Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I08
         (817 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Y891 Cluster: Putative uncharacterized protein; n=2; ...    33   6.5  
UniRef50_Q8A4W0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q4Y891 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium chabaudi
          Length = 481

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 389 NFQNNVIF*FHSYFLNDKNCIYNTINTFEYQVN*DK--EKTINQNNIGN*LF 538
           +F   +++  ++Y  NDKNC YN +N   Y+ N     ++  N N I N +F
Sbjct: 298 SFYKLLLYNENNYIYNDKNCNYNNVNINPYENNNYSRLKRKSNNNGIANYVF 349


>UniRef50_Q8A4W0 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides thetaiotaomicron|Rep: Putative
           uncharacterized protein - Bacteroides thetaiotaomicron
          Length = 62

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 198 FCLSYFXFQIFFLRXYTFCLGVYINL 121
           FCL YF F + + + Y FCL V+ N+
Sbjct: 9   FCLVYFLFLVVYQKKYLFCLHVFQNM 34


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,562,745
Number of Sequences: 1657284
Number of extensions: 9028517
Number of successful extensions: 15504
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15499
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)