE2 has a
chymotrypsin-like proteolytic activity - Aspergillus
niger
Length = 379
Score = 35.5 bits (78), Expect = 1.3
Identities = 27/119 (22%), Positives = 57/119 (47%)
Frame = +1
Query: 328 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 507
+++ R + S +L+NL Y + + ++AG+ P + P + +D G P
Sbjct: 232 QIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEG-PALYYIDSDGT-RLPG 289
Query: 508 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 684
+ G+ YG+ +A + +L +E E ++++ A RDA SG +Y ++++
Sbjct: 290 NLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 348
>UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40;
Fungi/Metazoa group|Rep: Proteasome subunit beta type-2
- Homo sapiens (Human)
Length = 201
Score = 35.5 bits (78), Expect = 1.3
Identities = 35/187 (18%), Positives = 77/187 (41%), Gaps = 2/187 (1%)
Frame = +1
Query: 136 VVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 315
++ + G V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 316 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 489
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYLA 122
Query: 490 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 669
+ F G + + + + P + + E + + L R ++ V
Sbjct: 123 ALAK-APFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 670 IIEKDKI 690
II+K+ I
Sbjct: 182 IIDKNGI 188
>UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 3728
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 163 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+++ T + +G ++ VST+ P + GP L V L LATDT + R
Sbjct: 2017 LSVTTQQYYGALSRLVSTSLPAIDSGGPLLPVHLSSLATDTLSYILR 2063
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 34.7 bits (76), Expect = 2.3
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G VV+ + + + D R + ++F++G +G+ G +D Q + + L
Sbjct: 16 GTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLVKTL 75
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPY---DNQPYVC 471
+ ++NR + PK + M+ +LY R P + + GL+ D + +
Sbjct: 76 ----TILTQEDNRRIDPKGYHKMIQRILYSARSKISPLNLSVCVGGLNAASDGDRRTHT- 130
Query: 472 NMDLIGCPNEPEDFVVS 522
++GC N +F S
Sbjct: 131 REKMLGCVNHLGNFYFS 147
>UniRef50_Q6CGU2 Cluster: Yarrowia lipolytica chromosome A of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome A of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 362
Score = 34.7 bits (76), Expect = 2.3
Identities = 31/92 (33%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = -3
Query: 665 TTAPQPEMASRSAAFTRACEIVSKSSSGFKLGSQRASHIPYSCSE-QVPDTTKSSGSFGQ 489
+TA P AS SAA T + S +S+ P S S Q P TT +S S
Sbjct: 129 STATTPSSASSSAAATSSSSSSSTEQPSSSSSDDTSSNTPSSTSSTQPPSTTTTSTSSSD 188
Query: 488 PIKSMLQT*GWLS*GSRPAMTGSIK*GPKRRS 393
S T G S S TGS P R S
Sbjct: 189 SSSSTDSTTGSTSSDSTSHTTGSPTTSPTRTS 220
>UniRef50_Q4SM94 Cluster: Chromosome 3 SCAF14553, whole genome shotgun
sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1679
Score = 34.3 bits (75), Expect = 3.0
Identities = 21/65 (32%), Positives = 25/65 (38%)
Frame = -1
Query: 637 HDLPHSPEPVRLSQRVHLASSWAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPCYRHKV 458
H PH P SQ + P +T H V P LQ LG S RH+
Sbjct: 1207 HSYPHRPASPEGSQVNVMGVHMVPGSPNTLHRTVATNTPPSPALQRRLGQASPSLARHQQ 1266
Query: 457 GYHRD 443
G +RD
Sbjct: 1267 GPNRD 1271
>UniRef50_UPI0000F2C314 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 384
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQ 459
+K R+ L L +R+M P S+ +++ FGP P++AG P D Q
Sbjct: 1 MKTRLALLPLARSRLMSPSPASSQAAHVCAHGTFGPGLDPPLLAGGFPKDKQ 52
>UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;
Corynebacterineae|Rep: 20S proteasome, A and B subunits
- Mycobacterium sp. (strain KMS)
Length = 304
Score = 33.1 bits (72), Expect = 6.9
Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 11/187 (5%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
HG +VA+ V +A D+R S + KV+ G+ G A +
Sbjct: 64 HGTTIVALKFPGGVVMAGDRRATQGNMIASRDVQKVYITDDYTATGIAGTAAIAVEFARL 123
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNL--LYERRFGP----YFIEPVIAGLDPYDNQPY 465
+ YE E + TF+ ++ L + G + P++AG D D P
Sbjct: 124 YAVELEHYEKLEGVAL---TFAGKVNRLATMVRGNLGAALQGFVALPLLAGFDLDDPDPQ 180
Query: 466 ----VCNMDLIGCPN-EPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAA 630
+ + D G N E E F G+ S + L+ D +AL +AA
Sbjct: 181 AAGRIVSFDAAGGHNLEEEGFQSVGSGSIFAKSSMKKLYHQVTDADSALRVAVEALYDAA 240
Query: 631 DRDAISG 651
D D+ +G
Sbjct: 241 DDDSATG 247
>UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6; n=1; Apis
mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6 - Apis
mellifera
Length = 209
Score = 32.7 bits (71), Expect = 9.2
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 490 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 669
C +P + G+ S +YG ++ ++PN+ +E + + L A RD SG +
Sbjct: 129 CVRQP--ISIGGSGSTYVYGYMDSQYKPNMSKNECVKLVENTLALAMSRDGSSGGVIRIG 186
Query: 670 IIEKDKITXK 699
+I I K
Sbjct: 187 VITNKGIERK 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,713,271
Number of Sequences: 1657284
Number of extensions: 15343579
Number of successful extensions: 39876
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 38493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39819
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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