Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_I07
(816 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0017 + 11677029-11677100,11677992-11678030,11678169-116783... 81 1e-15
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 78 1e-14
05_01_0120 - 828834-831143 74 1e-13
12_01_0219 - 1651833-1651987,1652172-1652471,1652889-1652967,165... 55 6e-08
11_01_0217 - 1698721-1698875,1699122-1699421,1699840-1699918,169... 55 6e-08
06_02_0081 - 11527339-11527652,11528166-11528272,11528361-115284... 43 3e-04
01_06_0649 + 30861946-30862179,30862702-30862824,30863104-308631... 41 0.001
05_06_0131 - 25888434-25888931,25889105-25889155,25889249-258893... 39 0.005
11_01_0077 - 602192-602395,602477-602647,603161-603366,605457-60... 37 0.022
12_01_0078 - 639421-639624,639706-639876,640392-640597,640985-64... 36 0.039
01_04_0135 - 16494605-16494618,16494676-16494829 35 0.089
02_05_0549 + 29900714-29900953,29902224-29902323,29902578-299027... 27 0.14
12_01_0584 - 4762476-4762613,4763986-4764075,4765048-4765146,476... 29 3.3
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572... 28 7.7
02_02_0429 - 10135695-10135769,10135872-10135972,10138416-101385... 28 7.7
>01_03_0017 + 11677029-11677100,11677992-11678030,11678169-11678341,
11679068-11679284,11679518-11679688,11679781-11679941,
11680025-11681069,11681320-11681466,11681547-11681774,
11681863-11682020,11682124-11682493
Length = 926
Score = 80.6 bits (190), Expect = 1e-15
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Frame = +2
Query: 332 VYPGLFVGDAVAAKDKAFLRRMGINYVLNTAEGKRYTQVDTDHLYYRDCPGLRYKGFQLM 511
V LF+G A+AA+ L+ +GI ++L + Q D+ + D YK F +
Sbjct: 700 VINNLFIGGALAARSMYTLQHLGITHILCLCSNE-IGQSDSQ---FPDL--FEYKNFSIS 753
Query: 512 DLPTTDISKYFHIAANFIDEGVSSGGRVLVHCMMGVSRSATCALAFLMIKRGMSLTEALC 691
D +IS F A+++ D GG+VLVHC G SRSAT LA+LM+++G++L +A
Sbjct: 754 DDDDANISDLFEEASDYFDHVDHVGGKVLVHCFEGKSRSATIVLAYLMLRKGLTLAKAWN 813
Query: 692 TV-RARRDIHPNDGF 733
+ + R PNDGF
Sbjct: 814 LLKKVHRRAQPNDGF 828
>01_03_0205 + 13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 77.8 bits (183), Expect = 1e-14
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 LFVGDAVAAKDKAFLRRMGINYVLNTAEGKRYTQVDTDHLYYRDCPGLRYKGFQLMDLPT 523
L++G A+AA+ L+ +GI +VL + Q ++ D Y+ F + D
Sbjct: 631 LYIGGALAARSTYTLKHLGITHVLCLCANE-IGQAESQQPDRFD-----YQNFSINDDEN 684
Query: 524 TDISKYFHIAANFIDEGVSSGGRVLVHCMMGVSRSATCALAFLMIKRGMSLTEALCTV-R 700
DIS F A++FID G+VLVHC G SRSAT LA+LM+++ +L EA + +
Sbjct: 685 ADISDVFQDASDFIDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFTLLEAWNMLKK 744
Query: 701 ARRDIHPNDGF 733
R HPNDGF
Sbjct: 745 VHRRAHPNDGF 755
>05_01_0120 - 828834-831143
Length = 769
Score = 74.1 bits (174), Expect = 1e-13
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = +2
Query: 320 DVNEVYPGLFVGDAVAAKDKAFLRRMGINYVLNTAEGKRYTQVDTDHLYYRDCPGLRYKG 499
+ ++V +++G AK++ LR+ GI +VLN G + Y++ L Y+
Sbjct: 144 ECSKVADHVYLGGDAVAKNRDILRKNGITHVLNCV-GFVCPE------YFKS--DLVYRT 194
Query: 500 FQLMDLPTTDISKYFHIAANFIDEGVSSGGRVLVHCMMGVSRSATCALAFLMIKRGMSLT 679
L D PT DI+ + ++ ++ GGRV VHC GVSRS + +A+LM + G S
Sbjct: 195 LWLQDSPTEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFD 254
Query: 680 EALCTVRARRDI-HPNDGF 733
+A V+A R I +PN GF
Sbjct: 255 DAFQLVKAARGIANPNMGF 273
>12_01_0219 -
1651833-1651987,1652172-1652471,1652889-1652967,
1653047-1653111,1653236-1653288,1653666-1654084
Length = 356
Score = 55.2 bits (127), Expect = 6e-08
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 506 LMDLPTTDISKYFHIAANFIDEGVSSGGRVLVHCMMGVSRSATCALAFLMIKRGMSLTEA 685
L D ++ + +FIDEG G VLVHC GVSRSAT +A+LM SL EA
Sbjct: 101 LRDTEEENLLDHLEPCLDFIDEGRKEGN-VLVHCFAGVSRSATIIVAYLMRTEQKSLEEA 159
Query: 686 LCTVR-ARRDIHPNDGF 733
L +++ PNDGF
Sbjct: 160 LESLKEVNESACPNDGF 176
>11_01_0217 -
1698721-1698875,1699122-1699421,1699840-1699918,
1699998-1700062,1700187-1700239,1700654-1701072
Length = 356
Score = 55.2 bits (127), Expect = 6e-08
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 506 LMDLPTTDISKYFHIAANFIDEGVSSGGRVLVHCMMGVSRSATCALAFLMIKRGMSLTEA 685
L D ++ + +FIDEG G VLVHC GVSRSAT +A+LM SL EA
Sbjct: 101 LRDTEEENLLDHLEPCLDFIDEGRKEGN-VLVHCFAGVSRSATIIVAYLMRTEQKSLEEA 159
Query: 686 LCTVR-ARRDIHPNDGF 733
L +++ PNDGF
Sbjct: 160 LESLKEVNESACPNDGF 176
>06_02_0081 -
11527339-11527652,11528166-11528272,11528361-11528418,
11529240-11529267,11530233-11530499
Length = 257
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2
Query: 590 RVLVHCMMGVSRSATCALAFLMIKRGMSLTEALCTVRARR 709
RVLVHCM G SRSA +AFLM +G L++ V+ RR
Sbjct: 107 RVLVHCMSGKSRSAAFVIAFLMKTKGWRLSQCFQWVKERR 146
>01_06_0649 +
30861946-30862179,30862702-30862824,30863104-30863197,
30863819-30863901,30863984-30864073,30864176-30864562,
30864903-30864991,30867801-30867907,30868431-30868822
Length = 532
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = +2
Query: 551 AANFIDEGVSSGGRVLVHCMMGVSRSATCALAFLMIKRGMSLTEALCTVRARR 709
A +FI S GG VHC G RS T L +L+ R MS AL VR+ R
Sbjct: 145 AIDFIHRNASEGGITYVHCKAGRGRSTTIVLCYLIKYRSMSPEAALDHVRSIR 197
>05_06_0131 -
25888434-25888931,25889105-25889155,25889249-25889331,
25889733-25889826,25890188-25890310,25890909-25891154
Length = 364
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 551 AANFIDEGVSSGGRVLVHCMMGVSRSATCALAFLMIKRGMSLTEALCTVRARRDIHPN 724
A +FI S GG VHC G RS T L +L+ R M+ AL R+ + N
Sbjct: 149 AVDFIHRNASQGGSTYVHCKAGRGRSTTIVLCYLIKYRNMTPEAALDHARSAVKLFSN 206
>11_01_0077 -
602192-602395,602477-602647,603161-603366,605457-605682
Length = 268
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 551 AANFIDEGVSSG-GRVLVHCMMGVSRSATCALAFLMIKRGMSLTEALCTVRARRDIHPN 724
A + ++ +S G GRV VHC G+ R+ A+A++ M L A + ++R PN
Sbjct: 160 AVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYMFWFENMDLRTAYEKLTSKRPCGPN 218
>12_01_0078 -
639421-639624,639706-639876,640392-640597,640985-641100,
641669-641855,642104-642338
Length = 372
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 563 IDEGVSSG-GRVLVHCMMGVSRSATCALAFLMIKRGMSLTEALCTVRARRDIHPN 724
++ +S G GRV VHC G+ R+ A+A++ M+L A + ++R PN
Sbjct: 268 LEWAISEGKGRVYVHCTAGLGRAPAVAIAYMFWFENMNLKTAYEKLTSKRPCGPN 322
>01_04_0135 - 16494605-16494618,16494676-16494829
Length = 55
Score = 34.7 bits (76), Expect = 0.089
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 626 SATCALAFLMIKRGMSLTEALCTVRARR-DIHPNDGF 733
S T +A+LM K MSL AL VR++R + PN+GF
Sbjct: 3 SVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEGF 39
>02_05_0549 +
29900714-29900953,29902224-29902323,29902578-29902719,
29902720-29902826,29903179-29903480
Length = 296
Score = 26.6 bits (56), Expect(2) = 0.14
Identities = 26/94 (27%), Positives = 37/94 (39%)
Frame = +2
Query: 344 LFVGDAVAAKDKAFLRRMGINYVLNTAEGKRYTQVDTDHLYYRDCPGLRYKGFQLMDLPT 523
LF+G A L+ + I ++LNT DC L F +
Sbjct: 56 LFLGSYNNASRSEVLKTLSITHILNTVP---------------DCQNLYRNSFTYHCIQD 100
Query: 524 TDISKYFHIAANFIDEGVSSGGRVLVHCMMGVSR 625
+ S F A F+++ RVLVHCM G +R
Sbjct: 101 -ERSLDFDGANRFLEQCERETSRVLVHCMSGKNR 133
Score = 26.2 bits (55), Expect(2) = 0.14
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 617 VSRSATCALAFLMIKRGMSLTEALCTVRARR 709
+SRSA + +LM RG L+++ V+ RR
Sbjct: 159 ISRSAAIVIGYLMKSRGWRLSQSYQWVKDRR 189
>12_01_0584 -
4762476-4762613,4763986-4764075,4765048-4765146,
4766032-4766154,4766243-4766405,4767307-4767356,
4767826-4767942,4769477-4769683,4769763-4769900,
4771212-4771274,4771358-4771441,4771933-4772084,
4772219-4772357,4772814-4772924
Length = 557
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 593 VLVHCMMGVSRSATCALAFLMIKRGMSLTEALCTVRARR--DIHPND 727
+LVHC G +R+ + +LM + S+TEAL RR I+ ND
Sbjct: 200 ILVHCTHGHNRTGFMIVHYLMRTQLSSVTEALNIFAQRRPPGIYKND 246
>05_05_0334 +
24156532-24156565,24156681-24156782,24157145-24157274,
24157361-24157445,24157525-24157666,24157762-24157894,
24157993-24158254,24158331-24158519,24158596-24158721,
24158809-24159195,24159288-24159398,24159629-24160423,
24161114-24161255,24161350-24162518,24162609-24162818,
24163010-24163478,24164037-24164464
Length = 1637
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 529 ISSWKIHKLKTFISQTRTVSVVEMICV 449
I SWK+H L+ F++ VVE I V
Sbjct: 909 ILSWKLHPLEQFLTPDEKYEVVEQIMV 935
>02_02_0429 -
10135695-10135769,10135872-10135972,10138416-10138532,
10138810-10139041,10142326-10142442,10142762-10142827
Length = 235
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 338 PGLFVGDAVAAKDKAFLRRMG--INYVLNTAEGKRYTQVDTDHLYYRDC 478
P + + + KD AFLRR+G N+++ +G + D LY+ C
Sbjct: 173 PEIHLYHLLPRKDLAFLRRLGHRDNHLVIRVDGAKELHFGVDILYHMSC 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,081,808
Number of Sequences: 37544
Number of extensions: 355741
Number of successful extensions: 792
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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