Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I13
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z49074-3|CAA88894.1|  176|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z48583-6|CAA88474.1|  176|Caenorhabditis elegans Hypothetical pr...    29   5.5  

>Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.7 protein.
          Length = 329

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +1

Query: 511 RTESIK*NLKYDYLVYFGYLLNNIIKLSHESRLIERKCIWLISRKSIVF 657
           R ES+  N K   L+YF  ++  +       ++I++KCI+ +S K +++
Sbjct: 14  RLESL--NFKISQLIYFVLIITTLFFTFFALKVIQKKCIFQLSTKILLY 60


>Z49074-3|CAA88894.1|  176|Caenorhabditis elegans Hypothetical
           protein ZK971.1 protein.
          Length = 176

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 406 LLHFPNGYYLLIHTIYKIYFNIVL 335
           LL + N  Y +IHT+ KI  N+VL
Sbjct: 98  LLSYQNKNYKIIHTLIKIIINVVL 121


>Z48583-6|CAA88474.1|  176|Caenorhabditis elegans Hypothetical
           protein ZK971.1 protein.
          Length = 176

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 406 LLHFPNGYYLLIHTIYKIYFNIVL 335
           LL + N  Y +IHT+ KI  N+VL
Sbjct: 98  LLSYQNKNYKIIHTLIKIIINVVL 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,906,744
Number of Sequences: 27780
Number of extensions: 337120
Number of successful extensions: 727
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)