Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_I10
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 260 7e-70
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 128 5e-30
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 123 1e-28
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 80 1e-15
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 75 7e-14
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 29 4.5
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 5.9
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 5.9
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 5.9
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 28 5.9
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 260 bits (637), Expect = 7e-70
Identities = 126/208 (60%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
Frame = +1
Query: 88 AVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLV 267
AV G SVG++A +GVV+ATEN S+L D+ KVE I+ HIG VYSGMGPD+R+LV
Sbjct: 27 AVKNGQPSVGLRAKDGVVLATENVG-SVLTDDQP--KVEQISKHIGCVYSGMGPDFRILV 83
Query: 268 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEE--GRPY 441
+ARK+A +Y +MY E +PT QLV +A VMQEYTQSGGVRPFG SLLI GW++ GRP
Sbjct: 84 KKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPL 143
Query: 442 LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTA 621
LFQCDPSGAYFAWKATA+GKN N KTFLEKR++E LELDD +HTA+LTL+E F+ M
Sbjct: 144 LFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALLTLRESFDVGMNE 203
Query: 622 DNIXVGICDASGFRRLXPAHVKDYLANI 705
+N+ V +C+++GF RL V D+L +
Sbjct: 204 NNVEVAVCNSTGFHRLTKQQVHDHLGTL 231
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 15 ERYSFSLTTFSPSGKLVQIEYAL 83
+ Y FSLTTFSPSGKL+QIEYAL
Sbjct: 3 DHYGFSLTTFSPSGKLMQIEYAL 25
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 128 bits (308), Expect = 5e-30
Identities = 60/161 (37%), Positives = 100/161 (62%), Gaps = 1/161 (0%)
Frame = +1
Query: 88 AVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLV 267
AV G T+VG++ + +VI E K L D+ ++ K+ MI H+ + ++G+ D R+LV
Sbjct: 26 AVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLV 85
Query: 268 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWE-EGRPYL 444
+AR Q Y L +P+ A + + +A Q +TQS G RPFG+S+LI G++ +G P L
Sbjct: 86 DRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRL 145
Query: 445 FQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDA 567
F+ +PSGAY+ + A A G+ + +LE++Y+E+ +D+A
Sbjct: 146 FKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEA 186
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 18 RYSFSLTTFSPSGKLVQIEYA 80
RY ++T FSP G L Q+EYA
Sbjct: 3 RYDRAITIFSPDGHLFQVEYA 23
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 123 bits (297), Expect = 1e-28
Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Frame = +1
Query: 88 AVAAGGTSVGIKASNGVVIATENKH-KSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLL 264
A++ GT +GI +S G+V+A E K+ +L D KV ++ +I +G+ D +L
Sbjct: 27 AISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANIL 86
Query: 265 VTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPY- 441
+ R A Y Y E +P QLVQ + Q YTQ GG RPFGVSLL GW++ Y
Sbjct: 87 INHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQ 146
Query: 442 LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTA 621
L+Q DPSG Y WKAT +G N T L++ Y + L++A AI L + + ++ +
Sbjct: 147 LYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEY-KSPNLEEAKQLAIKVLWKTLDVKLAS 205
Query: 622 DNIXVGI 642
+ + + +
Sbjct: 206 EKVEMAV 212
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 12 SERYSFSLTTFSPSGKLVQIEYAL 83
+ RY T FSP G+L Q+EYA+
Sbjct: 2 ARRYDSRTTIFSPEGRLYQVEYAM 25
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 106 bits (255), Expect = 1e-23
Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Frame = +1
Query: 88 AVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLV 267
AV G TS+GIK S GV++A E + S L ++ K+ + HIG+ ++G+ D R LV
Sbjct: 30 AVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLV 89
Query: 268 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEY----TQSGGVRPFGVSLLICGWEEGR 435
+A+ AQ ++ Y+ I + Q VA + ++ ++ RPFGV++L G ++
Sbjct: 90 ERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEG 149
Query: 436 PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQM 615
LF DPSG + KA ++G + + L+++Y + L + + + A+ LK+ E ++
Sbjct: 150 AKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAILKQVMEEKL 209
Query: 616 TADNIXV 636
+ N+ V
Sbjct: 210 NSANVEV 216
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 6 MASERYSFSLTTFSPSGKLVQIEYAL 83
+ Y + TFSP G+L Q+EYA+
Sbjct: 3 LTRSEYDRGVNTFSPEGRLFQVEYAI 28
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 80.2 bits (189), Expect = 1e-15
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 5/211 (2%)
Frame = +1
Query: 88 AVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLV 267
A+ G +VGIK+ VI + ++ L H KV I H G+ +G+ D R+L
Sbjct: 28 AMKQGSATVGIKSETHAVIVALKRAQNDL-SSHQ-KKVYEIDTHAGVSIAGLLSDGRILA 85
Query: 268 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPYLF 447
+ + Y + +P +L + + +Q TQ G RPFGV +LI G+++ ++
Sbjct: 86 RYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKDGAHII 145
Query: 448 QCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT--EDLELDDAVHTAILTLKEGF--EGQM 615
Q DPS + T++G + +T+LE+ E + + A+L L++ E +
Sbjct: 146 QTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLALRDTLPAEENL 205
Query: 616 TADNIXVGICDA-SGFRRLXPAHVKDYLANI 705
A N +GI S F L A V +L +
Sbjct: 206 NAQNTSIGIVGKDSPFSLLEDAQVAVHLNQV 236
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 6 MASERYSFSLTTFSPSGKLVQIEYAL 83
M +Y +T +SP G+L Q+EYA+
Sbjct: 1 MFRNQYDGDVTVWSPQGRLHQVEYAV 26
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 79.8 bits (188), Expect = 2e-15
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Frame = +1
Query: 88 AVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLV 267
AV GT + I+ NGVV+ + S LY +++ ++ + ++G+ +G PD L
Sbjct: 30 AVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALK 89
Query: 268 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGW-EEGRPYL 444
A A ++ Y EP+P + VA + +T G RPFG W ++ L
Sbjct: 90 NYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LGISRPFGAGAFFMSWNKQTGGRL 148
Query: 445 FQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTA 579
F +PSG + +KA A+GK+ K +EK E+L+++ V A
Sbjct: 149 FLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQLVKEA 193
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 21 YSFSLTTFSPSGKLVQIEYA 80
Y + +TFSP G++ Q+EYA
Sbjct: 8 YDLAASTFSPDGRIFQVEYA 27
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 74.5 bits (175), Expect = 7e-14
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Frame = +1
Query: 106 TSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKM 285
T+V +K ++ VIA + + L +V V I+ +G GM PD + + +A+
Sbjct: 38 TAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGE 97
Query: 286 AQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGR-PYLFQCDPS 462
A + +P L +++A + Q YTQ+ +R G +LL +++ + P +++ DP+
Sbjct: 98 AASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPA 157
Query: 463 GAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL--DDAVHTAILTLKEGFEGQMTADNIXV 636
G Y K ++G +FLEK+ + EL +A+ AI L+ + + ++ V
Sbjct: 158 GYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEV 217
Query: 637 GIC--DASGFRRLXPAHVKDYLANI 705
+ D S F +L V+ +L I
Sbjct: 218 VVVTKDNSKFTKLTSDQVEHHLNQI 242
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 44.8 bits (101), Expect = 6e-05
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 3/181 (1%)
Frame = +1
Query: 94 AAGGTSVGIKASNGVVIATENKHKS--ILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLV 267
+ G T V + G+V+ +++ + I+ D+H KV +T I +G D +
Sbjct: 44 STGTTIVAVAFKGGLVMGADSRATAGNIIADKHC-EKVHKLTESIYACGAGTAAD----L 98
Query: 268 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPF-GVSLLICGWEEGRPYL 444
Q KM + + T + + + + Q + + G LLI G + P+L
Sbjct: 99 DQVTKMLSGNLRLLE--LNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDPTGPHL 156
Query: 445 FQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTAD 624
+ C +G A+ TA G T LE+ + D+ D+A L+ G G +
Sbjct: 157 YMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKLVQRALEAGMHGDNASG 216
Query: 625 N 627
N
Sbjct: 217 N 217
>Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical
protein K05D4.8 protein.
Length = 320
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 630 YVICSHLTLKTFLKGQDSGVNCVI*LQVFCISFFKES 520
Y++C+H LKTF DS C ++FC F K S
Sbjct: 270 YLVCNHRNLKTFFDSIDSRNVC----KLFCCPFSKGS 302
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 154 NKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYR 258
N++ +L H +NK M ++ M++ M PDY+
Sbjct: 315 NRYMELLSLCHIINKTNMDLQYVSMMFQFMDPDYK 349
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 154 NKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYR 258
N++ +L H +NK M ++ M++ M PDY+
Sbjct: 315 NRYMELLSLCHIINKTNMDLQYVSMMFQFMDPDYK 349
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 319 SAHDTSRSTAGPSSLLESPVNDSLDPFPSKP 227
S HD +RS+ G + P D+ +P P P
Sbjct: 2 STHDDTRSSGGGDGTIHIPSADAKEPTPESP 32
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 319 SAHDTSRSTAGPSSLLESPVNDSLDPFPSKP 227
S HD +RS+ G + P D+ +P P P
Sbjct: 110 STHDDTRSSGGGDGTIHIPSADAKEPTPESP 140
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 319 SAHDTSRSTAGPSSLLESPVNDSLDPFPSKP 227
S HD +RS+ G + P D+ +P P P
Sbjct: 110 STHDDTRSSGGGDGTIHIPSADAKEPTPESP 140
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 319 SAHDTSRSTAGPSSLLESPVNDSLDPFPSKP 227
S HD +RS+ G + P D+ +P P P
Sbjct: 110 STHDDTRSSGGGDGTIHIPSADAKEPTPESP 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,694,218
Number of Sequences: 27780
Number of extensions: 385669
Number of successful extensions: 1051
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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