Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_I15
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 241 5e-64
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 235 3e-62
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 59 4e-09
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364... 58 9e-09
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 52 5e-07
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 42 4e-04
06_01_0387 - 2770387-2770514,2770963-2771063,2771152-2771255,277... 38 0.008
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 34 0.097
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 33 0.17
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 30 2.1
01_03_0168 - 13397297-13397756,13397852-13397917,13397999-13398111 29 4.8
01_06_0106 - 26516930-26517349,26517474-26517905,26517981-265180... 28 6.4
01_03_0185 - 13565903-13565932,13565933-13566013,13566104-135661... 28 6.4
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 28 8.4
08_01_0319 + 2848751-2848762,2849516-2850449,2850476-2851234,285... 28 8.4
03_01_0398 + 3092577-3093857 28 8.4
01_06_1596 - 38514278-38514346,38514547-38514705,38514776-385148... 28 8.4
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 241 bits (589), Expect = 5e-64
Identities = 107/184 (58%), Positives = 146/184 (79%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+G AVVAM G+ C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD QT++QR
Sbjct: 120 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 179
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L FR LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL DN+P++C MD
Sbjct: 180 LVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPFICTMDC 238
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
IG +DFVVSGT SE LYG CE++++PN++P+ELFETISQAL ++ DRD +SGWG
Sbjct: 239 IGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLSGWGGF 298
Query: 664 VYII 675
V ++
Sbjct: 299 VLLV 302
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 235 bits (574), Expect = 3e-62
Identities = 105/195 (53%), Positives = 148/195 (75%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+G AVVAM G+ C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD QT++QR
Sbjct: 16 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 75
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L FR LY+L+E R M+P+ F++++S LLYE+RFGPYF +PVIAGL D +P++C MD
Sbjct: 76 LVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDND-EPFICTMDC 134
Query: 484 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 663
IG +DFVVSGT SE LYG CE++++P+++P+ELFETISQAL + DRD +SGWG
Sbjct: 135 IGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDCLSGWGGY 194
Query: 664 VYIIEKDKITXKHVK 708
V ++ ++ + +K
Sbjct: 195 VLLVTPTEVQERVIK 209
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/122 (27%), Positives = 58/122 (47%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG VA+ G +A D R + ++ + K+ ++ + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 483
L R LY+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS-EGKGCVFTYDA 130
Query: 484 IG 489
+G
Sbjct: 131 VG 132
>08_02_1353 +
26335306-26335448,26336025-26336106,26336322-26336451,
26336486-26336548,26336549-26336691,26336827-26336913,
26337014-26337088
Length = 240
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/107 (28%), Positives = 50/107 (46%)
Frame = +1
Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
+GG VA+ G +A D R + +S + K+ + + G D + + +
Sbjct: 10 NGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQRN 69
Query: 304 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 444
L + LYE N+ M + +LSN LY +RF PY+ V+ GLD
Sbjct: 70 LTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 116
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 52.0 bits (119), Expect = 5e-07
Identities = 39/191 (20%), Positives = 82/191 (42%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +V + V +A D R + K+ Q+ +YV G A DTQ + + +
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYV 84
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
++ ++ + ++ + K + ++ L Y+ + ++ G D Y+ + ++ L
Sbjct: 85 RYFLHQHTIQLGQPATVKVAANLIRLLAYQNK-NMLQAGMIVGGWDKYEG-GQIFSVPLG 142
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G + F + G+ S LYG+ + W+ + +E + + + + A RD SG
Sbjct: 143 GTILR-QPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARDGASGGVVRT 201
Query: 667 YIIEKDKITXK 699
I D ++ K
Sbjct: 202 VTINADGVSRK 212
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 42.3 bits (95), Expect = 4e-04
Identities = 42/187 (22%), Positives = 74/187 (39%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G +V + Q V + D R N K+ M P +Y G A DT+ V +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 97
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 486
++ L+ R R T +L + L+ + G V+ G+D P++ +
Sbjct: 98 SSQLQLHRYATGRESRVVTSLTLLKSHLFSYQ-GHVSAALVLGGVDV--TGPHLHTVYPH 154
Query: 487 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 666
G + F G+ S + E+ ++ L +E + +++A+ D SG V
Sbjct: 155 G-STDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVAEAIRGGIFNDLGSGSNVDV 213
Query: 667 YIIEKDK 687
+I K K
Sbjct: 214 CVITKGK 220
>06_01_0387 -
2770387-2770514,2770963-2771063,2771152-2771255,
2771345-2771507,2771550-2771596,2772818-2772946
Length = 223
Score = 37.9 bits (84), Expect = 0.008
Identities = 35/120 (29%), Positives = 53/120 (44%)
Frame = +1
Query: 310 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 489
F+ L+EL R + S +L+N+LY R I +IAG D + P + +D G
Sbjct: 67 FQCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWD--EKGPGLYYVDSEG 124
Query: 490 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 669
F V G+ S YG+ + + + +E E +A+ A RD SG VY
Sbjct: 125 ARLMGSRFSV-GSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVY 183
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 34.3 bits (75), Expect = 0.097
Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G A V + G V + +K+ + Q S + K+ + + + GL D + + R
Sbjct: 30 GNAAVGVRGSDTVVLGVEKKSTPKLQD-SRSVRKIASLDTHIALACAGLKADARVLINRA 88
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 474
+ + L + + + ++ L Y + G P+ + +I G DPY ++P +
Sbjct: 89 RVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQ 148
Query: 475 MDLIG 489
D G
Sbjct: 149 TDPSG 153
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Frame = +1
Query: 127 GGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 306
G A V + G V + +K+ + Q S + K+ + + + GL D + + R
Sbjct: 100 GNAAVGVRGTDTVVLGVEKKSTPKLQD-SRSMRKIASLDTHIALACAGLKADARVLINRA 158
Query: 307 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 474
+ + L + + + ++ L Y + G P+ + +I G DPY +P +
Sbjct: 159 RVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQ 218
Query: 475 MDLIG 489
D G
Sbjct: 219 TDPSG 223
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 598 ETISQALVNAADRDAISGWGAVVYIIEKDKITXK 699
E+I L+ AAD D + +VYI E DKIT K
Sbjct: 259 ESILYKLLAAADFDVAAAQQGIVYIDEVDKITKK 292
>01_03_0168 - 13397297-13397756,13397852-13397917,13397999-13398111
Length = 212
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 622 SPEPVRLSQRVHLASSWAPRELHTYHTAVQ 533
SP PV S R H+ +W P+ T+ + V+
Sbjct: 51 SPSPVATSNREHIIPNWVPQIEMTFSSVVE 80
>01_06_0106 -
26516930-26517349,26517474-26517905,26517981-26518058,
26518352-26518499,26518662-26518765,26518838-26518912,
26519195-26519261,26519352-26519356
Length = 442
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 3 CTPLCLLLKGHSIFCVHHFPVIP 71
C P+C LLK HS+ + H ++P
Sbjct: 411 CLPVCSLLKFHSLLFILHSHIMP 433
>01_03_0185 -
13565903-13565932,13565933-13566013,13566104-13566175,
13566800-13566932,13567068-13567107,13567192-13567258,
13567453-13567719
Length = 229
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 439 LDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEA 561
LD ++ +D+ PN+ E+ + C QLYG+ EA
Sbjct: 123 LDRFEEGAEQFRLDVAANPNDTEESIWCFLCEAQLYGVDEA 163
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = -1
Query: 613 PVRLSQRVHLASSWAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPCYRH 464
P+R + A++ A + +H +HT +++ QV G+ S+ H
Sbjct: 197 PLREREEAAAAAAAAAKRIHDHHTPAESKAEAASEPQVSAGDHSTQSSDH 246
>08_01_0319 +
2848751-2848762,2849516-2850449,2850476-2851234,
2851793-2851850,2851900-2852179
Length = 680
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 164 WPSLRTSGLVYKLKQYQPTSQKYSKWDPHCM*AFPVSRLTPKLY 295
W LRT+ + ++ TSQKYS+W P C P P LY
Sbjct: 589 WMDLRTTKGIIRVVA-GGTSQKYSQWLPACHLDSP-REFQPNLY 630
>03_01_0398 + 3092577-3093857
Length = 426
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 475 MDLIGCPNEPEDFVVSGTCSEQLY 546
++L P++P DFVVSG+ S++ +
Sbjct: 146 LNLCASPSDPADFVVSGSWSDKAF 169
>01_06_1596 -
38514278-38514346,38514547-38514705,38514776-38514898,
38514985-38515047,38515248-38515352,38515487-38515586,
38515716-38515786,38516329-38516385,38516830-38516907,
38516975-38517049,38517180-38517230,38517453-38517466,
38517516-38517616,38517703-38517764,38518346-38518372,
38518901-38519581
Length = 611
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 598 ETISQALVNAADRDAISGWGAVVYIIEKDKITXK 699
E+I Q L+ AA+ + + +VYI E DKIT K
Sbjct: 304 ESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKK 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,637,012
Number of Sequences: 37544
Number of extensions: 419646
Number of successful extensions: 1023
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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