Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_I02
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB037729-1|BAA92546.1|  745|Homo sapiens KIAA1308 protein protein.     32   1.5  
AF448856-1|AAP41924.1|  303|Homo sapiens hypothetical protein pr...    30   4.5  

>AB037729-1|BAA92546.1|  745|Homo sapiens KIAA1308 protein protein.
          Length = 745

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +1

Query: 49  REVRRCPXPLWPSPGPAITPTSHTASRILTLATSRTRWRAVWETT*RVSTRCWSLTVLAG 228
           ++V  CP P +P P P  + + H A +   L T+  R+  +W+      T  W L +L  
Sbjct: 532 KKVTACPSPQYPFPSPH-SKSMHGARKPWILNTASRRF-PIWQLAWGAPTGQWDLLILPS 589

Query: 229 RS 234
            S
Sbjct: 590 PS 591


>AF448856-1|AAP41924.1|  303|Homo sapiens hypothetical protein
           protein.
          Length = 303

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 73  PLW-PSPGPAITPTSHTASRILTLATSRTRWR 165
           PLW P+P P + P +H AS +   A     WR
Sbjct: 87  PLWNPNPEPGVRPVAHPASGLEHAAVCPRAWR 118


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,581,148
Number of Sequences: 237096
Number of extensions: 1022809
Number of successful extensions: 7565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7561
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)