Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I15
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    26   1.3  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    26   1.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.3  
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    23   9.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.5  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   9.5  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 398 RSYNKFDNIAENVLGRIILFSFN 330
           RS+ KF  +AE+V GR +L +F+
Sbjct: 82  RSFRKFKLVAESVNGRDVLTNFH 104


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -1

Query: 553 TYHTAVQNRCPIPQNLQVHLGNQSSPCYRHKVGYHRDLD 437
           T+HT  Q    I + +++H    S+P Y ++  +  DL+
Sbjct: 402 TFHTDQQFIYAIDKTVRLHAQRSSAPTYYYQFSFDGDLN 440


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = -1

Query: 634 DLPHSPEPVRLSQRVHLASSWAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPC 473
           ++P S     L  R+H   SW P        A Q    + Q +  H G ++S C
Sbjct: 738 EVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIVQAVTQLMPNHRGPKTSRC 791


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 517 VSGTCSEQLYGMCE 558
           V GTCS ++Y  CE
Sbjct: 13  VLGTCSGKIYNRCE 26


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 522  RYHKIFRFIWATNQVHVTDIRLVIIG 445
            +YHKI R   A   ++   +R  I+G
Sbjct: 1356 KYHKILRHAGAQLMINTMQLRFWIVG 1381


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +1

Query: 124 HGGAVVAMXGQACVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 303
           H GA  +      V +  D     +AQ +       ++M P +YV L     D Q   QR
Sbjct: 149 HMGATHSCVSPEPVNLLPDDELVKRAQWLLEKLGYPWEMMPLMYVILKSADGDVQKAHQR 208

Query: 304 L---KFRMNLYELKENRMM 351
           +   +  +++  L+  +M+
Sbjct: 209 IDEDRLEIHVNHLQARKML 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,176
Number of Sequences: 2352
Number of extensions: 16507
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)