BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_I12
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57342-1|AAB08988.1| 248|Homo sapiens myelodysplasia/myeloid le... 94 5e-19
CR541700-1|CAG46501.1| 248|Homo sapiens MLF2 protein. 94 5e-19
BT019432-1|AAV38239.1| 248|Homo sapiens myeloid leukemia factor... 94 5e-19
BT019393-1|AAV38200.1| 248|Homo sapiens myeloid leukemia factor... 94 5e-19
BC002340-1|AAH02340.1| 248|Homo sapiens myeloid leukemia factor... 94 5e-19
BC000898-1|AAH00898.1| 248|Homo sapiens myeloid leukemia factor... 94 5e-19
AF070539-1|AAC28632.1| 248|Homo sapiens myelodysplasia/myeloid ... 94 5e-19
L49054-1|AAA99997.1| 268|Homo sapiens NPM-MLF1 protein. 90 7e-18
BC007045-1|AAH07045.1| 268|Homo sapiens myeloid leukemia factor... 90 7e-18
AY848702-1|AAX46017.1| 243|Homo sapiens myeloid leukemia factor... 90 7e-18
AK096889-1|BAC04885.1| 299|Homo sapiens protein ( Homo sapiens ... 90 7e-18
AK056948-1|BAB71320.1| 258|Homo sapiens protein ( Homo sapiens ... 90 7e-18
AY848701-1|AAX46016.1| 243|Homo sapiens myeloid leukemia factor... 87 6e-17
AY848700-1|AAX46015.1| 200|Homo sapiens myeloid leukemia factor... 78 3e-14
>U57342-1|AAB08988.1| 248|Homo sapiens myelodysplasia/myeloid
leukemia factor 2 protein.
Length = 248
Score = 93.9 bits (223), Expect = 5e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 496 NGKPQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGD 675
+G P+VY TS + P GI+ETR+T++DS +G ++M+IGHHI +R H+++R +N TGD
Sbjct: 115 DGAPKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGD 174
Query: 676 AEERQEFINLXXXXXXXFDREF 741
EERQ++INL FD E+
Sbjct: 175 QEERQDYINLDESEAAAFDDEW 196
>CR541700-1|CAG46501.1| 248|Homo sapiens MLF2 protein.
Length = 248
Score = 93.9 bits (223), Expect = 5e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 496 NGKPQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGD 675
+G P+VY TS + P GI+ETR+T++DS +G ++M+IGHHI +R H+++R +N TGD
Sbjct: 115 DGAPKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGD 174
Query: 676 AEERQEFINLXXXXXXXFDREF 741
EERQ++INL FD E+
Sbjct: 175 QEERQDYINLDESEAAAFDDEW 196
>BT019432-1|AAV38239.1| 248|Homo sapiens myeloid leukemia factor 2
protein.
Length = 248
Score = 93.9 bits (223), Expect = 5e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 496 NGKPQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGD 675
+G P+VY TS + P GI+ETR+T++DS +G ++M+IGHHI +R H+++R +N TGD
Sbjct: 115 DGAPKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGD 174
Query: 676 AEERQEFINLXXXXXXXFDREF 741
EERQ++INL FD E+
Sbjct: 175 QEERQDYINLDESEAAAFDDEW 196
>BT019393-1|AAV38200.1| 248|Homo sapiens myeloid leukemia factor 2
protein.
Length = 248
Score = 93.9 bits (223), Expect = 5e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 496 NGKPQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGD 675
+G P+VY TS + P GI+ETR+T++DS +G ++M+IGHHI +R H+++R +N TGD
Sbjct: 115 DGAPKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGD 174
Query: 676 AEERQEFINLXXXXXXXFDREF 741
EERQ++INL FD E+
Sbjct: 175 QEERQDYINLDESEAAAFDDEW 196
>BC002340-1|AAH02340.1| 248|Homo sapiens myeloid leukemia factor 2
protein.
Length = 248
Score = 93.9 bits (223), Expect = 5e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 496 NGKPQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGD 675
+G P+VY TS + P GI+ETR+T++DS +G ++M+IGHHI +R H+++R +N TGD
Sbjct: 115 DGAPKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGD 174
Query: 676 AEERQEFINLXXXXXXXFDREF 741
EERQ++INL FD E+
Sbjct: 175 QEERQDYINLDESEAAAFDDEW 196
>BC000898-1|AAH00898.1| 248|Homo sapiens myeloid leukemia factor 2
protein.
Length = 248
Score = 93.9 bits (223), Expect = 5e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 496 NGKPQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGD 675
+G P+VY TS + P GI+ETR+T++DS +G ++M+IGHHI +R H+++R +N TGD
Sbjct: 115 DGAPKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGD 174
Query: 676 AEERQEFINLXXXXXXXFDREF 741
EERQ++INL FD E+
Sbjct: 175 QEERQDYINLDESEAAAFDDEW 196
>AF070539-1|AAC28632.1| 248|Homo sapiens myelodysplasia/myeloid
leukemia factor 2 protein.
Length = 248
Score = 93.9 bits (223), Expect = 5e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 496 NGKPQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGD 675
+G P+VY TS + P GI+ETR+T++DS +G ++M+IGHHI +R H+++R +N TGD
Sbjct: 115 DGAPKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGD 174
Query: 676 AEERQEFINLXXXXXXXFDREF 741
EERQ++INL FD E+
Sbjct: 175 QEERQDYINLDESEAAAFDDEW 196
>L49054-1|AAA99997.1| 268|Homo sapiens NPM-MLF1 protein.
Length = 268
Score = 90.2 bits (214), Expect = 7e-18
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +1
Query: 505 PQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGDAEE 684
P+V+ +++ T+ P GIKETRK ++DS +G +KMAIGHHI +R HVI++ +N TGD E
Sbjct: 121 PKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV 180
Query: 685 RQEFINLXXXXXXXFDREF 741
QEFIN+ FD E+
Sbjct: 181 NQEFINMNESDAHAFDEEW 199
>BC007045-1|AAH07045.1| 268|Homo sapiens myeloid leukemia factor 1
protein.
Length = 268
Score = 90.2 bits (214), Expect = 7e-18
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +1
Query: 505 PQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGDAEE 684
P+V+ +++ T+ P GIKETRK ++DS +G +KMAIGHHI +R HVI++ +N TGD E
Sbjct: 121 PKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV 180
Query: 685 RQEFINLXXXXXXXFDREF 741
QEFIN+ FD E+
Sbjct: 181 NQEFINMNESDAHAFDEEW 199
>AY848702-1|AAX46017.1| 243|Homo sapiens myeloid leukemia factor 1
variant 3 protein.
Length = 243
Score = 90.2 bits (214), Expect = 7e-18
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +1
Query: 505 PQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGDAEE 684
P+V+ +++ T+ P GIKETRK ++DS +G +KMAIGHHI +R HVI++ +N TGD E
Sbjct: 96 PKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV 155
Query: 685 RQEFINLXXXXXXXFDREF 741
QEFIN+ FD E+
Sbjct: 156 NQEFINMNESDAHAFDEEW 174
>AK096889-1|BAC04885.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ39570 fis, clone SKMUS2001850, highly similar to
Homo sapiens t(3;5)(q25.1;p34) fusion gene NPM-MLF1
mRNA. ).
Length = 299
Score = 90.2 bits (214), Expect = 7e-18
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +1
Query: 505 PQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGDAEE 684
P+V+ +++ T+ P GIKETRK ++DS +G +KMAIGHHI +R HVI++ +N TGD E
Sbjct: 152 PKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV 211
Query: 685 RQEFINLXXXXXXXFDREF 741
QEFIN+ FD E+
Sbjct: 212 NQEFINMNESDAHAFDEEW 230
>AK056948-1|BAB71320.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ32386 fis, clone SKMUS1000118, highly similar to
Homo sapiens t(3;5)(q25.1;p34) fusion gene NPM-MLF1
mRNA. ).
Length = 258
Score = 90.2 bits (214), Expect = 7e-18
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +1
Query: 505 PQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGDAEE 684
P+V+ +++ T+ P GIKETRK ++DS +G +KMAIGHHI +R HVI++ +N TGD E
Sbjct: 111 PKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV 170
Query: 685 RQEFINLXXXXXXXFDREF 741
QEFIN+ FD E+
Sbjct: 171 NQEFINMNESDAHAFDEEW 189
>AY848701-1|AAX46016.1| 243|Homo sapiens myeloid leukemia factor 1
variant 2 protein.
Length = 243
Score = 87.0 bits (206), Expect = 6e-17
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +1
Query: 505 PQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGDAEE 684
P+V+ +++ T+ GIKETRK ++DS +G +KMAIGHHI +R HVI++ +N TGD E
Sbjct: 96 PKVFQASTQTRRASGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV 155
Query: 685 RQEFINLXXXXXXXFDREF 741
QEFIN+ FD E+
Sbjct: 156 NQEFINMNESDAHAFDEEW 174
>AY848700-1|AAX46015.1| 200|Homo sapiens myeloid leukemia factor 1
variant 1 protein.
Length = 200
Score = 78.2 bits (184), Expect = 3e-14
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +1
Query: 535 KVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNVYTGDAEERQEFINLXXX 714
K+ N IKETRK ++DS +G +KMAIGHHI +R HVI++ +N TGD E QEFIN+
Sbjct: 63 KLERNFIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNES 122
Query: 715 XXXXFDREF 741
FD E+
Sbjct: 123 DAHAFDEEW 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,399,682
Number of Sequences: 237096
Number of extensions: 2502839
Number of successful extensions: 4783
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4783
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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