Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I05
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.3  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    21   5.8  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   7.7  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.7  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   7.7  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   7.7  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   7.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 211 LRDEISKYPSTPQ 173
           LRD++ +YPS P+
Sbjct: 30  LRDDVERYPSGPE 42


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 107 CHLMVQAFSCAVMINGRCGY 48
           CH +V +FSC+   +G  GY
Sbjct: 237 CHDLVNSFSCSCP-SGTLGY 255


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +3

Query: 159 SWGPDWGVEGYLLISSRNNNCGIATEPTYVVY 254
           ++  DWG        S  NNC    E   ++Y
Sbjct: 22  NFSTDWGKRSGSSAGSDANNCKEPVETIMLIY 53


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 87  RLNHEMALVGYGERDG 134
           R NH   ++GY  R+G
Sbjct: 305 RYNHVPIMIGYTTREG 320


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 87  RLNHEMALVGYGERDG 134
           R NH   ++GY  R+G
Sbjct: 305 RYNHVPIMIGYTTREG 320


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 87  RLNHEMALVGYGERDG 134
           R NH   ++GY  R+G
Sbjct: 305 RYNHVPIMIGYTTREG 320


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 87  RLNHEMALVGYGERDG 134
           R NH   ++GY  R+G
Sbjct: 305 RYNHVPIMIGYTTREG 320


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 87  RLNHEMALVGYGERDG 134
           R NH   ++GY  R+G
Sbjct: 304 RYNHVPIMIGYTTREG 319


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 259 TIREFIGLNKLKKHEIWIRLSLII*CEMNYKYI 357
           T  EFI ++        IRL++   C MN +Y+
Sbjct: 142 TSNEFIRVHHSGSITRSIRLTITASCPMNLQYL 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,784
Number of Sequences: 336
Number of extensions: 1309
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)