Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I14
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.   122   5e-30
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   7.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   9.4  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score =  122 bits (293), Expect = 5e-30
 Identities = 66/167 (39%), Positives = 93/167 (55%)
 Frame = +1

Query: 253 IGEPLYPAHANVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLMIEAGDDPPSIANSP 432
           IGEP    H++   D SYDFI+VGGG+A  V+A RL+EV+NW VL++EAG D P+ A  P
Sbjct: 52  IGEPCQRVHSSRIPDLSYDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDEPAGAEIP 111

Query: 433 GYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYD 612
               +      +W Y+  N+  +       S    RGK LGG++  + M Y RG+R DY+
Sbjct: 112 SNLQLYLGGDLDWKYYTTNESHACLSTG-GSCYWPRGKNLGGTTLHHGMAYHRGHRKDYE 170

Query: 613 NWAENGNEGWDWNTVIQYFKKSERLDDNHILSSESAXLHGNKGYLGV 753
            W + G  GW W+ V+ Y+ KSE   +N  LS      H + G + V
Sbjct: 171 RWVQQGAFGWSWDEVMPYYLKSE---NNTELSRVGTKYHRSGGLMNV 214


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 563 VPSTLCFTSEGTGLITTIGPKTETKAGTGIQSFSTLRK 676
           +P+T+  T+  T   T     T T   TG+    TL++
Sbjct: 103 LPATITTTTTTTTTTTATAAATATTTATGLIKQETLQR 140


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = +1

Query: 121 LKSAKTFECVLIMFLQAIALFQVKILIPILEVIQLLIIALSSFE 252
           + + + F+ V I+F   +   ++   I  +EV+ +L    S F+
Sbjct: 414 IDTCEMFDSVSILFSDVVTFTEICSRITPMEVVSMLNAMYSLFD 457


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -2

Query: 423 SYAWRVVASFYHQHSPIGDF 364
           S +WR+  + ++ + P G F
Sbjct: 216 SRSWRITNNLFYPYPPYGTF 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,568
Number of Sequences: 438
Number of extensions: 3956
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)