Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I11
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    27   0.10 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    27   0.18 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.55 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.8  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +2

Query: 269 YPYSKSIYDDPIAAAERITVPGYRYLPVHREIYGYSPRPIYAHNYPRSLDY 421
           +PY+ ++Y DP  AA  I       LP+H       P P+Y H+Y R   Y
Sbjct: 135 WPYA-AVYTDPAFAAS-IFHAAATSLPLHYP----PPPPVYTHHYARYHPY 179


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
 Frame = +1

Query: 10  DDSTSAR----PRHHTTLFNYDRYLTEYEHDID 96
           +D+ SA+    PRH + L N +  +T+YE D+D
Sbjct: 186 EDNISAKNPWFPRHASDLDNCNHLMTKYEPDLD 218


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +2

Query: 200 EDIRAEERYRPTRRSVF--PELLSTYPYSKSIYDDPIAAAERITVPGYRYLPVHREIYGY 373
           E+IR + R  PT    +  P + +T P     ++D +A  ER+ +PG  +    R  + Y
Sbjct: 22  ENIR-DRRVLPTVEPGYLRPLIPATAPQKPDKWEDVMADIERVIMPGVTHWHSPR-FHAY 79

Query: 374 SPRPIYAHNYP 406
            P    A++YP
Sbjct: 80  FPT---ANSYP 87


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 304 RCR*EDYGTRLPLPACPSRDLRLLPAPYLCPQLPSLSRLLQANPKSL 444
           RC   +    L  P CPS +  L     L   +P+LS +  A P +L
Sbjct: 83  RCNSRESSDSLVQPRCPSGESMLSERAALLRGVPTLSPVGVALPPTL 129


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = -3

Query: 203 LPNLLENARRTAKIWLSSTASRFCQSCLNVF*TFWRSMSCSYS 75
           LP   EN      I +S+   +   S  N F TFW+      S
Sbjct: 417 LPRYTENQLNYPGITVSNIEVQSQGSSKNTFNTFWQQSDVDLS 459


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,729
Number of Sequences: 336
Number of extensions: 3326
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)