Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I12
         (743 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    22   5.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.2  

>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +1

Query: 496 NGKPQVYSSTSSTKVGPNGIKETRKTLQDSRTGTKKMAIGHHIGERGHVIEREQNV 663
           N K +    T   KV  + +KE    +  +R    ++A G    +R  ++ER Q +
Sbjct: 62  NKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQL 117


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 399 AFDESTF*RYGWWKYECRQLFQQQYRCD 482
           AF  + F R  +W+  CR+ F+ +   D
Sbjct: 360 AFYSADF-RLAFWRLTCRKCFKSRTNLD 386


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,543
Number of Sequences: 438
Number of extensions: 4855
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)