Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I11
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.1  
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        24   4.9  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   6.5  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   6.5  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           23   8.6  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   8.6  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   8.6  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   8.6  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +1

Query: 1   RPADDSTSARPRHHTTLFNYDRYLTEYEHDIDRQNVQNTFRHDWQKRDAVEE--SQILAV 174
           RP D +  A   HH  + N  R L  +  +++ + ++ ++     +   V+E   Q+  +
Sbjct: 415 RPKDRNQPATLHHHQQVHNQQRILYCFCRNVECKELEKSYHTFGAQIADVDERIKQLDGL 474

Query: 175 LRAFSKRFGRHQSRGKVQAN 234
           L +  KR  R   + KV  N
Sbjct: 475 LASVRKRTERLNLKHKVVDN 494


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -2

Query: 144 VSFLPIMSKCVLNIL 100
           VS  P++S+C+LN++
Sbjct: 24  VSLAPVLSECLLNVI 38


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +3

Query: 261 CRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 404
           C P     + TTTL      LR   T T      +T        PTTT
Sbjct: 88  CEPQSPGDQTTTTLRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTT 135


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +3

Query: 261 CRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 404
           C P     + TTTL      LR   T T      +T        PTTT
Sbjct: 88  CEPQSPGDQTTTTLRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTT 135


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 276 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPR 380
           T  R T++L++PL   R+ +  T + +AR    P+
Sbjct: 90  TAGRSTSSLTVPLGTSRHASGGTVVRVARVVQHPK 124


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +3

Query: 264 RPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQPEKF 443
           + T  P+  T   +   R     AT T  ++ RS     A S+    + L ++TG+PE  
Sbjct: 558 KATSPPAVATPPSTSRARTATRTATTTTRAL-RSAKKEPAESLDMDGINLVMVTGEPEDE 616

Query: 444 KGVVQLKN 467
           K  +++++
Sbjct: 617 KHEIEIEH 624


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 217 LGSDVFRTF*RTHEGLPKSGFLRRRLVSANH 125
           L SDV   + R  + + K+ F  +R+V  NH
Sbjct: 523 LDSDVLIEYVRKRQTIAKTMFQEKRVVIENH 553


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 270 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALS 416
           T T +  TTT++        P T T ++  ++T T  A    TTT   S
Sbjct: 33  TTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTTTTTVAS 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,564
Number of Sequences: 2352
Number of extensions: 13901
Number of successful extensions: 46
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)